RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 BTBD11A6QL63 1104 aa15.13■□□□□ 0.01
SPARC-207ENST00000537849 ERVV-2B6SEH9 535 aa15.13■□□□□ 0.01
SPARC-207ENST00000537849 PLIN1O60240 522 aa15.13■□□□□ 0.01
SPARC-207ENST00000537849 FKBP8Q14318 412 aa15.13■□□□□ 0.01
SPARC-207ENST00000537849 TWISTNBQ3B726 338 aaPredicted RBP15.13■□□□□ 0.01
SPARC-207ENST00000537849 SSH1Q8WYL5 1049 aa15.13■□□□□ 0.01
SPARC-207ENST00000537849 ZNF428Q96B54 188 aa15.13■□□□□ 0.01
SPARC-207ENST00000537849 KAT6BQ8WYB5 2073 aa15.12■□□□□ 0.01
SPARC-207ENST00000537849 KDM3BQ7LBC6 1761 aa15.12■□□□□ 0.01
SPARC-207ENST00000537849 EIF4A1P60842 406 aaKnown RBP15.12■□□□□ 0.01
SPARC-207ENST00000537849 ALDH1L2Q3SY69 923 aa15.12■□□□□ 0.01
SPARC-207ENST00000537849 BRPF1P55201 1214 aaPredicted RBP15.11■□□□□ 0.01
SPARC-207ENST00000537849 IRX6P78412 446 aaPredicted RBP15.11■□□□□ 0.01
SPARC-207ENST00000537849 ONECUT3O60422 494 aaPredicted RBP15.1■□□□□ 0.01
SPARC-207ENST00000537849 NEFLP07196 543 aa15.1■□□□□ 0.01
SPARC-207ENST00000537849 CABP4P57796 275 aa15.1■□□□□ 0.01
SPARC-207ENST00000537849 DDB1Q16531 1140 aa15.1■□□□□ 0.01
SPARC-207ENST00000537849 FAM98CQ17RN3 349 aaKnown RBP15.1■□□□□ 0.01
SPARC-207ENST00000537849 GJD4Q96KN9 370 aaPredicted RBP15.1■□□□□ 0.01
SPARC-207ENST00000537849 HEG1Q9ULI3 1381 aa15.1■□□□□ 0.01
SPARC-207ENST00000537849 ATRNO75882 1429 aa15.09■□□□□ 0.01
SPARC-207ENST00000537849 MRC1P22897 1456 aa15.09■□□□□ 0.01
SPARC-207ENST00000537849 MRPL50Q8N5N7 158 aaKnown RBP15.09■□□□□ 0.01
SPARC-207ENST00000537849 MARCH10Q8NA82 808 aaPredicted RBP15.09■□□□□ 0.01
SPARC-207ENST00000537849 QTRT2Q9H974 415 aaKnown RBP15.09■□□□□ 0.01
SPARC-207ENST00000537849 TRPC5Q9UL62 973 aaPredicted RBP15.09■□□□□ 0.01
SPARC-207ENST00000537849 TNS2Q63HR2 1409 aa15.09■□□□□ 0.01
SPARC-207ENST00000537849 SLC39A6Q13433 755 aa15.08■□□□□ 0
SPARC-207ENST00000537849 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.08■□□□□ 0
SPARC-207ENST00000537849 BCL2L13Q9BXK5 485 aa15.08■□□□□ 0
SPARC-207ENST00000537849 SOS1Q07889 1333 aaPredicted RBP15.08■□□□□ 0
SPARC-207ENST00000537849 C20orf194Q5TEA3 1177 aa15.07■□□□□ 0
SPARC-207ENST00000537849 ZNF790Q6PG37 636 aa15.07■□□□□ 0
SPARC-207ENST00000537849 SMC4Q9NTJ3 1288 aa15.07■□□□□ 0
SPARC-207ENST00000537849 ITGB4P16144 1822 aa15.07■□□□□ 0
SPARC-207ENST00000537849 CACNA1FO60840 1977 aa15.07■□□□□ 0
SPARC-207ENST00000537849 GLI3P10071 1580 aa15.07■□□□□ 0
SPARC-207ENST00000537849 TOGARAM1Q9Y4F4 1720 aa15.06■□□□□ 0
SPARC-207ENST00000537849 TCERG1O14776 1098 aaKnown RBP15.06■□□□□ 0
SPARC-207ENST00000537849 ERICH6BQ5W0A0 696 aa15.06■□□□□ 0
SPARC-207ENST00000537849 GIGYF1O75420 1035 aaPredicted RBP15.05■□□□□ -0
SPARC-207ENST00000537849 HOXB7P09629 217 aa15.05■□□□□ -0
SPARC-207ENST00000537849 PIGBQ92521 554 aa15.05■□□□□ -0
SPARC-207ENST00000537849 NOB1Q9ULX3 412 aaKnown RBP15.05■□□□□ -0
SPARC-207ENST00000537849 PDE3AQ14432 1141 aa15.04■□□□□ -0
SPARC-207ENST00000537849 FRAT1Q92837 279 aaPredicted RBP15.04■□□□□ -0
SPARC-207ENST00000537849 TNNQ9UQP3 1299 aa15.04■□□□□ -0
SPARC-207ENST00000537849 THSD7AQ9UPZ6 1657 aa15.03■□□□□ -0
SPARC-207ENST00000537849 PRIM1P49642 420 aaKnown RBP15.03■□□□□ -0
SPARC-207ENST00000537849 ZNF496Q96IT1 587 aaPredicted RBP15.03■□□□□ -0
SPARC-207ENST00000537849 IPO8O15397 1037 aaKnown RBP15.02■□□□□ -0
SPARC-207ENST00000537849 SLC4A2P04920 1241 aa15.02■□□□□ -0
SPARC-207ENST00000537849 CCDC30Q5VVM6 783 aa15.02■□□□□ -0
SPARC-207ENST00000537849 ZKSCAN2Q63HK3 967 aa15.02■□□□□ -0
SPARC-207ENST00000537849 EXOC6Q8TAG9 804 aa15.02■□□□□ -0
SPARC-207ENST00000537849 ARHGAP45Q92619 1136 aa15.02■□□□□ -0
SPARC-207ENST00000537849 TMOD3Q9NYL9 352 aa15.02■□□□□ -0
SPARC-207ENST00000537849 PRAMEF22A3QJZ6 481 aa15.01□□□□□ -0.01
SPARC-207ENST00000537849 ATF7IPQ6VMQ6 1270 aa15.01□□□□□ -0.01
SPARC-207ENST00000537849 PANK1Q8TE04 598 aa15.01□□□□□ -0.01
SPARC-207ENST00000537849 FMNL2Q96PY5 1086 aa15.01□□□□□ -0.01
SPARC-207ENST00000537849 CRBNQ96SW2 442 aa15.01□□□□□ -0.01
SPARC-207ENST00000537849 ATG3Q9NT62 314 aa15.01□□□□□ -0.01
SPARC-207ENST00000537849 BCL9O00512 1426 aa15□□□□□ -0.01
SPARC-207ENST00000537849 RLBP1P12271 317 aa15□□□□□ -0.01
SPARC-207ENST00000537849 TRIM27P14373 513 aa15□□□□□ -0.01
SPARC-207ENST00000537849 EIF2S2P20042 333 aaKnown RBP15□□□□□ -0.01
SPARC-207ENST00000537849 ZNF772Q68DY9 489 aaPredicted RBP15□□□□□ -0.01
SPARC-207ENST00000537849 G2E3Q7L622 706 aa15□□□□□ -0.01
SPARC-207ENST00000537849 SEPT12Q8IYM1 358 aa15□□□□□ -0.01
SPARC-207ENST00000537849 TTC5Q8N0Z6 440 aa15□□□□□ -0.01
SPARC-207ENST00000537849 NECTIN2Q92692 538 aa15□□□□□ -0.01
SPARC-207ENST00000537849 CHMP4AQ9BY43 222 aa15□□□□□ -0.01
SPARC-207ENST00000537849 ASAP1Q9ULH1 1129 aa15□□□□□ -0.01
SPARC-207ENST00000537849 PAPPAQ13219 1627 aa14.99□□□□□ -0.01
SPARC-207ENST00000537849 KIF16BQ96L93 1317 aa14.99□□□□□ -0.01
SPARC-207ENST00000537849 UBR2Q8IWV8 1755 aa14.99□□□□□ -0.01
SPARC-207ENST00000537849 SNRPA1P09661 255 aaKnown RBP14.99□□□□□ -0.01
SPARC-207ENST00000537849 HDGFL1Q5TGJ6 251 aa14.99□□□□□ -0.01
SPARC-207ENST00000537849 USP16Q9Y5T5 823 aa14.99□□□□□ -0.01
SPARC-207ENST00000537849 MS4A1P11836 297 aa14.98□□□□□ -0.01
SPARC-207ENST00000537849 CANXP27824 592 aaKnown RBP14.98□□□□□ -0.01
SPARC-207ENST00000537849 DZIP1LQ8IYY4 767 aaKnown RBP14.98□□□□□ -0.01
SPARC-207ENST00000537849 ACSBG1Q96GR2 724 aa14.98□□□□□ -0.01
SPARC-207ENST00000537849 RGS17Q9UGC6 210 aaPredicted RBP14.98□□□□□ -0.01
SPARC-207ENST00000537849 DOT1LQ8TEK3 1739 aa14.97□□□□□ -0.01
SPARC-207ENST00000537849 KCPQ6ZWJ8 1503 aa14.97□□□□□ -0.01
SPARC-207ENST00000537849 A0A0G2JS52 829 aa14.97□□□□□ -0.01
SPARC-207ENST00000537849 KCNQ2O43526 872 aa14.97□□□□□ -0.01
SPARC-207ENST00000537849 RBM6P78332 1123 aaKnown RBP14.97□□□□□ -0.01
SPARC-207ENST00000537849 MYT1Q01538 1121 aa14.97□□□□□ -0.01
SPARC-207ENST00000537849 PDIA6Q15084 440 aa14.97□□□□□ -0.01
SPARC-207ENST00000537849 CLUAP1Q96AJ1 413 aa14.97□□□□□ -0.01
SPARC-207ENST00000537849 STK31Q9BXU1 1019 aa14.97□□□□□ -0.01
SPARC-207ENST00000537849 PPP4R2Q9NY27 417 aa14.97□□□□□ -0.01
SPARC-207ENST00000537849 C5P01031 1676 aa14.97□□□□□ -0.01
SPARC-207ENST00000537849 PTCD1O75127 700 aaKnown RBP14.96□□□□□ -0.01
SPARC-207ENST00000537849 API5Q9BZZ5 524 aaKnown RBP14.96□□□□□ -0.01
SPARC-207ENST00000537849 COG6Q9Y2V7 657 aa14.96□□□□□ -0.01
SPARC-207ENST00000537849 BRWD3Q6RI45 1802 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms