RNA–Protein interactions for RNA: ENST00000536797.5

LPCAT3-204, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,412 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-204ENST00000536797 KCNQ4P56696 695 aa27.8■■■□□ 2.04
LPCAT3-204ENST00000536797 RTF1Q92541 710 aaKnown RBP27.8■■■□□ 2.04
LPCAT3-204ENST00000536797 STK32BQ9NY57 414 aa27.8■■■□□ 2.04
LPCAT3-204ENST00000536797 IL17REQ8NFR9 667 aa27.79■■■□□ 2.04
LPCAT3-204ENST00000536797 DLG5Q8TDM6 1919 aa27.78■■■□□ 2.04
LPCAT3-204ENST00000536797 ADAMTS8Q9UP79 889 aa27.78■■■□□ 2.04
LPCAT3-204ENST00000536797 C5P01031 1676 aa27.77■■■□□ 2.04
LPCAT3-204ENST00000536797 HMGB2P26583 209 aaKnown RBP27.77■■■□□ 2.04
LPCAT3-204ENST00000536797 TEFQ10587 303 aa27.77■■■□□ 2.04
LPCAT3-204ENST00000536797 LOC102724428A0A0B4J2F2 783 aa27.76■■■□□ 2.04
LPCAT3-204ENST00000536797 HTATSF1O43719 755 aaKnown RBP27.76■■■□□ 2.04
LPCAT3-204ENST00000536797 SIK1P57059 783 aa27.76■■■□□ 2.04
LPCAT3-204ENST00000536797 NFE2L2Q16236 605 aa27.76■■■□□ 2.04
LPCAT3-204ENST00000536797 SLC15A2Q16348 729 aa27.76■■■□□ 2.04
LPCAT3-204ENST00000536797 CCDC184Q52MB2 194 aa27.76■■■□□ 2.04
LPCAT3-204ENST00000536797 CEMIPQ8WUJ3 1361 aa27.76■■■□□ 2.03
LPCAT3-204ENST00000536797 TAF1LQ8IZX4 1826 aa27.75■■■□□ 2.03
LPCAT3-204ENST00000536797 CCDC146Q8IYE0 955 aa27.75■■■□□ 2.03
LPCAT3-204ENST00000536797 MRS2Q9HD23 443 aa27.75■■■□□ 2.03
LPCAT3-204ENST00000536797 SIPA1L3O60292 1781 aaPredicted RBP27.74■■■□□ 2.03
LPCAT3-204ENST00000536797 RUNDC1Q96C34 613 aa27.74■■■□□ 2.03
LPCAT3-204ENST00000536797 RBM42Q9BTD8 480 aaKnown RBP27.74■■■□□ 2.03
LPCAT3-204ENST00000536797 ATP6V1AP38606 617 aa27.73■■■□□ 2.03
LPCAT3-204ENST00000536797 MCM10Q7L590 875 aa27.73■■■□□ 2.03
LPCAT3-204ENST00000536797 ZNF831Q5JPB2 1677 aa27.72■■■□□ 2.03
LPCAT3-204ENST00000536797 ZNF827Q17R98 1081 aa27.72■■■□□ 2.03
LPCAT3-204ENST00000536797 AKT1S1Q96B36 256 aa27.71■■■□□ 2.03
LPCAT3-204ENST00000536797 PTCD1O75127 700 aaKnown RBP27.7■■■□□ 2.03
LPCAT3-204ENST00000536797 DCTN1Q14203 1278 aa27.7■■■□□ 2.03
LPCAT3-204ENST00000536797 SLC39A6Q13433 755 aa27.69■■■□□ 2.02
LPCAT3-204ENST00000536797 C4BP0C0L5 1744 aa27.68■■■□□ 2.02
LPCAT3-204ENST00000536797 TMPOP42166 694 aaKnown RBP27.68■■■□□ 2.02
LPCAT3-204ENST00000536797 QSER1Q2KHR3 1735 aa27.68■■■□□ 2.02
LPCAT3-204ENST00000536797 RIPK4P57078 832 aa27.67■■■□□ 2.02
LPCAT3-204ENST00000536797 TTC5Q8N0Z6 440 aa27.67■■■□□ 2.02
LPCAT3-204ENST00000536797 ITPK1Q13572 414 aa27.67■■■□□ 2.02
LPCAT3-204ENST00000536797 SLC4A9Q96Q91 983 aa27.67■■■□□ 2.02
LPCAT3-204ENST00000536797 TFCP2L1Q9NZI6 479 aa27.67■■■□□ 2.02
LPCAT3-204ENST00000536797 TUBGCP6Q96RT7 1819 aa27.66■■■□□ 2.02
LPCAT3-204ENST00000536797 PNISRQ8TF01 805 aaKnown RBP27.66■■■□□ 2.02
LPCAT3-204ENST00000536797 UBR2Q8IWV8 1755 aa27.66■■■□□ 2.02
LPCAT3-204ENST00000536797 CASZ1Q86V15 1759 aa27.65■■■□□ 2.02
LPCAT3-204ENST00000536797 KCPQ6ZWJ8 1503 aa27.65■■■□□ 2.02
LPCAT3-204ENST00000536797 BTBD11A6QL63 1104 aa27.65■■■□□ 2.02
LPCAT3-204ENST00000536797 LMOD3Q0VAK6 560 aa27.65■■■□□ 2.02
LPCAT3-204ENST00000536797 LINC00116Q8NCU8 138 aa27.65■■■□□ 2.02
LPCAT3-204ENST00000536797 CICQ96RK0 1608 aaPredicted RBP27.64■■■□□ 2.02
LPCAT3-204ENST00000536797 ZNF790Q6PG37 636 aa27.64■■■□□ 2.02
LPCAT3-204ENST00000536797 AK7Q96M32 723 aa27.64■■■□□ 2.02
LPCAT3-204ENST00000536797 RRP7AQ9Y3A4 280 aaKnown RBP27.64■■■□□ 2.02
LPCAT3-204ENST00000536797 COL5A3P25940 1745 aaPredicted RBP27.64■■■□□ 2.01
LPCAT3-204ENST00000536797 NEUROD2Q15784 382 aa27.63■■■□□ 2.01
LPCAT3-204ENST00000536797 TJP1Q07157 1748 aa27.62■■■□□ 2.01
LPCAT3-204ENST00000536797 PNPLA7Q6ZV29 1317 aa27.6■■■□□ 2.01
LPCAT3-204ENST00000536797 TAF7Q15545 349 aaPredicted RBP27.6■■■□□ 2.01
LPCAT3-204ENST00000536797 PDGFDQ9GZP0 370 aaPredicted RBP27.6■■■□□ 2.01
LPCAT3-204ENST00000536797 THUMPD2Q9BTF0 503 aaKnown RBP27.59■■■□□ 2.01
LPCAT3-204ENST00000536797 UBR3Q6ZT12 1888 aa27.59■■■□□ 2.01
LPCAT3-204ENST00000536797 VSIG10Q8N0Z9 540 aa27.58■■■□□ 2.01
LPCAT3-204ENST00000536797 APAF1O14727 1248 aa27.58■■■□□ 2
LPCAT3-204ENST00000536797 DIEXFQ68CQ4 756 aaKnown RBP27.58■■■□□ 2
LPCAT3-204ENST00000536797 ZNF496Q96IT1 587 aaPredicted RBP27.57■■■□□ 2
LPCAT3-204ENST00000536797 FMNL2Q96PY5 1086 aa27.57■■■□□ 2
LPCAT3-204ENST00000536797 LRP5O75197 1615 aa27.56■■■□□ 2
LPCAT3-204ENST00000536797 CNTNAP4Q9C0A0 1308 aa27.56■■■□□ 2
LPCAT3-204ENST00000536797 DNAJC10Q8IXB1 793 aa27.56■■■□□ 2
LPCAT3-204ENST00000536797 FLAD1Q8NFF5 587 aa27.56■■■□□ 2
LPCAT3-204ENST00000536797 HEG1Q9ULI3 1381 aa27.55■■■□□ 2
LPCAT3-204ENST00000536797 GNPATO15228 680 aa27.55■■■□□ 2
LPCAT3-204ENST00000536797 KCNQ3O43525 872 aa27.55■■■□□ 2
LPCAT3-204ENST00000536797 RC3H1Q5TC82 1133 aaKnown RBP27.55■■■□□ 2
LPCAT3-204ENST00000536797 MSH5O43196 834 aa27.54■■■□□ 2
LPCAT3-204ENST00000536797 TRIM35Q9UPQ4 493 aa27.54■■■□□ 2
LPCAT3-204ENST00000536797 KDM3BQ7LBC6 1761 aa27.54■■■□□ 2
LPCAT3-204ENST00000536797 ZBTB7AO95365 584 aa27.53■■■□□ 2
LPCAT3-204ENST00000536797 SSFA2P28290 1259 aa27.53■■■□□ 2
LPCAT3-204ENST00000536797 COL23A1Q86Y22 540 aaPredicted RBP27.53■■■□□ 2
LPCAT3-204ENST00000536797 SPON1Q9HCB6 807 aa27.53■■■□□ 2
LPCAT3-204ENST00000536797 MIS18AQ9NYP9 233 aa27.53■■■□□ 2
LPCAT3-204ENST00000536797 MYH14Q7Z406 1995 aaKnown RBP27.53■■■□□ 2
LPCAT3-204ENST00000536797 PHF14O94880 888 aa27.52■■■□□ 2
LPCAT3-204ENST00000536797 CRKLP46109 303 aaKnown RBP27.52■■■□□ 2
LPCAT3-204ENST00000536797 FAM9BQ8IZU0 186 aa27.52■■■□□ 2
LPCAT3-204ENST00000536797 SLC16A10Q8TF71 515 aa27.52■■■□□ 2
LPCAT3-204ENST00000536797 MTFR1LQ9H019 292 aa27.52■■■□□ 2
LPCAT3-204ENST00000536797 SRCAPQ6ZRS2 3230 aa27.51■■□□□ 1.99
LPCAT3-204ENST00000536797 TEX13AQ9BXU3 409 aaPredicted RBP27.51■■□□□ 1.99
LPCAT3-204ENST00000536797 RTCBQ9Y3I0 505 aaKnown RBP27.51■■□□□ 1.99
LPCAT3-204ENST00000536797 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.5■■□□□ 1.99
LPCAT3-204ENST00000536797 AMIGO3Q86WK7 504 aa27.5■■□□□ 1.99
LPCAT3-204ENST00000536797 CYP19A1P11511 503 aaPredicted RBP27.5■■□□□ 1.99
LPCAT3-204ENST00000536797 CCER2I3L3R5 266 aa27.49■■□□□ 1.99
LPCAT3-204ENST00000536797 STARD3NLO95772 234 aa27.49■■□□□ 1.99
LPCAT3-204ENST00000536797 CCDC87Q9NVE4 849 aa27.49■■□□□ 1.99
LPCAT3-204ENST00000536797 RPS6KA4O75676 772 aa27.48■■□□□ 1.99
LPCAT3-204ENST00000536797 SMIM5Q71RC9 77 aa27.48■■□□□ 1.99
LPCAT3-204ENST00000536797 BABAM1Q9NWV8 329 aa27.48■■□□□ 1.99
LPCAT3-204ENST00000536797 TSPYL4Q9UJ04 414 aa27.48■■□□□ 1.99
LPCAT3-204ENST00000536797 ATF5Q9Y2D1 282 aaPredicted RBP27.48■■□□□ 1.99
LPCAT3-204ENST00000536797 ADRA2BP18089 450 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms