RNA–Protein interactions for RNA: ENST00000536661.1

UBC-204, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-204ENST00000536661 C1orf141Q5JVX7 400 aa20.23■□□□□ 0.83
UBC-204ENST00000536661 LINC00116Q8NCU8 138 aa20.22■□□□□ 0.83
UBC-204ENST00000536661 ADAMTS7Q9UKP4 1686 aa20.22■□□□□ 0.83
UBC-204ENST00000536661 MSH5O43196 834 aa20.21■□□□□ 0.83
UBC-204ENST00000536661 HMGB2P26583 209 aaKnown RBP20.21■□□□□ 0.83
UBC-204ENST00000536661 ITPK1Q13572 414 aa20.21■□□□□ 0.83
UBC-204ENST00000536661 AMIGO3Q86WK7 504 aa20.21■□□□□ 0.83
UBC-204ENST00000536661 MAP3K5Q99683 1374 aa20.21■□□□□ 0.83
UBC-204ENST00000536661 YY1P25490 414 aa20.2■□□□□ 0.82
UBC-204ENST00000536661 CABP4P57796 275 aa20.2■□□□□ 0.82
UBC-204ENST00000536661 AK7Q96M32 723 aa20.2■□□□□ 0.82
UBC-204ENST00000536661 POLD1P28340 1107 aa20.19■□□□□ 0.82
UBC-204ENST00000536661 CICQ96RK0 1608 aaPredicted RBP20.19■□□□□ 0.82
UBC-204ENST00000536661 TJP1Q07157 1748 aa20.19■□□□□ 0.82
UBC-204ENST00000536661 MRC1P22897 1456 aa20.18■□□□□ 0.82
UBC-204ENST00000536661 DCAF8L1A6NGE4 600 aa20.18■□□□□ 0.82
UBC-204ENST00000536661 ATP6V1AP38606 617 aa20.18■□□□□ 0.82
UBC-204ENST00000536661 AKAP4Q5JQC9 854 aa20.17■□□□□ 0.82
UBC-204ENST00000536661 MSL1Q68DK7 614 aa20.17■□□□□ 0.82
UBC-204ENST00000536661 SMIM5Q71RC9 77 aa20.17■□□□□ 0.82
UBC-204ENST00000536661 FLAD1Q8NFF5 587 aa20.17■□□□□ 0.82
UBC-204ENST00000536661 SLC4A9Q96Q91 983 aa20.17■□□□□ 0.82
UBC-204ENST00000536661 MYH14Q7Z406 1995 aaKnown RBP20.17■□□□□ 0.82
UBC-204ENST00000536661 PHF14O94880 888 aa20.16■□□□□ 0.82
UBC-204ENST00000536661 U2SURPO15042 1029 aaKnown RBP20.15■□□□□ 0.82
UBC-204ENST00000536661 NFATC2IPQ8NCF5 419 aa20.15■□□□□ 0.82
UBC-204ENST00000536661 RBM42Q9BTD8 480 aaKnown RBP20.15■□□□□ 0.82
UBC-204ENST00000536661 C4AP0C0L4 1744 aa20.15■□□□□ 0.82
UBC-204ENST00000536661 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.14■□□□□ 0.81
UBC-204ENST00000536661 MTHFSDQ2M296 383 aaKnown RBP20.14■□□□□ 0.81
UBC-204ENST00000536661 KLHL34Q8N239 644 aa20.14■□□□□ 0.81
UBC-204ENST00000536661 GOLGB1Q14789 3259 aaKnown RBP20.14■□□□□ 0.81
UBC-204ENST00000536661 GNPATO15228 680 aa20.13■□□□□ 0.81
UBC-204ENST00000536661 SSFA2P28290 1259 aa20.13■□□□□ 0.81
UBC-204ENST00000536661 PPP2R1AP30153 589 aa20.13■□□□□ 0.81
UBC-204ENST00000536661 LGR6Q9HBX8 967 aa20.13■□□□□ 0.81
UBC-204ENST00000536661 SIPA1L3O60292 1781 aaPredicted RBP20.13■□□□□ 0.81
UBC-204ENST00000536661 CFAP53Q96M91 514 aa20.12■□□□□ 0.81
UBC-204ENST00000536661 UBR2Q8IWV8 1755 aa20.12■□□□□ 0.81
UBC-204ENST00000536661 RNMTO43148 476 aaKnown RBP20.11■□□□□ 0.81
UBC-204ENST00000536661 NLGN2Q8NFZ4 835 aa20.11■□□□□ 0.81
UBC-204ENST00000536661 SLC52A2Q9HAB3 445 aa20.11■□□□□ 0.81
UBC-204ENST00000536661 CHD4Q14839 1912 aa20.11■□□□□ 0.81
UBC-204ENST00000536661 PTCD1O75127 700 aaKnown RBP20.1■□□□□ 0.81
UBC-204ENST00000536661 CNTNAP4Q9C0A0 1308 aa20.09■□□□□ 0.81
UBC-204ENST00000536661 KCPQ6ZWJ8 1503 aa20.09■□□□□ 0.81
UBC-204ENST00000536661 RC3H1Q5TC82 1133 aaKnown RBP20.07■□□□□ 0.8
UBC-204ENST00000536661 RSPH6AQ9H0K4 717 aa20.07■□□□□ 0.8
UBC-204ENST00000536661 RTCBQ9Y3I0 505 aaKnown RBP20.07■□□□□ 0.8
UBC-204ENST00000536661 PRKAR2BP31323 418 aa20.05■□□□□ 0.8
UBC-204ENST00000536661 SLC39A6Q13433 755 aa20.05■□□□□ 0.8
UBC-204ENST00000536661 GAS2L2Q8NHY3 880 aa20.05■□□□□ 0.8
UBC-204ENST00000536661 RPS6KA4O75676 772 aa20.04■□□□□ 0.8
UBC-204ENST00000536661 GPR162Q16538 588 aa20.04■□□□□ 0.8
UBC-204ENST00000536661 NUDCQ9Y266 331 aa20.04■□□□□ 0.8
UBC-204ENST00000536661 CRKLP46109 303 aaKnown RBP20.03■□□□□ 0.8
UBC-204ENST00000536661 TRAPPC3LQ5T215 181 aa20.03■□□□□ 0.8
UBC-204ENST00000536661 PHACTR3Q96KR7 559 aa20.03■□□□□ 0.8
UBC-204ENST00000536661 KIF13BQ9NQT8 1826 aa20.03■□□□□ 0.8
UBC-204ENST00000536661 GNAT3A8MTJ3 354 aa20.02■□□□□ 0.8
UBC-204ENST00000536661 U2AF1L5P0DN76 240 aaPredicted RBP20.02■□□□□ 0.8
UBC-204ENST00000536661 ADRA2BP18089 450 aa20.02■□□□□ 0.8
UBC-204ENST00000536661 U2AF1Q01081 240 aaKnown RBP eCLIP20.02■□□□□ 0.8
UBC-204ENST00000536661 DLG5Q8TDM6 1919 aa20.02■□□□□ 0.79
UBC-204ENST00000536661 YBX3P16989 372 aaKnown RBP eCLIP20.01■□□□□ 0.791e-38■□□□□ 10
UBC-204ENST00000536661 DNAJC10Q8IXB1 793 aa20.01■□□□□ 0.79
UBC-204ENST00000536661 ZNF784Q8NCA9 323 aaPredicted RBP20.01■□□□□ 0.79
UBC-204ENST00000536661 IL17REQ8NFR9 667 aa20.01■□□□□ 0.79
UBC-204ENST00000536661 ARHGEF1Q92888 912 aaKnown RBP20.01■□□□□ 0.79
UBC-204ENST00000536661 KIAA1551Q9HCM1 1747 aa20.01■□□□□ 0.79
UBC-204ENST00000536661 PELP1Q8IZL8 1130 aaKnown RBP20■□□□□ 0.79
UBC-204ENST00000536661 CD2APQ9Y5K6 639 aa20■□□□□ 0.79
UBC-204ENST00000536661 CEMIPQ8WUJ3 1361 aa19.99■□□□□ 0.79
UBC-204ENST00000536661 MMP10P09238 476 aa19.98■□□□□ 0.79
UBC-204ENST00000536661 RFC4P35249 363 aa19.98■□□□□ 0.79
UBC-204ENST00000536661 TEFQ10587 303 aa19.98■□□□□ 0.79
UBC-204ENST00000536661 INTS5Q6P9B9 1019 aaKnown RBP19.98■□□□□ 0.79
UBC-204ENST00000536661 FCHSD2O94868 740 aa19.97■□□□□ 0.79
UBC-204ENST00000536661 GYS1P13807 737 aa19.97■□□□□ 0.79
UBC-204ENST00000536661 CCDC87Q9NVE4 849 aa19.97■□□□□ 0.79
UBC-204ENST00000536661 N4BP2Q86UW6 1770 aaPredicted RBP19.97■□□□□ 0.79
UBC-204ENST00000536661 CYP19A1P11511 503 aaPredicted RBP19.96■□□□□ 0.79
UBC-204ENST00000536661 TTC5Q8N0Z6 440 aa19.95■□□□□ 0.78
UBC-204ENST00000536661 VSIG10Q8N0Z9 540 aa19.95■□□□□ 0.78
UBC-204ENST00000536661 NLGN1Q8N2Q7 840 aa19.95■□□□□ 0.78
UBC-204ENST00000536661 SRP68Q9UHB9 627 aaKnown RBP19.95■□□□□ 0.78
UBC-204ENST00000536661 SOS1Q07889 1333 aaPredicted RBP19.95■□□□□ 0.78
UBC-204ENST00000536661 USP42Q9H9J4 1324 aaKnown RBP19.95■□□□□ 0.78
UBC-204ENST00000536661 DDX10Q13206 875 aaKnown RBP19.94■□□□□ 0.78
UBC-204ENST00000536661 HEG1Q9ULI3 1381 aa19.94■□□□□ 0.78
UBC-204ENST00000536661 C10orf71Q711Q0 1435 aa19.93■□□□□ 0.78
UBC-204ENST00000536661 ZNF790Q6PG37 636 aa19.93■□□□□ 0.78
UBC-204ENST00000536661 ZNF496Q96IT1 587 aaPredicted RBP19.93■□□□□ 0.78
UBC-204ENST00000536661 ZBTB1Q9Y2K1 713 aa19.93■□□□□ 0.78
UBC-204ENST00000536661 BRCA1P38398 1863 aaKnown RBP19.92■□□□□ 0.78
UBC-204ENST00000536661 COL15A1P39059 1388 aa19.92■□□□□ 0.78
UBC-204ENST00000536661 PXDNLA1KZ92 1463 aa19.92■□□□□ 0.78
UBC-204ENST00000536661 AFDNP55196 1824 aaKnown RBP19.91■□□□□ 0.78
UBC-204ENST00000536661 SCN7AQ01118 1682 aa19.91■□□□□ 0.78
UBC-204ENST00000536661 GRIN3BO60391 1043 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms