RNA–Protein interactions for RNA: ENST00000536301.1

CHD4-205, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 107 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-205ENST00000536301 NSD3Q9BZ95 1437 aa7.44□□□□□ -1.22
CHD4-205ENST00000536301 NEUROD1Q13562 356 aa7.44□□□□□ -1.22
CHD4-205ENST00000536301 SLC4A9Q96Q91 983 aa7.44□□□□□ -1.22
CHD4-205ENST00000536301 GGNBP2Q9H3C7 697 aa7.44□□□□□ -1.22
CHD4-205ENST00000536301 TERF2IPQ9NYB0 399 aa7.44□□□□□ -1.22
CHD4-205ENST00000536301 CCDC88AQ3V6T2 1871 aa7.44□□□□□ -1.22
CHD4-205ENST00000536301 RTL1A6NKG5 1358 aa7.44□□□□□ -1.22
CHD4-205ENST00000536301 TGFB2P61812 414 aa7.43□□□□□ -1.22
CHD4-205ENST00000536301 FSTL1Q12841 308 aa7.43□□□□□ -1.22
CHD4-205ENST00000536301 SMARCC1Q92922 1105 aaPredicted RBP7.43□□□□□ -1.22
CHD4-205ENST00000536301 RNF181Q9P0P0 153 aa7.43□□□□□ -1.22
CHD4-205ENST00000536301 TNRC6CQ9HCJ0 1690 aaKnown RBP7.43□□□□□ -1.22
CHD4-205ENST00000536301 CGNL1Q0VF96 1302 aa7.43□□□□□ -1.22
CHD4-205ENST00000536301 COL5A3P25940 1745 aaPredicted RBP7.42□□□□□ -1.22
CHD4-205ENST00000536301 ATP6V1AP38606 617 aa7.42□□□□□ -1.22
CHD4-205ENST00000536301 RASSF7Q02833 373 aa7.42□□□□□ -1.22
CHD4-205ENST00000536301 C16orf71Q8IYS4 520 aaPredicted RBP7.42□□□□□ -1.22
CHD4-205ENST00000536301 CARD11Q9BXL7 1154 aa7.42□□□□□ -1.22
CHD4-205ENST00000536301 ATG3Q9NT62 314 aa7.42□□□□□ -1.22
CHD4-205ENST00000536301 INSRP06213 1382 aa7.42□□□□□ -1.22
CHD4-205ENST00000536301 KDRP35968 1356 aa7.42□□□□□ -1.22
CHD4-205ENST00000536301 PLEKHG2Q9H7P9 1386 aa7.42□□□□□ -1.22
CHD4-205ENST00000536301 KIF20BQ96Q89 1820 aa7.41□□□□□ -1.22
CHD4-205ENST00000536301 FYB1O15117 783 aa7.41□□□□□ -1.22
CHD4-205ENST00000536301 GYS1P13807 737 aa7.41□□□□□ -1.22
CHD4-205ENST00000536301 CHRNA5P30532 468 aa7.41□□□□□ -1.22
CHD4-205ENST00000536301 NKX1-1Q15270 411 aaPredicted RBP7.41□□□□□ -1.22
CHD4-205ENST00000536301 ARHGEF1Q92888 912 aaKnown RBP7.41□□□□□ -1.22
CHD4-205ENST00000536301 DCAF5Q96JK2 942 aa7.41□□□□□ -1.22
CHD4-205ENST00000536301 TESK2Q96S53 571 aa7.41□□□□□ -1.22
CHD4-205ENST00000536301 SRP68Q9UHB9 627 aaKnown RBP7.41□□□□□ -1.22
CHD4-205ENST00000536301 EMILIN1Q9Y6C2 1016 aa7.41□□□□□ -1.22
CHD4-205ENST00000536301 NCAPD2Q15021 1401 aa7.41□□□□□ -1.22
CHD4-205ENST00000536301 SLC34A2O95436 690 aa7.4□□□□□ -1.22
CHD4-205ENST00000536301 TMF1P82094 1093 aa7.4□□□□□ -1.22
CHD4-205ENST00000536301 DDR1Q08345 913 aa7.4□□□□□ -1.22
CHD4-205ENST00000536301 CCDC87Q9NVE4 849 aa7.4□□□□□ -1.22
CHD4-205ENST00000536301 TMOD3Q9NYL9 352 aa7.4□□□□□ -1.22
CHD4-205ENST00000536301 SMG6Q86US8 1419 aaKnown RBP7.4□□□□□ -1.22
CHD4-205ENST00000536301 AFDNP55196 1824 aaKnown RBP7.39□□□□□ -1.23
CHD4-205ENST00000536301 FLT4P35916 1363 aa7.39□□□□□ -1.23
CHD4-205ENST00000536301 KDM2BQ8NHM5 1336 aa7.39□□□□□ -1.23
CHD4-205ENST00000536301 FKBP8Q14318 412 aa7.39□□□□□ -1.23
CHD4-205ENST00000536301 TRAPPC3LQ5T215 181 aa7.39□□□□□ -1.23
CHD4-205ENST00000536301 SMC1BQ8NDV3 1235 aa7.39□□□□□ -1.23
CHD4-205ENST00000536301 RTCBQ9Y3I0 505 aaKnown RBP7.39□□□□□ -1.23
CHD4-205ENST00000536301 TIAM2Q8IVF5 1701 aa7.38□□□□□ -1.23
CHD4-205ENST00000536301 ADAMTS7Q9UKP4 1686 aa7.38□□□□□ -1.23
CHD4-205ENST00000536301 POTECB2RU33 542 aa7.38□□□□□ -1.23
CHD4-205ENST00000536301 PHKG2P15735 406 aa7.38□□□□□ -1.23
CHD4-205ENST00000536301 DALRD3Q5D0E6 543 aaKnown RBP7.38□□□□□ -1.23
CHD4-205ENST00000536301 NLGN1Q8N2Q7 840 aa7.38□□□□□ -1.23
CHD4-205ENST00000536301 PUS7Q96PZ0 661 aaKnown RBP7.38□□□□□ -1.23
CHD4-205ENST00000536301 EYA1Q99502 592 aa7.38□□□□□ -1.23
CHD4-205ENST00000536301 RBM42Q9BTD8 480 aaKnown RBP7.38□□□□□ -1.23
CHD4-205ENST00000536301 PIM2Q9P1W9 311 aa7.38□□□□□ -1.23
CHD4-205ENST00000536301 PARP3Q9Y6F1 533 aa7.38□□□□□ -1.23
CHD4-205ENST00000536301 KDM6AO15550 1401 aaPredicted RBP7.37□□□□□ -1.23
CHD4-205ENST00000536301 ST20-MTHFSA0A0A6YYL1 179 aa7.37□□□□□ -1.23
CHD4-205ENST00000536301 FOXN1O15353 648 aa7.37□□□□□ -1.23
CHD4-205ENST00000536301 RPS6KA4O75676 772 aa7.37□□□□□ -1.23
CHD4-205ENST00000536301 MKRN1Q9UHC7 482 aaKnown RBP7.37□□□□□ -1.23
CHD4-205ENST00000536301 TJP1Q07157 1748 aa7.37□□□□□ -1.23
CHD4-205ENST00000536301 ANKRD26Q9UPS8 1709 aa7.37□□□□□ -1.23
CHD4-205ENST00000536301 ZNF831Q5JPB2 1677 aa7.37□□□□□ -1.23
CHD4-205ENST00000536301 CNTNAP4Q9C0A0 1308 aa7.36□□□□□ -1.23
CHD4-205ENST00000536301 POTEIP0CG38 1075 aa7.36□□□□□ -1.23
CHD4-205ENST00000536301 POTEJP0CG39 1038 aa7.36□□□□□ -1.23
CHD4-205ENST00000536301 RFC4P35249 363 aa7.36□□□□□ -1.23
CHD4-205ENST00000536301 RC3H1Q5TC82 1133 aaKnown RBP7.36□□□□□ -1.23
CHD4-205ENST00000536301 SPG7Q9UQ90 795 aa7.36□□□□□ -1.23
CHD4-205ENST00000536301 DLEC1Q9Y238 1755 aa7.36□□□□□ -1.23
CHD4-205ENST00000536301 TONSLQ96HA7 1378 aa7.35□□□□□ -1.23
CHD4-205ENST00000536301 USP42Q9H9J4 1324 aaKnown RBP7.35□□□□□ -1.23
CHD4-205ENST00000536301 GLTPD2A6NH11 291 aa7.35□□□□□ -1.23
CHD4-205ENST00000536301 NFKBIEO00221 500 aa7.35□□□□□ -1.23
CHD4-205ENST00000536301 POLRMTO00411 1230 aaKnown RBP7.35□□□□□ -1.23
CHD4-205ENST00000536301 PPM1GO15355 546 aaPredicted RBP7.35□□□□□ -1.23
CHD4-205ENST00000536301 VEGFAP15692 232 aaPredicted RBP7.35□□□□□ -1.23
CHD4-205ENST00000536301 ADRA2BP18089 450 aa7.35□□□□□ -1.23
CHD4-205ENST00000536301 HMGB2P26583 209 aaKnown RBP7.35□□□□□ -1.23
CHD4-205ENST00000536301 IFNL2Q8IZJ0 200 aa7.35□□□□□ -1.23
CHD4-205ENST00000536301 CARD14Q9BXL6 1004 aa7.35□□□□□ -1.23
CHD4-205ENST00000536301 DICER1Q9UPY3 1922 aaKnown RBP7.35□□□□□ -1.23
CHD4-205ENST00000536301 CARMIL3Q8ND23 1372 aa7.34□□□□□ -1.23
CHD4-205ENST00000536301 TM4SF1P30408 202 aa7.34□□□□□ -1.23
CHD4-205ENST00000536301 CRKLP46109 303 aaKnown RBP7.34□□□□□ -1.23
CHD4-205ENST00000536301 NRXN2Q9P2S2 1712 aa7.34□□□□□ -1.23
CHD4-205ENST00000536301 ANKRD31Q8N7Z5 1873 aa7.34□□□□□ -1.23
CHD4-205ENST00000536301 VIRMAQ69YN4 1812 aaKnown RBP7.34□□□□□ -1.24
CHD4-205ENST00000536301 KIF24Q5T7B8 1368 aa7.33□□□□□ -1.24
CHD4-205ENST00000536301 PTCD1O75127 700 aaKnown RBP7.33□□□□□ -1.24
CHD4-205ENST00000536301 LMNB1P20700 586 aa7.33□□□□□ -1.24
CHD4-205ENST00000536301 EIF4A2Q14240 407 aaKnown RBP7.33□□□□□ -1.24
CHD4-205ENST00000536301 FAM161AQ3B820 660 aa7.33□□□□□ -1.24
CHD4-205ENST00000536301 INTS5Q6P9B9 1019 aaKnown RBP7.33□□□□□ -1.24
CHD4-205ENST00000536301 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.33□□□□□ -1.245e-11■■■■□ 19.6
CHD4-205ENST00000536301 COL11A2P13942 1736 aaPredicted RBP7.32□□□□□ -1.24
CHD4-205ENST00000536301 CACNA1SQ13698 1873 aa7.32□□□□□ -1.24
CHD4-205ENST00000536301 FER1L6Q2WGJ9 1857 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms