RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 SSFA2P28290 1259 aa19.7■□□□□ 0.74
CHMP1A-202ENST00000535997 ATP8B2P98198 1209 aa19.7■□□□□ 0.74
CHMP1A-202ENST00000535997 ABTB2Q8N961 1025 aa19.69■□□□□ 0.74
CHMP1A-202ENST00000535997 LRRCC1Q9C099 1032 aa19.69■□□□□ 0.74
CHMP1A-202ENST00000535997 PANK2Q9BZ23 570 aa19.69■□□□□ 0.74
CHMP1A-202ENST00000535997 MAP3K5Q99683 1374 aa19.68■□□□□ 0.74
CHMP1A-202ENST00000535997 LRRC37A3O60309 1634 aa19.68■□□□□ 0.74
CHMP1A-202ENST00000535997 KCNA6P17658 529 aa19.68■□□□□ 0.74
CHMP1A-202ENST00000535997 EXOC6BQ9Y2D4 811 aa19.68■□□□□ 0.74
CHMP1A-202ENST00000535997 SALL3Q9BXA9 1300 aa19.67■□□□□ 0.74
CHMP1A-202ENST00000535997 XRN1Q8IZH2 1706 aaKnown RBP19.67■□□□□ 0.74
CHMP1A-202ENST00000535997 BAG4O95429 457 aaKnown RBP19.67■□□□□ 0.74
CHMP1A-202ENST00000535997 NWD1Q149M9 1564 aa19.66■□□□□ 0.74
CHMP1A-202ENST00000535997 NUTM2GQ5VZR2 741 aa19.65■□□□□ 0.74
CHMP1A-202ENST00000535997 PNMA6EA0A0J9YXQ4 647 aa19.65■□□□□ 0.74
CHMP1A-202ENST00000535997 CYP2E1P05181 493 aaPredicted RBP19.65■□□□□ 0.74
CHMP1A-202ENST00000535997 SRCIN1Q9C0H9 1055 aa19.65■□□□□ 0.74
CHMP1A-202ENST00000535997 USP54Q70EL1 1684 aa19.65■□□□□ 0.74
CHMP1A-202ENST00000535997 IBTKQ9P2D0 1353 aaPredicted RBP19.64■□□□□ 0.74
CHMP1A-202ENST00000535997 MX1P20591 662 aa19.64■□□□□ 0.74
CHMP1A-202ENST00000535997 KLHL40Q2TBA0 621 aa19.64■□□□□ 0.74
CHMP1A-202ENST00000535997 PLPPR3Q6T4P5 718 aa19.64■□□□□ 0.74
CHMP1A-202ENST00000535997 USP44Q9H0E7 712 aa19.64■□□□□ 0.73
CHMP1A-202ENST00000535997 ANO8Q9HCE9 1232 aaPredicted RBP19.64■□□□□ 0.73
CHMP1A-202ENST00000535997 STAP2Q9UGK3 403 aa19.64■□□□□ 0.73
CHMP1A-202ENST00000535997 NECTIN2Q92692 538 aa19.63■□□□□ 0.73
CHMP1A-202ENST00000535997 CHMP4AQ9BY43 222 aa19.63■□□□□ 0.73
CHMP1A-202ENST00000535997 RRAGDQ9NQL2 400 aaPredicted RBP19.63■□□□□ 0.73
CHMP1A-202ENST00000535997 PXDNLA1KZ92 1463 aa19.63■□□□□ 0.73
CHMP1A-202ENST00000535997 MARF1Q9Y4F3 1742 aaKnown RBP19.62■□□□□ 0.73
CHMP1A-202ENST00000535997 GAS2L3Q86XJ1 694 aa19.62■□□□□ 0.73
CHMP1A-202ENST00000535997 LTV1Q96GA3 475 aaPredicted RBP19.62■□□□□ 0.73
CHMP1A-202ENST00000535997 FAM208AQ9UK61 1670 aaKnown RBP19.62■□□□□ 0.73
CHMP1A-202ENST00000535997 ESYT1Q9BSJ8 1104 aa19.62■□□□□ 0.73
CHMP1A-202ENST00000535997 LRRFIP2Q9Y608 721 aaKnown RBP19.62■□□□□ 0.73
CHMP1A-202ENST00000535997 DDX49Q9Y6V7 483 aaKnown RBP19.62■□□□□ 0.73
CHMP1A-202ENST00000535997 UBTFL1P0CB47 393 aaPredicted RBP19.61■□□□□ 0.73
CHMP1A-202ENST00000535997 MCM2P49736 904 aa19.61■□□□□ 0.73
CHMP1A-202ENST00000535997 HDGFL1Q5TGJ6 251 aa19.61■□□□□ 0.73
CHMP1A-202ENST00000535997 IP6K1Q92551 441 aa19.61■□□□□ 0.73
CHMP1A-202ENST00000535997 AK9Q5TCS8 1911 aa19.6■□□□□ 0.73
CHMP1A-202ENST00000535997 SSH3Q8TE77 659 aa19.6■□□□□ 0.73
CHMP1A-202ENST00000535997 PHF8Q9UPP1 1060 aa19.6■□□□□ 0.73
CHMP1A-202ENST00000535997 CEMIPQ8WUJ3 1361 aa19.6■□□□□ 0.73
CHMP1A-202ENST00000535997 FER1L4A9Z1Z3 1794 aa19.59■□□□□ 0.73
CHMP1A-202ENST00000535997 ANAPC15P60006 121 aa19.59■□□□□ 0.73
CHMP1A-202ENST00000535997 AOX1Q06278 1338 aa19.59■□□□□ 0.73
CHMP1A-202ENST00000535997 MCCP23508 829 aa19.59■□□□□ 0.73
CHMP1A-202ENST00000535997 CHMLP26374 656 aa19.59■□□□□ 0.73
CHMP1A-202ENST00000535997 RAB11FIP3O75154 756 aa19.58■□□□□ 0.73
CHMP1A-202ENST00000535997 HOXB7P09629 217 aa19.58■□□□□ 0.73
CHMP1A-202ENST00000535997 NEK4P51957 841 aa19.58■□□□□ 0.73
CHMP1A-202ENST00000535997 TSHZ3Q63HK5 1081 aa19.58■□□□□ 0.73
CHMP1A-202ENST00000535997 N4BP2Q86UW6 1770 aaPredicted RBP19.58■□□□□ 0.72
CHMP1A-202ENST00000535997 EPB41L2O43491 1005 aaKnown RBP19.58■□□□□ 0.72
CHMP1A-202ENST00000535997 MCTP1Q6DN14 999 aa19.58■□□□□ 0.72
CHMP1A-202ENST00000535997 TRIM6-TRIM34B2RNG4 842 aa19.57■□□□□ 0.72
CHMP1A-202ENST00000535997 C14orf37Q86TY3 774 aa19.57■□□□□ 0.72
CHMP1A-202ENST00000535997 ZGPATQ8N5A5 531 aaKnown RBP19.57■□□□□ 0.72
CHMP1A-202ENST00000535997 PHAXQ9H814 394 aaKnown RBP19.57■□□□□ 0.72
CHMP1A-202ENST00000535997 TUBGCP6Q96RT7 1819 aa19.57■□□□□ 0.72
CHMP1A-202ENST00000535997 RILPL2Q969X0 211 aa19.56■□□□□ 0.72
CHMP1A-202ENST00000535997 IL17RAQ96F46 866 aa19.56■□□□□ 0.72
CHMP1A-202ENST00000535997 LMBRD1Q9NUN5 540 aa19.56■□□□□ 0.72
CHMP1A-202ENST00000535997 PKP1Q13835 747 aa19.56■□□□□ 0.72
CHMP1A-202ENST00000535997 USHBP1Q8N6Y0 703 aa19.56■□□□□ 0.72
CHMP1A-202ENST00000535997 EIF4A1P60842 406 aaKnown RBP19.55■□□□□ 0.72
CHMP1A-202ENST00000535997 CLCN1P35523 988 aa19.55■□□□□ 0.72
CHMP1A-202ENST00000535997 POLA2Q14181 598 aa19.55■□□□□ 0.72
CHMP1A-202ENST00000535997 NBPF6Q5VWK0 638 aa19.55■□□□□ 0.72
CHMP1A-202ENST00000535997 KCNH5Q8NCM2 988 aa19.55■□□□□ 0.72
CHMP1A-202ENST00000535997 NBPF4Q96M43 638 aa19.55■□□□□ 0.72
CHMP1A-202ENST00000535997 TMX3Q96JJ7 454 aa19.54■□□□□ 0.72
CHMP1A-202ENST00000535997 ZDHHC9Q9Y397 364 aa19.54■□□□□ 0.72
CHMP1A-202ENST00000535997 PPP1R42Q7Z4L9 355 aa19.54■□□□□ 0.72
CHMP1A-202ENST00000535997 ANO2Q9NQ90 1003 aa19.54■□□□□ 0.72
CHMP1A-202ENST00000535997 ZNF445P59923 1031 aa19.53■□□□□ 0.72
CHMP1A-202ENST00000535997 SURF6O75683 361 aaKnown RBP19.53■□□□□ 0.72
CHMP1A-202ENST00000535997 EIF2S2P20042 333 aaKnown RBP19.53■□□□□ 0.72
CHMP1A-202ENST00000535997 CUL4AQ13619 759 aa19.53■□□□□ 0.72
CHMP1A-202ENST00000535997 LGR6Q9HBX8 967 aa19.53■□□□□ 0.72
CHMP1A-202ENST00000535997 LTN1O94822 1766 aa19.52■□□□□ 0.72
CHMP1A-202ENST00000535997 PSME1Q06323 249 aa19.52■□□□□ 0.72
CHMP1A-202ENST00000535997 INTS4Q96HW7 963 aaKnown RBP19.52■□□□□ 0.72
CHMP1A-202ENST00000535997 IL1RAPL2Q9NP60 686 aa19.51■□□□□ 0.71
CHMP1A-202ENST00000535997 BEND3Q5T5X7 828 aa19.51■□□□□ 0.71
CHMP1A-202ENST00000535997 ANKLE2Q86XL3 938 aa19.51■□□□□ 0.71
CHMP1A-202ENST00000535997 UNC5CLQ8IV45 518 aa19.51■□□□□ 0.71
CHMP1A-202ENST00000535997 DNAAF4Q8WXU2 420 aa19.51■□□□□ 0.71
CHMP1A-202ENST00000535997 TRIM44Q96DX7 344 aaPredicted RBP19.51■□□□□ 0.71
CHMP1A-202ENST00000535997 KIF1BPQ96EK5 621 aa19.51■□□□□ 0.71
CHMP1A-202ENST00000535997 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.51■□□□□ 0.71
CHMP1A-202ENST00000535997 AKAP4Q5JQC9 854 aa19.5■□□□□ 0.71
CHMP1A-202ENST00000535997 RHPN1Q8TCX5 695 aa19.5■□□□□ 0.71
CHMP1A-202ENST00000535997 PALD1Q9ULE6 856 aa19.5■□□□□ 0.71
CHMP1A-202ENST00000535997 PI4KAP2A4QPH2 592 aa19.5■□□□□ 0.71
CHMP1A-202ENST00000535997 SRGAP3O43295 1099 aa19.5■□□□□ 0.71
CHMP1A-202ENST00000535997 HSP90AB4PQ58FF6 505 aa19.5■□□□□ 0.71
CHMP1A-202ENST00000535997 PI4KAP1Q8N8J0 262 aa19.5■□□□□ 0.71
CHMP1A-202ENST00000535997 NFAT5O94916 1531 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms