RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 MPRIPQ6WCQ1 1025 aa12.02□□□□□ -0.49
CHD4-204ENST00000535810 AEBP1Q8IUX7 1158 aa12.02□□□□□ -0.49
CHD4-204ENST00000535810 FHDC1Q9C0D6 1143 aaPredicted RBP12.02□□□□□ -0.49
CHD4-204ENST00000535810 GOLGB1Q14789 3259 aaKnown RBP12.02□□□□□ -0.49
CHD4-204ENST00000535810 KDRP35968 1356 aa12.02□□□□□ -0.49
CHD4-204ENST00000535810 MTHFSP49914 203 aa12.01□□□□□ -0.49
CHD4-204ENST00000535810 AKT1S1Q96B36 256 aa12.01□□□□□ -0.49
CHD4-204ENST00000535810 CCNL1Q9UK58 526 aaPredicted RBP12.01□□□□□ -0.49
CHD4-204ENST00000535810 ITGB4P16144 1822 aa12.01□□□□□ -0.49
CHD4-204ENST00000535810 PALLDQ8WX93 1383 aa12.01□□□□□ -0.49
CHD4-204ENST00000535810 IFNL2Q8IZJ0 200 aa12□□□□□ -0.49
CHD4-204ENST00000535810 SULT6B1Q6IMI4 303 aa11.99□□□□□ -0.49
CHD4-204ENST00000535810 PIGBQ92521 554 aa11.99□□□□□ -0.49
CHD4-204ENST00000535810 MTFR1LQ9H019 292 aa11.99□□□□□ -0.49
CHD4-204ENST00000535810 TUBGCP6Q96RT7 1819 aa11.98□□□□□ -0.49
CHD4-204ENST00000535810 QSER1Q2KHR3 1735 aa11.98□□□□□ -0.49
CHD4-204ENST00000535810 COL3A1P02461 1466 aaPredicted RBP11.98□□□□□ -0.49
CHD4-204ENST00000535810 PNPLA7Q6ZV29 1317 aa11.98□□□□□ -0.49
CHD4-204ENST00000535810 CNGB1Q14028 1251 aaPredicted RBP11.98□□□□□ -0.49
CHD4-204ENST00000535810 PLEKHO1Q53GL0 409 aaPredicted RBP11.98□□□□□ -0.49
CHD4-204ENST00000535810 TMOD3Q9NYL9 352 aa11.98□□□□□ -0.49
CHD4-204ENST00000535810 C5P01031 1676 aa11.97□□□□□ -0.49
CHD4-204ENST00000535810 KDM6AO15550 1401 aaPredicted RBP11.97□□□□□ -0.49
CHD4-204ENST00000535810 AMOTQ4VCS5 1084 aa11.97□□□□□ -0.49
CHD4-204ENST00000535810 ZNF530Q6P9A1 599 aaPredicted RBP11.97□□□□□ -0.49
CHD4-204ENST00000535810 SMARCC1Q92922 1105 aaPredicted RBP11.97□□□□□ -0.49
CHD4-204ENST00000535810 SGIP1Q9BQI5 828 aa11.97□□□□□ -0.49
CHD4-204ENST00000535810 TFCP2L1Q9NZI6 479 aa11.97□□□□□ -0.49
CHD4-204ENST00000535810 DIAPH1O60610 1272 aaKnown RBP11.96□□□□□ -0.49
CHD4-204ENST00000535810 HSP90AB1P08238 724 aaKnown RBP11.96□□□□□ -0.49
CHD4-204ENST00000535810 IFNLR1Q8IU57 520 aaPredicted RBP11.96□□□□□ -0.49
CHD4-204ENST00000535810 DCAF5Q96JK2 942 aa11.96□□□□□ -0.49
CHD4-204ENST00000535810 MAP3K5Q99683 1374 aa11.95□□□□□ -0.5
CHD4-204ENST00000535810 ASAP1Q9ULH1 1129 aa11.95□□□□□ -0.5
CHD4-204ENST00000535810 TAF1LQ8IZX4 1826 aa11.95□□□□□ -0.5
CHD4-204ENST00000535810 LOC102724428A0A0B4J2F2 783 aa11.94□□□□□ -0.5
CHD4-204ENST00000535810 ERVV-2B6SEH9 535 aa11.94□□□□□ -0.5
CHD4-204ENST00000535810 HMOX1P09601 288 aa11.94□□□□□ -0.5
CHD4-204ENST00000535810 SIK1P57059 783 aa11.94□□□□□ -0.5
CHD4-204ENST00000535810 GPR162Q16538 588 aa11.94□□□□□ -0.5
CHD4-204ENST00000535810 ARXQ96QS3 562 aa11.94□□□□□ -0.5
CHD4-204ENST00000535810 C4BP0C0L5 1744 aa11.94□□□□□ -0.5
CHD4-204ENST00000535810 C1orf141Q5JVX7 400 aa11.93□□□□□ -0.5
CHD4-204ENST00000535810 SLC16A10Q8TF71 515 aa11.93□□□□□ -0.5
CHD4-204ENST00000535810 ATG3Q9NT62 314 aa11.93□□□□□ -0.5
CHD4-204ENST00000535810 COL24A1Q17RW2 1714 aa11.92□□□□□ -0.5
CHD4-204ENST00000535810 CHD4Q14839 1912 aa11.92□□□□□ -0.5
CHD4-204ENST00000535810 HMGB2P26583 209 aaKnown RBP11.92□□□□□ -0.5
CHD4-204ENST00000535810 PPP2R1AP30153 589 aa11.91□□□□□ -0.5
CHD4-204ENST00000535810 CABP4P57796 275 aa11.91□□□□□ -0.5
CHD4-204ENST00000535810 ITPK1Q13572 414 aa11.91□□□□□ -0.5
CHD4-204ENST00000535810 AKAP4Q5JQC9 854 aa11.91□□□□□ -0.5
CHD4-204ENST00000535810 AMIGO3Q86WK7 504 aa11.91□□□□□ -0.5
CHD4-204ENST00000535810 COL23A1Q86Y22 540 aaPredicted RBP11.91□□□□□ -0.5
CHD4-204ENST00000535810 LINC00116Q8NCU8 138 aa11.91□□□□□ -0.5
CHD4-204ENST00000535810 MRC1P22897 1456 aa11.9□□□□□ -0.5
CHD4-204ENST00000535810 SCN11AQ9UI33 1791 aa11.9□□□□□ -0.5
CHD4-204ENST00000535810 U2SURPO15042 1029 aaKnown RBP11.9□□□□□ -0.5
CHD4-204ENST00000535810 ATP6V1AP38606 617 aa11.9□□□□□ -0.5
CHD4-204ENST00000535810 AK7Q96M32 723 aa11.9□□□□□ -0.5
CHD4-204ENST00000535810 UBR3Q6ZT12 1888 aa11.89□□□□□ -0.51
CHD4-204ENST00000535810 MTHFSDQ2M296 383 aaKnown RBP11.89□□□□□ -0.51
CHD4-204ENST00000535810 NFATC2IPQ8NCF5 419 aa11.89□□□□□ -0.51
CHD4-204ENST00000535810 FLAD1Q8NFF5 587 aa11.89□□□□□ -0.51
CHD4-204ENST00000535810 CFAP53Q96M91 514 aa11.89□□□□□ -0.51
CHD4-204ENST00000535810 SLC4A9Q96Q91 983 aa11.89□□□□□ -0.51
CHD4-204ENST00000535810 ZNF831Q5JPB2 1677 aa11.89□□□□□ -0.51
CHD4-204ENST00000535810 ADAMTS7Q9UKP4 1686 aa11.88□□□□□ -0.51
CHD4-204ENST00000535810 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.88□□□□□ -0.51
CHD4-204ENST00000535810 POLD1P28340 1107 aa11.88□□□□□ -0.51
CHD4-204ENST00000535810 COL5A3P25940 1745 aaPredicted RBP11.87□□□□□ -0.51
CHD4-204ENST00000535810 GNPATO15228 680 aa11.87□□□□□ -0.51
CHD4-204ENST00000535810 PHF14O94880 888 aa11.87□□□□□ -0.51
CHD4-204ENST00000535810 HSPA6P17066 643 aa11.87□□□□□ -0.51
CHD4-204ENST00000535810 SSFA2P28290 1259 aa11.87□□□□□ -0.51
CHD4-204ENST00000535810 MSL1Q68DK7 614 aa11.87□□□□□ -0.51
CHD4-204ENST00000535810 SMIM5Q71RC9 77 aa11.87□□□□□ -0.51
CHD4-204ENST00000535810 RBM42Q9BTD8 480 aaKnown RBP11.87□□□□□ -0.51
CHD4-204ENST00000535810 SLC52A2Q9HAB3 445 aa11.87□□□□□ -0.51
CHD4-204ENST00000535810 LGR6Q9HBX8 967 aa11.87□□□□□ -0.51
CHD4-204ENST00000535810 RNMTO43148 476 aaKnown RBP11.86□□□□□ -0.51
CHD4-204ENST00000535810 ZEB1P37275 1124 aaPredicted RBP11.86□□□□□ -0.51
CHD4-204ENST00000535810 RSPH6AQ9H0K4 717 aa11.86□□□□□ -0.51
CHD4-204ENST00000535810 CICQ96RK0 1608 aaPredicted RBP11.86□□□□□ -0.51
CHD4-204ENST00000535810 CNTNAP4Q9C0A0 1308 aa11.86□□□□□ -0.51
CHD4-204ENST00000535810 GRIN3BO60391 1043 aa11.85□□□□□ -0.51
CHD4-204ENST00000535810 PTCD1O75127 700 aaKnown RBP11.85□□□□□ -0.51
CHD4-204ENST00000535810 PRKAR2BP31323 418 aa11.85□□□□□ -0.51
CHD4-204ENST00000535810 GAS2L2Q8NHY3 880 aa11.85□□□□□ -0.51
CHD4-204ENST00000535810 NUDCQ9Y266 331 aa11.85□□□□□ -0.51
CHD4-204ENST00000535810 VIRMAQ69YN4 1812 aaKnown RBP11.85□□□□□ -0.51
CHD4-204ENST00000535810 TJP1Q07157 1748 aa11.84□□□□□ -0.51
CHD4-204ENST00000535810 U2AF1L5P0DN76 240 aaPredicted RBP11.84□□□□□ -0.51
CHD4-204ENST00000535810 U2AF1Q01081 240 aaKnown RBP eCLIP11.84□□□□□ -0.51
CHD4-204ENST00000535810 KLHL34Q8N239 644 aa11.84□□□□□ -0.51
CHD4-204ENST00000535810 PLCD3Q8N3E9 789 aa11.84□□□□□ -0.51
CHD4-204ENST00000535810 PHACTR3Q96KR7 559 aa11.84□□□□□ -0.51
CHD4-204ENST00000535810 KCPQ6ZWJ8 1503 aa11.84□□□□□ -0.51
CHD4-204ENST00000535810 GNAT3A8MTJ3 354 aa11.83□□□□□ -0.52
CHD4-204ENST00000535810 RC3H1Q5TC82 1133 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms