RNA–Protein interactions for RNA: ENST00000535765.5

VPS37B-203, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-203ENST00000535765 RSPH6AQ9H0K4 717 aa31.36■■■□□ 2.61
VPS37B-203ENST00000535765 SLC16A10Q8TF71 515 aa31.35■■■□□ 2.61
VPS37B-203ENST00000535765 ATG3Q9NT62 314 aa31.35■■■□□ 2.61
VPS37B-203ENST00000535765 GAS2L2Q8NHY3 880 aa31.34■■■□□ 2.61
VPS37B-203ENST00000535765 ZNF831Q5JPB2 1677 aa31.34■■■□□ 2.61
VPS37B-203ENST00000535765 U2AF1L5P0DN76 240 aaPredicted RBP31.33■■■□□ 2.61
VPS37B-203ENST00000535765 U2AF1Q01081 240 aaKnown RBP eCLIP31.33■■■□□ 2.61
VPS37B-203ENST00000535765 MSH5O43196 834 aa31.32■■■□□ 2.6
VPS37B-203ENST00000535765 TUBGCP6Q96RT7 1819 aa31.32■■■□□ 2.6
VPS37B-203ENST00000535765 MYBBP1AQ9BQG0 1328 aaKnown RBP31.3■■■□□ 2.6
VPS37B-203ENST00000535765 ZNF316A6NFI3 1004 aaPredicted RBP31.3■■■□□ 2.6
VPS37B-203ENST00000535765 PRKAR2BP31323 418 aa31.3■■■□□ 2.6
VPS37B-203ENST00000535765 ATP6V1AP38606 617 aa31.3■■■□□ 2.6
VPS37B-203ENST00000535765 AK7Q96M32 723 aa31.3■■■□□ 2.6
VPS37B-203ENST00000535765 RNMTO43148 476 aaKnown RBP31.29■■■□□ 2.6
VPS37B-203ENST00000535765 NFATC2IPQ8NCF5 419 aa31.29■■■□□ 2.6
VPS37B-203ENST00000535765 SGIP1Q9BQI5 828 aa31.29■■■□□ 2.6
VPS37B-203ENST00000535765 MRC1P22897 1456 aa31.28■■■□□ 2.6
VPS37B-203ENST00000535765 COL23A1Q86Y22 540 aaPredicted RBP31.28■■■□□ 2.6
VPS37B-203ENST00000535765 LGR6Q9HBX8 967 aa31.28■■■□□ 2.6
VPS37B-203ENST00000535765 RBM42Q9BTD8 480 aaKnown RBP31.27■■■□□ 2.6
VPS37B-203ENST00000535765 SLC52A2Q9HAB3 445 aa31.27■■■□□ 2.6
VPS37B-203ENST00000535765 GNAT3A8MTJ3 354 aa31.26■■■□□ 2.59
VPS37B-203ENST00000535765 ITPK1Q13572 414 aa31.26■■■□□ 2.59
VPS37B-203ENST00000535765 LINC00116Q8NCU8 138 aa31.26■■■□□ 2.59
VPS37B-203ENST00000535765 FLAD1Q8NFF5 587 aa31.26■■■□□ 2.59
VPS37B-203ENST00000535765 PHACTR3Q96KR7 559 aa31.26■■■□□ 2.59
VPS37B-203ENST00000535765 C4BP0C0L5 1744 aa31.26■■■□□ 2.59
VPS37B-203ENST00000535765 POLD1P28340 1107 aa31.25■■■□□ 2.59
VPS37B-203ENST00000535765 ARXQ96QS3 562 aa31.25■■■□□ 2.59
VPS37B-203ENST00000535765 MAP3K5Q99683 1374 aa31.25■■■□□ 2.59
VPS37B-203ENST00000535765 PRKRIP1Q9H875 184 aaPredicted RBP31.24■■■□□ 2.59
VPS37B-203ENST00000535765 UBR3Q6ZT12 1888 aa31.21■■■□□ 2.59
VPS37B-203ENST00000535765 FHDC1Q9C0D6 1143 aaPredicted RBP31.21■■■□□ 2.59
VPS37B-203ENST00000535765 PNNQ9H307 717 aaKnown RBP31.21■■■□□ 2.59
VPS37B-203ENST00000535765 SIPA1L3O60292 1781 aaPredicted RBP31.2■■■□□ 2.59
VPS37B-203ENST00000535765 PTCD1O75127 700 aaKnown RBP31.2■■■□□ 2.59
VPS37B-203ENST00000535765 PHF14O94880 888 aa31.2■■■□□ 2.59
VPS37B-203ENST00000535765 SLC4A9Q96Q91 983 aa31.2■■■□□ 2.59
VPS37B-203ENST00000535765 COL24A1Q17RW2 1714 aa31.2■■■□□ 2.58
VPS37B-203ENST00000535765 CICQ96RK0 1608 aaPredicted RBP31.2■■■□□ 2.58
VPS37B-203ENST00000535765 COL5A3P25940 1745 aaPredicted RBP31.19■■■□□ 2.58
VPS37B-203ENST00000535765 GNPATO15228 680 aa31.19■■■□□ 2.58
VPS37B-203ENST00000535765 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.18■■■□□ 2.58
VPS37B-203ENST00000535765 IL17REQ8NFR9 667 aa31.18■■■□□ 2.58
VPS37B-203ENST00000535765 CEMIPQ8WUJ3 1361 aa31.17■■■□□ 2.58
VPS37B-203ENST00000535765 NEFMP07197 916 aa31.17■■■□□ 2.58
VPS37B-203ENST00000535765 SSFA2P28290 1259 aa31.17■■■□□ 2.58
VPS37B-203ENST00000535765 AMIGO3Q86WK7 504 aa31.17■■■□□ 2.58
VPS37B-203ENST00000535765 SYT17Q9BSW7 474 aa31.17■■■□□ 2.58
VPS37B-203ENST00000535765 DCAF8L1A6NGE4 600 aa31.16■■■□□ 2.58
VPS37B-203ENST00000535765 HTATSF1O43719 755 aaKnown RBP31.16■■■□□ 2.58
VPS37B-203ENST00000535765 MSL1Q68DK7 614 aa31.16■■■□□ 2.58
VPS37B-203ENST00000535765 SMIM5Q71RC9 77 aa31.16■■■□□ 2.58
VPS37B-203ENST00000535765 PLEKHF1Q96S99 279 aa31.16■■■□□ 2.58
VPS37B-203ENST00000535765 DLG5Q8TDM6 1919 aa31.16■■■□□ 2.58
VPS37B-203ENST00000535765 UBR2Q8IWV8 1755 aa31.14■■■□□ 2.58
VPS37B-203ENST00000535765 TEFQ10587 303 aa31.13■■■□□ 2.57
VPS37B-203ENST00000535765 RC3H1Q5TC82 1133 aaKnown RBP31.13■■■□□ 2.57
VPS37B-203ENST00000535765 KLHL34Q8N239 644 aa31.13■■■□□ 2.57
VPS37B-203ENST00000535765 MYH14Q7Z406 1995 aaKnown RBP31.11■■■□□ 2.57
VPS37B-203ENST00000535765 RTCBQ9Y3I0 505 aaKnown RBP31.11■■■□□ 2.57
VPS37B-203ENST00000535765 TJP1Q07157 1748 aa31.1■■■□□ 2.57
VPS37B-203ENST00000535765 RTF1Q92541 710 aaKnown RBP31.1■■■□□ 2.57
VPS37B-203ENST00000535765 CNTNAP4Q9C0A0 1308 aa31.09■■■□□ 2.57
VPS37B-203ENST00000535765 SLC39A6Q13433 755 aa31.09■■■□□ 2.57
VPS37B-203ENST00000535765 KCPQ6ZWJ8 1503 aa31.08■■■□□ 2.57
VPS37B-203ENST00000535765 TRAPPC3LQ5T215 181 aa31.07■■■□□ 2.56
VPS37B-203ENST00000535765 VSIG10Q8N0Z9 540 aa31.07■■■□□ 2.56
VPS37B-203ENST00000535765 MAPK8IP3Q9UPT6 1336 aa31.05■■■□□ 2.56
VPS37B-203ENST00000535765 RPS6KA4O75676 772 aa31.04■■■□□ 2.56
VPS37B-203ENST00000535765 CRKLP46109 303 aaKnown RBP31.04■■■□□ 2.56
VPS37B-203ENST00000535765 NFE2L2Q16236 605 aa31.04■■■□□ 2.56
VPS37B-203ENST00000535765 ZNF790Q6PG37 636 aa31.03■■■□□ 2.56
VPS37B-203ENST00000535765 TTC5Q8N0Z6 440 aa31.03■■■□□ 2.56
VPS37B-203ENST00000535765 ADRA2BP18089 450 aa31.02■■■□□ 2.56
VPS37B-203ENST00000535765 WDR43Q15061 677 aaKnown RBP eCLIP31.01■■■□□ 2.55
VPS37B-203ENST00000535765 MCM10Q7L590 875 aa31.01■■■□□ 2.55
VPS37B-203ENST00000535765 DNAJC10Q8IXB1 793 aa31.01■■■□□ 2.55
VPS37B-203ENST00000535765 ARHGEF1Q92888 912 aaKnown RBP31■■■□□ 2.55
VPS37B-203ENST00000535765 BTBD11A6QL63 1104 aa30.99■■■□□ 2.55
VPS37B-203ENST00000535765 RFC4P35249 363 aa30.99■■■□□ 2.55
VPS37B-203ENST00000535765 CYP19A1P11511 503 aaPredicted RBP30.96■■■□□ 2.55
VPS37B-203ENST00000535765 DCTN1Q14203 1278 aa30.96■■■□□ 2.55
VPS37B-203ENST00000535765 TAF7Q15545 349 aaPredicted RBP30.96■■■□□ 2.55
VPS37B-203ENST00000535765 INTS5Q6P9B9 1019 aaKnown RBP30.96■■■□□ 2.55
VPS37B-203ENST00000535765 TEX13AQ9BXU3 409 aaPredicted RBP30.96■■■□□ 2.55
VPS37B-203ENST00000535765 CCDC87Q9NVE4 849 aa30.96■■■□□ 2.55
VPS37B-203ENST00000535765 ADAMTS8Q9UP79 889 aa30.96■■■□□ 2.55
VPS37B-203ENST00000535765 HEG1Q9ULI3 1381 aa30.95■■■□□ 2.55
VPS37B-203ENST00000535765 NLGN2Q8NFZ4 835 aa30.95■■■□□ 2.55
VPS37B-203ENST00000535765 ZNF496Q96IT1 587 aaPredicted RBP30.95■■■□□ 2.55
VPS37B-203ENST00000535765 FMNL2Q96PY5 1086 aa30.95■■■□□ 2.55
VPS37B-203ENST00000535765 NLGN1Q8N2Q7 840 aa30.94■■■□□ 2.54
VPS37B-203ENST00000535765 RUNDC1Q96C34 613 aa30.94■■■□□ 2.54
VPS37B-203ENST00000535765 C4AP0C0L4 1744 aa30.93■■■□□ 2.54
VPS37B-203ENST00000535765 ANP32CO43423 234 aa30.93■■■□□ 2.54
VPS37B-203ENST00000535765 CD2APQ9Y5K6 639 aa30.93■■■□□ 2.54
VPS37B-203ENST00000535765 TMPOP42166 694 aaKnown RBP30.92■■■□□ 2.54
VPS37B-203ENST00000535765 STARD3NLO95772 234 aa30.91■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms