RNA–Protein interactions for RNA: ENST00000535731.1

LRP6-202, Transcript of LDL receptor related protein 6, humanhuman

TSL 3

Gene LRP6, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-202ENST00000535731 RBM46Q8TBY0 533 aaKnown RBP27.23■■□□□ 1.95
LRP6-202ENST00000535731 RTCBQ9Y3I0 505 aaKnown RBP27.23■■□□□ 1.95
LRP6-202ENST00000535731 EMILIN1Q9Y6C2 1016 aa27.23■■□□□ 1.95
LRP6-202ENST00000535731 ATG3Q9NT62 314 aa27.22■■□□□ 1.95
LRP6-202ENST00000535731 FCHSD2O94868 740 aa27.21■■□□□ 1.95
LRP6-202ENST00000535731 IFNL2Q8IZJ0 200 aa27.21■■□□□ 1.95
LRP6-202ENST00000535731 DPEP1P16444 411 aa27.2■■□□□ 1.94
LRP6-202ENST00000535731 NCAPD2Q15021 1401 aa27.2■■□□□ 1.94
LRP6-202ENST00000535731 CCDC87Q9NVE4 849 aa27.2■■□□□ 1.94
LRP6-202ENST00000535731 PKD1L3Q7Z443 1732 aa27.19■■□□□ 1.94
LRP6-202ENST00000535731 PHKG2P15735 406 aa27.19■■□□□ 1.94
LRP6-202ENST00000535731 C16orf71Q8IYS4 520 aaPredicted RBP27.19■■□□□ 1.94
LRP6-202ENST00000535731 PPM1GO15355 546 aaPredicted RBP27.18■■□□□ 1.94
LRP6-202ENST00000535731 RC3H1Q5TC82 1133 aaKnown RBP27.18■■□□□ 1.94
LRP6-202ENST00000535731 KLRG1Q96E93 195 aa27.18■■□□□ 1.94
LRP6-202ENST00000535731 EYA1Q99502 592 aa27.18■■□□□ 1.94
LRP6-202ENST00000535731 ADRA2BP18089 450 aa27.17■■□□□ 1.94
LRP6-202ENST00000535731 ARHGEF1Q92888 912 aaKnown RBP27.17■■□□□ 1.94
LRP6-202ENST00000535731 WASHC2AQ641Q2 1341 aa27.16■■□□□ 1.94
LRP6-202ENST00000535731 C10orf71Q711Q0 1435 aa27.16■■□□□ 1.94
LRP6-202ENST00000535731 FSTL1Q12841 308 aa27.16■■□□□ 1.94
LRP6-202ENST00000535731 C9orf131Q5VYM1 1079 aa27.16■■□□□ 1.94
LRP6-202ENST00000535731 JMYQ8N9B5 988 aa27.16■■□□□ 1.94
LRP6-202ENST00000535731 PARP3Q9Y6F1 533 aa27.16■■□□□ 1.94
LRP6-202ENST00000535731 CDCA8Q53HL2 280 aa27.15■■□□□ 1.94
LRP6-202ENST00000535731 KIF13BQ9NQT8 1826 aa27.15■■□□□ 1.94
LRP6-202ENST00000535731 GYS1P13807 737 aa27.14■■□□□ 1.94
LRP6-202ENST00000535731 KCNA3P22001 575 aa27.14■■□□□ 1.94
LRP6-202ENST00000535731 RFC4P35249 363 aa27.13■■□□□ 1.93
LRP6-202ENST00000535731 COL13A1Q5TAT6 717 aaPredicted RBP27.13■■□□□ 1.93
LRP6-202ENST00000535731 CARD14Q9BXL6 1004 aa27.13■■□□□ 1.93
LRP6-202ENST00000535731 N4BP2Q86UW6 1770 aaPredicted RBP27.12■■□□□ 1.93
LRP6-202ENST00000535731 RPS6KA4O75676 772 aa27.12■■□□□ 1.93
LRP6-202ENST00000535731 HTRA3P83110 453 aa27.12■■□□□ 1.93
LRP6-202ENST00000535731 SLC4A9Q96Q91 983 aa27.12■■□□□ 1.93
LRP6-202ENST00000535731 RBM42Q9BTD8 480 aaKnown RBP27.12■■□□□ 1.93
LRP6-202ENST00000535731 PIM2Q9P1W9 311 aa27.12■■□□□ 1.93
LRP6-202ENST00000535731 KIAA1551Q9HCM1 1747 aa27.12■■□□□ 1.93
LRP6-202ENST00000535731 PLEKHG2Q9H7P9 1386 aa27.11■■□□□ 1.93
LRP6-202ENST00000535731 KDM2BQ8NHM5 1336 aa27.11■■□□□ 1.93
LRP6-202ENST00000535731 ERVV-2B6SEH9 535 aa27.1■■□□□ 1.93
LRP6-202ENST00000535731 KDRP35968 1356 aa27.09■■□□□ 1.93
LRP6-202ENST00000535731 CNTNAP4Q9C0A0 1308 aa27.09■■□□□ 1.93
LRP6-202ENST00000535731 DALRD3Q5D0E6 543 aaKnown RBP27.07■■□□□ 1.92
LRP6-202ENST00000535731 DCAF5Q96JK2 942 aa27.07■■□□□ 1.92
LRP6-202ENST00000535731 RRAGCQ9HB90 399 aa27.07■■□□□ 1.92
LRP6-202ENST00000535731 WDR90Q96KV7 1748 aa27.07■■□□□ 1.92
LRP6-202ENST00000535731 KIF20BQ96Q89 1820 aa27.06■■□□□ 1.92
LRP6-202ENST00000535731 HSP90AB1P08238 724 aaKnown RBP27.05■■□□□ 1.92
LRP6-202ENST00000535731 RNF181Q9P0P0 153 aa27.05■■□□□ 1.92
LRP6-202ENST00000535731 POLKQ9UBT6 870 aa27.05■■□□□ 1.92
LRP6-202ENST00000535731 C4AP0C0L4 1744 aa27.04■■□□□ 1.92
LRP6-202ENST00000535731 TNS4Q8IZW8 715 aa27.02■■□□□ 1.92
LRP6-202ENST00000535731 KCPQ6ZWJ8 1503 aa27.01■■□□□ 1.91
LRP6-202ENST00000535731 CAPN15O75808 1086 aa27.01■■□□□ 1.91
LRP6-202ENST00000535731 EIF4A2Q14240 407 aaKnown RBP27.01■■□□□ 1.91
LRP6-202ENST00000535731 SMC1BQ8NDV3 1235 aa27.01■■□□□ 1.91
LRP6-202ENST00000535731 CABP4P57796 275 aa27■■□□□ 1.91
LRP6-202ENST00000535731 ZNF831Q5JPB2 1677 aa26.99■■□□□ 1.91
LRP6-202ENST00000535731 BRCA1P38398 1863 aaKnown RBP26.98■■□□□ 1.91
LRP6-202ENST00000535731 PRELPP51888 382 aa26.98■■□□□ 1.91
LRP6-202ENST00000535731 FKBP8Q14318 412 aa26.98■■□□□ 1.91
LRP6-202ENST00000535731 PLEKHO1Q53GL0 409 aaPredicted RBP26.98■■□□□ 1.91
LRP6-202ENST00000535731 SRP68Q9UHB9 627 aaKnown RBP26.97■■□□□ 1.91
LRP6-202ENST00000535731 ARFGEF1Q9Y6D6 1849 aa26.97■■□□□ 1.91
LRP6-202ENST00000535731 PTCD1O75127 700 aaKnown RBP26.96■■□□□ 1.91
LRP6-202ENST00000535731 CHRNA5P30532 468 aa26.96■■□□□ 1.91
LRP6-202ENST00000535731 CRKLP46109 303 aaKnown RBP26.96■■□□□ 1.91
LRP6-202ENST00000535731 DDR1Q08345 913 aa26.96■■□□□ 1.91
LRP6-202ENST00000535731 USP42Q9H9J4 1324 aaKnown RBP26.95■■□□□ 1.91
LRP6-202ENST00000535731 ANKRD26Q9UPS8 1709 aa26.95■■□□□ 1.9
LRP6-202ENST00000535731 AMOTQ4VCS5 1084 aa26.94■■□□□ 1.9
LRP6-202ENST00000535731 TM4SF1P30408 202 aa26.93■■□□□ 1.9
LRP6-202ENST00000535731 ZNF530Q6P9A1 599 aaPredicted RBP26.93■■□□□ 1.9
LRP6-202ENST00000535731 ZC3H4Q9UPT8 1303 aaKnown RBP26.92■■□□□ 1.9
LRP6-202ENST00000535731 MTHFSP49914 203 aa26.92■■□□□ 1.9
LRP6-202ENST00000535731 COL5A3P25940 1745 aaPredicted RBP26.91■■□□□ 1.9
LRP6-202ENST00000535731 POLRMTO00411 1230 aaKnown RBP26.91■■□□□ 1.9
LRP6-202ENST00000535731 VEGFAP15692 232 aaPredicted RBP26.91■■□□□ 1.9
LRP6-202ENST00000535731 MYH14Q7Z406 1995 aaKnown RBP26.9■■□□□ 1.9
LRP6-202ENST00000535731 TNNT2P45379 298 aaPredicted RBP26.9■■□□□ 1.9
LRP6-202ENST00000535731 NFATC2IPQ8NCF5 419 aa26.9■■□□□ 1.9
LRP6-202ENST00000535731 GLTPD2A6NH11 291 aa26.89■■□□□ 1.9
LRP6-202ENST00000535731 KDM6AO15550 1401 aaPredicted RBP26.89■■□□□ 1.89
LRP6-202ENST00000535731 ZPR1O75312 459 aa26.87■■□□□ 1.89
LRP6-202ENST00000535731 LMNB1P20700 586 aa26.87■■□□□ 1.89
LRP6-202ENST00000535731 C1orf141Q5JVX7 400 aa26.87■■□□□ 1.89
LRP6-202ENST00000535731 INTS5Q6P9B9 1019 aaKnown RBP26.87■■□□□ 1.89
LRP6-202ENST00000535731 TNRC6CQ9HCJ0 1690 aaKnown RBP26.86■■□□□ 1.89
LRP6-202ENST00000535731 HSPA1AP0DMV8 641 aaKnown RBP26.86■■□□□ 1.89
LRP6-202ENST00000535731 HSPA1BP0DMV9 641 aaKnown RBP26.86■■□□□ 1.89
LRP6-202ENST00000535731 RASSF7Q02833 373 aa26.86■■□□□ 1.89
LRP6-202ENST00000535731 TRIM26Q12899 539 aaPredicted RBP26.85■■□□□ 1.89
LRP6-202ENST00000535731 USPL1Q5W0Q7 1092 aa26.84■■□□□ 1.89
LRP6-202ENST00000535731 SBF1O95248 1867 aa26.84■■□□□ 1.89
LRP6-202ENST00000535731 TTLL6Q8N841 843 aa26.81■■□□□ 1.88
LRP6-202ENST00000535731 PCNTO95613 3336 aa26.8■■□□□ 1.88
LRP6-202ENST00000535731 NFIXQ14938 502 aa26.79■■□□□ 1.88
LRP6-202ENST00000535731 DNAJC10Q8IXB1 793 aa26.79■■□□□ 1.88
LRP6-202ENST00000535731 NARFQ9UHQ1 456 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms