RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 RIPK4P57078 832 aa15.92■□□□□ 0.14
CHD4-203ENST00000535717 DCTN1Q14203 1278 aa15.92■□□□□ 0.14
CHD4-203ENST00000535717 PROM2Q8N271 834 aa15.92■□□□□ 0.14
CHD4-203ENST00000535717 RTF1Q92541 710 aaKnown RBP15.92■□□□□ 0.14
CHD4-203ENST00000535717 ASAP1Q9ULH1 1129 aa15.92■□□□□ 0.14
CHD4-203ENST00000535717 RGPD3A6NKT7 1758 aaPredicted RBP15.92■□□□□ 0.14
CHD4-203ENST00000535717 RGPD4Q7Z3J3 1758 aa15.92■□□□□ 0.14
CHD4-203ENST00000535717 APAF1O14727 1248 aa15.91■□□□□ 0.14
CHD4-203ENST00000535717 NEUROD2Q15784 382 aa15.91■□□□□ 0.14
CHD4-203ENST00000535717 ATG3Q9NT62 314 aa15.91■□□□□ 0.14
CHD4-203ENST00000535717 TEFQ10587 303 aa15.9■□□□□ 0.14
CHD4-203ENST00000535717 TXNRD1Q16881 649 aa15.9■□□□□ 0.14
CHD4-203ENST00000535717 PALLDQ8WX93 1383 aa15.89■□□□□ 0.13
CHD4-203ENST00000535717 SMARCC1Q92922 1105 aaPredicted RBP15.89■□□□□ 0.13
CHD4-203ENST00000535717 THUMPD2Q9BTF0 503 aaKnown RBP15.89■□□□□ 0.13
CHD4-203ENST00000535717 TRIM35Q9UPQ4 493 aa15.89■□□□□ 0.13
CHD4-203ENST00000535717 RREB1Q92766 1687 aa15.89■□□□□ 0.13
CHD4-203ENST00000535717 LY75O60449 1722 aa15.88■□□□□ 0.13
CHD4-203ENST00000535717 SIPA1L3O60292 1781 aaPredicted RBP15.88■□□□□ 0.13
CHD4-203ENST00000535717 SENP3-EIF4A1A0A087X0R7 540 aa15.87■□□□□ 0.13
CHD4-203ENST00000535717 KCNQ4P56696 695 aa15.87■□□□□ 0.13
CHD4-203ENST00000535717 LMOD3Q0VAK6 560 aa15.87■□□□□ 0.13
CHD4-203ENST00000535717 LRRC4BQ9NT99 713 aa15.87■□□□□ 0.13
CHD4-203ENST00000535717 SLC39A6Q13433 755 aa15.86■□□□□ 0.13
CHD4-203ENST00000535717 SLC27A3Q5K4L6 730 aa15.86■□□□□ 0.13
CHD4-203ENST00000535717 PAPPAQ13219 1627 aa15.86■□□□□ 0.13
CHD4-203ENST00000535717 NUP188Q5SRE5 1749 aa15.85■□□□□ 0.13
CHD4-203ENST00000535717 TAF7Q15545 349 aaPredicted RBP15.85■□□□□ 0.13
CHD4-203ENST00000535717 CCNL1Q9UK58 526 aaPredicted RBP15.85■□□□□ 0.13
CHD4-203ENST00000535717 LOC102724428A0A0B4J2F2 783 aa15.84■□□□□ 0.13
CHD4-203ENST00000535717 BTBD11A6QL63 1104 aa15.84■□□□□ 0.13
CHD4-203ENST00000535717 PTCD1O75127 700 aaKnown RBP15.84■□□□□ 0.13
CHD4-203ENST00000535717 SIK1P57059 783 aa15.84■□□□□ 0.13
CHD4-203ENST00000535717 SLC4A9Q96Q91 983 aa15.84■□□□□ 0.13
CHD4-203ENST00000535717 RBM42Q9BTD8 480 aaKnown RBP15.84■□□□□ 0.13
CHD4-203ENST00000535717 ZNF790Q6PG37 636 aa15.83■□□□□ 0.12
CHD4-203ENST00000535717 MIS18AQ9NYP9 233 aa15.83■□□□□ 0.12
CHD4-203ENST00000535717 KCPQ6ZWJ8 1503 aa15.83■□□□□ 0.12
CHD4-203ENST00000535717 KCNQ3O43525 872 aa15.82■□□□□ 0.12
CHD4-203ENST00000535717 ATP6V1AP38606 617 aa15.81■□□□□ 0.12
CHD4-203ENST00000535717 ITPK1Q13572 414 aa15.81■□□□□ 0.12
CHD4-203ENST00000535717 CCDC27Q2M243 656 aa15.81■□□□□ 0.12
CHD4-203ENST00000535717 NCBP3Q53F19 620 aaKnown RBP15.81■□□□□ 0.12
CHD4-203ENST00000535717 UBR2Q8IWV8 1755 aa15.81■□□□□ 0.12
CHD4-203ENST00000535717 TTC5Q8N0Z6 440 aa15.81■□□□□ 0.12
CHD4-203ENST00000535717 ANO8Q9HCE9 1232 aaPredicted RBP15.81■□□□□ 0.12
CHD4-203ENST00000535717 ZNF496Q96IT1 587 aaPredicted RBP15.8■□□□□ 0.12
CHD4-203ENST00000535717 SALL2Q9Y467 1007 aaPredicted RBP15.8■□□□□ 0.12
CHD4-203ENST00000535717 ZNF831Q5JPB2 1677 aa15.79■□□□□ 0.12
CHD4-203ENST00000535717 NBPF14Q5TI25 921 aa15.79■□□□□ 0.12
CHD4-203ENST00000535717 WWC1Q8IX03 1113 aa15.79■□□□□ 0.12
CHD4-203ENST00000535717 LINC00116Q8NCU8 138 aa15.79■□□□□ 0.12
CHD4-203ENST00000535717 TAF1LQ8IZX4 1826 aa15.79■□□□□ 0.12
CHD4-203ENST00000535717 C5P01031 1676 aa15.79■□□□□ 0.12
CHD4-203ENST00000535717 KDM3BQ7LBC6 1761 aa15.78■□□□□ 0.12
CHD4-203ENST00000535717 ZNF827Q17R98 1081 aa15.78■□□□□ 0.12
CHD4-203ENST00000535717 AKT1S1Q96B36 256 aa15.78■□□□□ 0.12
CHD4-203ENST00000535717 FMNL2Q96PY5 1086 aa15.78■□□□□ 0.12
CHD4-203ENST00000535717 TJP1Q07157 1748 aa15.77■□□□□ 0.12
CHD4-203ENST00000535717 CHL1O00533 1208 aa15.77■□□□□ 0.12
CHD4-203ENST00000535717 VSIG10Q8N0Z9 540 aa15.77■□□□□ 0.12
CHD4-203ENST00000535717 BABAM1Q9NWV8 329 aa15.77■□□□□ 0.12
CHD4-203ENST00000535717 STK32BQ9NY57 414 aa15.77■□□□□ 0.12
CHD4-203ENST00000535717 TSPYL4Q9UJ04 414 aa15.77■□□□□ 0.12
CHD4-203ENST00000535717 LAS1LQ9Y4W2 734 aaKnown RBP15.77■□□□□ 0.12
CHD4-203ENST00000535717 HEG1Q9ULI3 1381 aa15.76■□□□□ 0.11
CHD4-203ENST00000535717 CICQ96RK0 1608 aaPredicted RBP15.76■□□□□ 0.11
CHD4-203ENST00000535717 ZNF853P0CG23 659 aa15.76■□□□□ 0.11
CHD4-203ENST00000535717 CALD1Q05682 793 aaKnown RBP15.76■□□□□ 0.11
CHD4-203ENST00000535717 R3HDM1Q15032 1099 aaKnown RBP15.76■□□□□ 0.11
CHD4-203ENST00000535717 SLC15A2Q16348 729 aa15.76■□□□□ 0.11
CHD4-203ENST00000535717 DNAJC10Q8IXB1 793 aa15.76■□□□□ 0.11
CHD4-203ENST00000535717 NGEFQ8N5V2 710 aa15.76■□□□□ 0.11
CHD4-203ENST00000535717 CFAP44Q96MT7 982 aa15.76■□□□□ 0.11
CHD4-203ENST00000535717 C4BP0C0L5 1744 aa15.76■□□□□ 0.11
CHD4-203ENST00000535717 COL5A3P25940 1745 aaPredicted RBP15.75■□□□□ 0.11
CHD4-203ENST00000535717 PSDA5PKW4 1024 aaPredicted RBP15.75■□□□□ 0.11
CHD4-203ENST00000535717 HMGB2P26583 209 aaKnown RBP15.75■□□□□ 0.11
CHD4-203ENST00000535717 EIF4A1P60842 406 aaKnown RBP15.75■□□□□ 0.11
CHD4-203ENST00000535717 IFT57Q9NWB7 429 aa15.75■□□□□ 0.11
CHD4-203ENST00000535717 CYP19A1P11511 503 aaPredicted RBP15.74■□□□□ 0.11
CHD4-203ENST00000535717 PRAMEF22A3QJZ6 481 aa15.73■□□□□ 0.11
CHD4-203ENST00000535717 SNRPA1P09661 255 aaKnown RBP15.73■□□□□ 0.11
CHD4-203ENST00000535717 GNAI1P63096 354 aa15.73■□□□□ 0.11
CHD4-203ENST00000535717 WDR63Q8IWG1 891 aa15.73■□□□□ 0.11
CHD4-203ENST00000535717 AK7Q96M32 723 aa15.73■□□□□ 0.11
CHD4-203ENST00000535717 MBIPQ9NS73 344 aa15.73■□□□□ 0.11
CHD4-203ENST00000535717 TFCP2L1Q9NZI6 479 aa15.73■□□□□ 0.11
CHD4-203ENST00000535717 IL16Q14005 1332 aa15.72■□□□□ 0.11
CHD4-203ENST00000535717 ZNF521Q96K83 1311 aa15.72■□□□□ 0.11
CHD4-203ENST00000535717 CNTNAP4Q9C0A0 1308 aa15.72■□□□□ 0.11
CHD4-203ENST00000535717 CRKLP46109 303 aaKnown RBP15.72■□□□□ 0.11
CHD4-203ENST00000535717 RC3H1Q5TC82 1133 aaKnown RBP15.72■□□□□ 0.11
CHD4-203ENST00000535717 INTS5Q6P9B9 1019 aaKnown RBP15.72■□□□□ 0.11
CHD4-203ENST00000535717 AMIGO3Q86WK7 504 aa15.72■□□□□ 0.11
CHD4-203ENST00000535717 TEX13AQ9BXU3 409 aaPredicted RBP15.72■□□□□ 0.11
CHD4-203ENST00000535717 MYH14Q7Z406 1995 aaKnown RBP15.72■□□□□ 0.11
CHD4-203ENST00000535717 TUBGCP6Q96RT7 1819 aa15.71■□□□□ 0.11
CHD4-203ENST00000535717 GIGYF1O75420 1035 aaPredicted RBP15.71■□□□□ 0.11
CHD4-203ENST00000535717 STARD3NLO95772 234 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms