RNA–Protein interactions for RNA: ENST00000535174.5

DDB1-205, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-205ENST00000535174 IFNL2Q8IZJ0 200 aa22.76■■□□□ 1.23
DDB1-205ENST00000535174 UBR3Q6ZT12 1888 aa22.76■■□□□ 1.23
DDB1-205ENST00000535174 PHF14O94880 888 aa22.74■■□□□ 1.23
DDB1-205ENST00000535174 PHKG2P15735 406 aa22.74■■□□□ 1.23
DDB1-205ENST00000535174 PLEKHG2Q9H7P9 1386 aa22.73■■□□□ 1.23
DDB1-205ENST00000535174 LOC102724428A0A0B4J2F2 783 aa22.72■■□□□ 1.23
DDB1-205ENST00000535174 PPP2R1AP30153 589 aa22.72■■□□□ 1.23
DDB1-205ENST00000535174 SIK1P57059 783 aa22.72■■□□□ 1.23
DDB1-205ENST00000535174 IGSF1Q8N6C5 1336 aa22.72■■□□□ 1.23
DDB1-205ENST00000535174 PNISRQ8TF01 805 aaKnown RBP22.71■■□□□ 1.23
DDB1-205ENST00000535174 MORC1Q86VD1 984 aa22.7■■□□□ 1.22
DDB1-205ENST00000535174 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.69■■□□□ 1.22
DDB1-205ENST00000535174 LINC00116Q8NCU8 138 aa22.69■■□□□ 1.22
DDB1-205ENST00000535174 ASAP1Q9ULH1 1129 aa22.69■■□□□ 1.22
DDB1-205ENST00000535174 SSFA2P28290 1259 aa22.68■■□□□ 1.22
DDB1-205ENST00000535174 ATP6V1AP38606 617 aa22.68■■□□□ 1.22
DDB1-205ENST00000535174 FAM9BQ8IZU0 186 aa22.68■■□□□ 1.22
DDB1-205ENST00000535174 AMIGO3Q86WK7 504 aa22.67■■□□□ 1.22
DDB1-205ENST00000535174 GOLGB1Q14789 3259 aaKnown RBP22.66■■□□□ 1.22
DDB1-205ENST00000535174 GNPATO15228 680 aa22.66■■□□□ 1.22
DDB1-205ENST00000535174 GRIN3BO60391 1043 aa22.66■■□□□ 1.22
DDB1-205ENST00000535174 HSP90AB1P08238 724 aaKnown RBP22.66■■□□□ 1.22
DDB1-205ENST00000535174 PLEKHO1Q53GL0 409 aaPredicted RBP22.66■■□□□ 1.22
DDB1-205ENST00000535174 SMIM5Q71RC9 77 aa22.66■■□□□ 1.22
DDB1-205ENST00000535174 CD2APQ9Y5K6 639 aa22.66■■□□□ 1.22
DDB1-205ENST00000535174 YBX3P16989 372 aaKnown RBP eCLIP22.65■■□□□ 1.223e-12■□□□□ 10.5
DDB1-205ENST00000535174 ITPK1Q13572 414 aa22.65■■□□□ 1.22
DDB1-205ENST00000535174 ZNF530Q6P9A1 599 aaPredicted RBP22.65■■□□□ 1.22
DDB1-205ENST00000535174 ATG3Q9NT62 314 aa22.65■■□□□ 1.22
DDB1-205ENST00000535174 DCAF5Q96JK2 942 aa22.63■■□□□ 1.21
DDB1-205ENST00000535174 KDRP35968 1356 aa22.63■■□□□ 1.21
DDB1-205ENST00000535174 ZNF831Q5JPB2 1677 aa22.62■■□□□ 1.21
DDB1-205ENST00000535174 ERVV-2B6SEH9 535 aa22.62■■□□□ 1.21
DDB1-205ENST00000535174 AMOTQ4VCS5 1084 aa22.62■■□□□ 1.21
DDB1-205ENST00000535174 RBM42Q9BTD8 480 aaKnown RBP22.62■■□□□ 1.21
DDB1-205ENST00000535174 KDM6AO15550 1401 aaPredicted RBP22.62■■□□□ 1.21
DDB1-205ENST00000535174 COL5A3P25940 1745 aaPredicted RBP22.61■■□□□ 1.21
DDB1-205ENST00000535174 HNRNPUQ00839 825 aaKnown RBP eCLIP22.61■■□□□ 1.21
DDB1-205ENST00000535174 C1orf141Q5JVX7 400 aa22.61■■□□□ 1.21
DDB1-205ENST00000535174 AEBP1Q8IUX7 1158 aa22.61■■□□□ 1.21
DDB1-205ENST00000535174 CABP4P57796 275 aa22.6■■□□□ 1.21
DDB1-205ENST00000535174 GIGYF1O75420 1035 aaPredicted RBP22.58■■□□□ 1.21
DDB1-205ENST00000535174 SULT6B1Q6IMI4 303 aa22.58■■□□□ 1.21
DDB1-205ENST00000535174 RTCBQ9Y3I0 505 aaKnown RBP22.58■■□□□ 1.21
DDB1-205ENST00000535174 MTHFSP49914 203 aa22.57■■□□□ 1.2
DDB1-205ENST00000535174 WWC3Q9ULE0 1092 aa22.57■■□□□ 1.2
DDB1-205ENST00000535174 C1QTNF8P60827 252 aa22.56■■□□□ 1.2
DDB1-205ENST00000535174 ZBED9Q6R2W3 1325 aa22.56■■□□□ 1.2
DDB1-205ENST00000535174 SENP3-EIF4A1A0A087X0R7 540 aa22.55■■□□□ 1.2
DDB1-205ENST00000535174 CICQ96RK0 1608 aaPredicted RBP22.55■■□□□ 1.2
DDB1-205ENST00000535174 SCN11AQ9UI33 1791 aa22.54■■□□□ 1.2
DDB1-205ENST00000535174 MMP10P09238 476 aa22.54■■□□□ 1.2
DDB1-205ENST00000535174 TRAPPC3LQ5T215 181 aa22.54■■□□□ 1.2
DDB1-205ENST00000535174 SLC4A9Q96Q91 983 aa22.54■■□□□ 1.2
DDB1-205ENST00000535174 C4AP0C0L4 1744 aa22.54■■□□□ 1.2
DDB1-205ENST00000535174 CFAP53Q96M91 514 aa22.53■■□□□ 1.2
DDB1-205ENST00000535174 CNTNAP4Q9C0A0 1308 aa22.53■■□□□ 1.2
DDB1-205ENST00000535174 ATP10DQ9P241 1426 aa22.52■■□□□ 1.2
DDB1-205ENST00000535174 PTCD1O75127 700 aaKnown RBP22.52■■□□□ 1.2
DDB1-205ENST00000535174 IL13P35225 146 aa22.52■■□□□ 1.2
DDB1-205ENST00000535174 WDR43Q15061 677 aaKnown RBP eCLIP22.52■■□□□ 1.2
DDB1-205ENST00000535174 ADRA2BP18089 450 aa22.51■■□□□ 1.19
DDB1-205ENST00000535174 TJP1Q07157 1748 aa22.51■■□□□ 1.19
DDB1-205ENST00000535174 RFC4P35249 363 aa22.5■■□□□ 1.19
DDB1-205ENST00000535174 RC3H1Q5TC82 1133 aaKnown RBP22.5■■□□□ 1.19
DDB1-205ENST00000535174 NFATC2IPQ8NCF5 419 aa22.5■■□□□ 1.19
DDB1-205ENST00000535174 KIF13BQ9NQT8 1826 aa22.5■■□□□ 1.19
DDB1-205ENST00000535174 NLGN1Q8N2Q7 840 aa22.49■■□□□ 1.19
DDB1-205ENST00000535174 VIRMAQ69YN4 1812 aaKnown RBP22.49■■□□□ 1.19
DDB1-205ENST00000535174 RPS6KA4O75676 772 aa22.48■■□□□ 1.19
DDB1-205ENST00000535174 ARHGEF1Q92888 912 aaKnown RBP22.48■■□□□ 1.19
DDB1-205ENST00000535174 MYH14Q7Z406 1995 aaKnown RBP22.48■■□□□ 1.19
DDB1-205ENST00000535174 N4BP2Q86UW6 1770 aaPredicted RBP22.48■■□□□ 1.19
DDB1-205ENST00000535174 PXDNLA1KZ92 1463 aa22.47■■□□□ 1.19
DDB1-205ENST00000535174 HMOX1P09601 288 aa22.47■■□□□ 1.19
DDB1-205ENST00000535174 AKAP4Q5JQC9 854 aa22.47■■□□□ 1.19
DDB1-205ENST00000535174 KIAA1551Q9HCM1 1747 aa22.47■■□□□ 1.19
DDB1-205ENST00000535174 C10orf71Q711Q0 1435 aa22.46■■□□□ 1.19
DDB1-205ENST00000535174 GYS1P13807 737 aa22.45■■□□□ 1.18
DDB1-205ENST00000535174 CRKLP46109 303 aaKnown RBP22.45■■□□□ 1.18
DDB1-205ENST00000535174 CCDC87Q9NVE4 849 aa22.45■■□□□ 1.18
DDB1-205ENST00000535174 PARP3Q9Y6F1 533 aa22.45■■□□□ 1.18
DDB1-205ENST00000535174 ADCY9O60503 1353 aa22.44■■□□□ 1.18
DDB1-205ENST00000535174 COL3A1P02461 1466 aaPredicted RBP22.44■■□□□ 1.18
DDB1-205ENST00000535174 MRC1P22897 1456 aa22.44■■□□□ 1.18
DDB1-205ENST00000535174 ZNF526Q8TF50 670 aaPredicted RBP22.44■■□□□ 1.18
DDB1-205ENST00000535174 GPBP1L1Q9HC44 474 aaPredicted RBP22.44■■□□□ 1.18
DDB1-205ENST00000535174 ADAMTS8Q9UP79 889 aa22.44■■□□□ 1.18
DDB1-205ENST00000535174 DIAPH1O60610 1272 aaKnown RBP22.43■■□□□ 1.18
DDB1-205ENST00000535174 SLC52A2Q9HAB3 445 aa22.43■■□□□ 1.18
DDB1-205ENST00000535174 TGFB2P61812 414 aa22.41■■□□□ 1.18
DDB1-205ENST00000535174 BCS1LQ9Y276 419 aa22.41■■□□□ 1.18
DDB1-205ENST00000535174 USP42Q9H9J4 1324 aaKnown RBP22.39■■□□□ 1.18
DDB1-205ENST00000535174 A0A0G2JLW4 131 aa22.39■■□□□ 1.17
DDB1-205ENST00000535174 RNMTO43148 476 aaKnown RBP22.39■■□□□ 1.17
DDB1-205ENST00000535174 LGR6Q9HBX8 967 aa22.39■■□□□ 1.17
DDB1-205ENST00000535174 SRP68Q9UHB9 627 aaKnown RBP22.39■■□□□ 1.17
DDB1-205ENST00000535174 ADAMTS7Q9UKP4 1686 aa22.39■■□□□ 1.17
DDB1-205ENST00000535174 DNAJC10Q8IXB1 793 aa22.38■■□□□ 1.17
DDB1-205ENST00000535174 NGEFQ8N5V2 710 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms