RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 CD46P15529 392 aa2.88□□□□□ -1.95
COPB1-212ENST00000534771 PRR23CQ6ZRP0 262 aa2.88□□□□□ -1.95
COPB1-212ENST00000534771 ABI1Q8IZP0 508 aa2.88□□□□□ -1.95
COPB1-212ENST00000534771 KDF1Q8NAX2 398 aaPredicted RBP2.88□□□□□ -1.95
COPB1-212ENST00000534771 C1QTNF2Q9BXJ5 285 aa2.88□□□□□ -1.95
COPB1-212ENST00000534771 TIMMDC1Q9NPL8 285 aa2.88□□□□□ -1.95
COPB1-212ENST00000534771 ATXN7L1Q9ULK2 861 aaPredicted RBP2.88□□□□□ -1.95
COPB1-212ENST00000534771 GPR37O15354 613 aa2.87□□□□□ -1.95
COPB1-212ENST00000534771 ADH1AP07327 375 aa2.87□□□□□ -1.95
COPB1-212ENST00000534771 ADH6P28332 368 aa2.87□□□□□ -1.95
COPB1-212ENST00000534771 TTLL10Q6ZVT0 673 aa2.87□□□□□ -1.95
COPB1-212ENST00000534771 GPAMQ9HCL2 828 aa2.87□□□□□ -1.95
COPB1-212ENST00000534771 RTN4Q9NQC3 1192 aaKnown RBP2.87□□□□□ -1.95
COPB1-212ENST00000534771 USP21Q9UK80 565 aa2.87□□□□□ -1.95
COPB1-212ENST00000534771 MAGEB6P1A0A0J9YX57 407 aa2.86□□□□□ -1.95
COPB1-212ENST00000534771 OVOL3O00110 214 aa2.86□□□□□ -1.95
COPB1-212ENST00000534771 SPINK2P20155 84 aa2.86□□□□□ -1.95
COPB1-212ENST00000534771 ADD1P35611 737 aaKnown RBP2.86□□□□□ -1.95
COPB1-212ENST00000534771 DHX9Q08211 1270 aaKnown RBP2.86□□□□□ -1.95
COPB1-212ENST00000534771 UBAP2LQ14157 1087 aaKnown RBP2.86□□□□□ -1.95
COPB1-212ENST00000534771 TRAPPC3LQ5T215 181 aa2.86□□□□□ -1.95
COPB1-212ENST00000534771 NBPF14Q5TI25 921 aa2.86□□□□□ -1.95
COPB1-212ENST00000534771 NBPF10Q6P3W6 841 aaKnown RBP2.86□□□□□ -1.95
COPB1-212ENST00000534771 TRMT44Q8IYL2 757 aaKnown RBP2.86□□□□□ -1.95
COPB1-212ENST00000534771 NBPF15Q8N660 670 aa2.86□□□□□ -1.95
COPB1-212ENST00000534771 BNIP3LO60238 219 aa2.85□□□□□ -1.95
COPB1-212ENST00000534771 GGNQ86UU5 652 aa2.85□□□□□ -1.95
COPB1-212ENST00000534771 GPIHBP1Q8IV16 184 aa2.85□□□□□ -1.95
COPB1-212ENST00000534771 IRF6O14896 467 aa2.84□□□□□ -1.95
COPB1-212ENST00000534771 FARP2O94887 1054 aaPredicted RBP2.84□□□□□ -1.95
COPB1-212ENST00000534771 CTSWP56202 376 aa2.84□□□□□ -1.95
COPB1-212ENST00000534771 MDM2Q00987 491 aaPredicted RBP2.84□□□□□ -1.95
COPB1-212ENST00000534771 MAP2K5Q13163 448 aa2.84□□□□□ -1.95
COPB1-212ENST00000534771 LCNL1Q6ZST4 164 aa2.84□□□□□ -1.95
COPB1-212ENST00000534771 C8orf86Q6ZUL3 223 aa2.84□□□□□ -1.95
COPB1-212ENST00000534771 NUTM1Q86Y26 1132 aa2.84□□□□□ -1.95
COPB1-212ENST00000534771 KSR1Q8IVT5 923 aa2.84□□□□□ -1.95
COPB1-212ENST00000534771 KRI1Q8N9T8 703 aaKnown RBP2.84□□□□□ -1.95
COPB1-212ENST00000534771 PRR7Q8TB68 274 aa2.84□□□□□ -1.95
COPB1-212ENST00000534771 KCTD15Q96SI1 283 aaPredicted RBP2.84□□□□□ -1.95
COPB1-212ENST00000534771 TMPRSS4Q9NRS4 437 aa2.84□□□□□ -1.95
COPB1-212ENST00000534771 MAP10Q9P2G4 905 aa2.84□□□□□ -1.95
COPB1-212ENST00000534771 M0R082 166 aa2.83□□□□□ -1.96
COPB1-212ENST00000534771 MEN1O00255 615 aa2.83□□□□□ -1.96
COPB1-212ENST00000534771 JUNBP17275 347 aaPredicted RBP2.83□□□□□ -1.96
COPB1-212ENST00000534771 ALAS2P22557 587 aa2.83□□□□□ -1.96
COPB1-212ENST00000534771 IREB2P48200 963 aaKnown RBP2.83□□□□□ -1.96
COPB1-212ENST00000534771 PCBP4P57723 403 aaKnown RBP2.83□□□□□ -1.96
COPB1-212ENST00000534771 SLC27A3Q5K4L6 730 aa2.83□□□□□ -1.96
COPB1-212ENST00000534771 INTS5Q6P9B9 1019 aaKnown RBP2.83□□□□□ -1.96
COPB1-212ENST00000534771 DTX1Q86Y01 620 aa2.83□□□□□ -1.96
COPB1-212ENST00000534771 ZDHHC13Q8IUH4 622 aa2.83□□□□□ -1.96
COPB1-212ENST00000534771 ZNF417Q8TAU3 575 aa2.83□□□□□ -1.96
COPB1-212ENST00000534771 WFDC12Q8WWY7 111 aa2.83□□□□□ -1.96
COPB1-212ENST00000534771 ZNF587Q96SQ5 575 aaPredicted RBP2.83□□□□□ -1.96
COPB1-212ENST00000534771 CARD14Q9BXL6 1004 aa2.83□□□□□ -1.96
COPB1-212ENST00000534771 LMCD1Q9NZU5 365 aa2.83□□□□□ -1.96
COPB1-212ENST00000534771 PCDHGC3Q9UN70 934 aa2.83□□□□□ -1.96
COPB1-212ENST00000534771 MINK1Q8N4C8 1332 aaPredicted RBP2.83□□□□□ -1.96
COPB1-212ENST00000534771 ATP5J2-PTCD1G3V325 749 aa2.82□□□□□ -1.96
COPB1-212ENST00000534771 PTCD1O75127 700 aaKnown RBP2.82□□□□□ -1.96
COPB1-212ENST00000534771 FDX1P10109 184 aa2.82□□□□□ -1.96
COPB1-212ENST00000534771 ITGB5P18084 799 aa2.82□□□□□ -1.96
COPB1-212ENST00000534771 CFPP27918 469 aa2.82□□□□□ -1.96
COPB1-212ENST00000534771 GRIK1P39086 918 aa2.82□□□□□ -1.96
COPB1-212ENST00000534771 ECM1Q16610 540 aa2.82□□□□□ -1.96
COPB1-212ENST00000534771 GPCPD1Q9NPB8 672 aa2.82□□□□□ -1.96
COPB1-212ENST00000534771 NDFIP2Q9NV92 336 aa2.82□□□□□ -1.96
COPB1-212ENST00000534771 TULP1O00294 542 aaPredicted RBP2.81□□□□□ -1.96
COPB1-212ENST00000534771 GPC1P35052 558 aa2.81□□□□□ -1.96
COPB1-212ENST00000534771 CLCN1P35523 988 aa2.81□□□□□ -1.96
COPB1-212ENST00000534771 ZNF784Q8NCA9 323 aaPredicted RBP2.81□□□□□ -1.96
COPB1-212ENST00000534771 RUBCNLQ9H714 662 aa2.81□□□□□ -1.96
COPB1-212ENST00000534771 FAM217BQ9NTX9 383 aaPredicted RBP2.81□□□□□ -1.96
COPB1-212ENST00000534771 RAPGEFL1Q9UHV5 662 aa2.81□□□□□ -1.96
COPB1-212ENST00000534771 A0A0A0MRY4 1105 aa2.8□□□□□ -1.96
COPB1-212ENST00000534771 SPDYE5A6NIY4 337 aa2.8□□□□□ -1.96
COPB1-212ENST00000534771 CSB-PGBD3P0DP91 1061 aa2.8□□□□□ -1.96
COPB1-212ENST00000534771 NOS3P29474 1203 aa2.8□□□□□ -1.96
COPB1-212ENST00000534771 LYPD8Q6UX82 237 aa2.8□□□□□ -1.96
COPB1-212ENST00000534771 CBLL1Q75N03 491 aa2.8□□□□□ -1.96
COPB1-212ENST00000534771 PGBD3Q8N328 593 aa2.8□□□□□ -1.96
COPB1-212ENST00000534771 TOX2Q96NM4 488 aa2.8□□□□□ -1.96
COPB1-212ENST00000534771 SLC38A3Q99624 504 aa2.8□□□□□ -1.96
COPB1-212ENST00000534771 ELOA3CA0A087WX78 387 aaPredicted RBP2.79□□□□□ -1.96
COPB1-212ENST00000534771 ELOA3DA6NLF2 546 aaPredicted RBP2.79□□□□□ -1.96
COPB1-212ENST00000534771 LILRA1O75019 489 aa2.79□□□□□ -1.96
COPB1-212ENST00000534771 ZSCAN22P10073 491 aaPredicted RBP2.79□□□□□ -1.96
COPB1-212ENST00000534771 NID1P14543 1247 aa2.79□□□□□ -1.96
COPB1-212ENST00000534771 NDUFV2P19404 249 aa2.79□□□□□ -1.96
COPB1-212ENST00000534771 SSTR3P32745 418 aaPredicted RBP2.79□□□□□ -1.96
COPB1-212ENST00000534771 MTMR2Q13614 643 aa2.79□□□□□ -1.96
COPB1-212ENST00000534771 ELOA3BQ3SY89 546 aa2.79□□□□□ -1.96
COPB1-212ENST00000534771 ERFEQ4G0M1 354 aa2.79□□□□□ -1.96
COPB1-212ENST00000534771 WDR44Q5JSH3 913 aa2.79□□□□□ -1.96
COPB1-212ENST00000534771 INTS6LQ5JSJ4 861 aaKnown RBP2.79□□□□□ -1.96
COPB1-212ENST00000534771 DESI1Q6ICB0 168 aa2.79□□□□□ -1.96
COPB1-212ENST00000534771 TAS1R3Q7RTX0 852 aa2.79□□□□□ -1.96
COPB1-212ENST00000534771 SIAH1Q8IUQ4 282 aa2.79□□□□□ -1.96
COPB1-212ENST00000534771 ELOA3Q8NG57 546 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms