RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 IFT57Q9NWB7 429 aa11.26□□□□□ -0.61
SF3B2-216ENST00000534765 C1orf115Q9H7X2 142 aa11.26□□□□□ -0.61
SF3B2-216ENST00000534765 ATF3P18847 181 aa11.26□□□□□ -0.61
SF3B2-216ENST00000534765 NECTIN2Q92692 538 aa11.26□□□□□ -0.61
SF3B2-216ENST00000534765 IGSF3O75054 1194 aa11.25□□□□□ -0.61
SF3B2-216ENST00000534765 TWISTNBQ3B726 338 aaPredicted RBP11.25□□□□□ -0.61
SF3B2-216ENST00000534765 NCAPD2Q15021 1401 aa11.25□□□□□ -0.61
SF3B2-216ENST00000534765 ANKRD24Q8TF21 1146 aa11.25□□□□□ -0.61
SF3B2-216ENST00000534765 MEGF6O75095 1541 aa11.25□□□□□ -0.61
SF3B2-216ENST00000534765 PDE3AQ14432 1141 aa11.24□□□□□ -0.61
SF3B2-216ENST00000534765 DHX37Q8IY37 1157 aaKnown RBP11.24□□□□□ -0.61
SF3B2-216ENST00000534765 SIPA1L3O60292 1781 aaPredicted RBP11.24□□□□□ -0.61
SF3B2-216ENST00000534765 FAM161AQ3B820 660 aa11.24□□□□□ -0.61
SF3B2-216ENST00000534765 ATF7IPQ6VMQ6 1270 aa11.24□□□□□ -0.61
SF3B2-216ENST00000534765 KIAA0232Q92628 1395 aa11.24□□□□□ -0.61
SF3B2-216ENST00000534765 SPATA31A3Q5VYP0 1347 aa11.23□□□□□ -0.61
SF3B2-216ENST00000534765 DCCP43146 1447 aa11.23□□□□□ -0.61
SF3B2-216ENST00000534765 MVPQ14764 893 aaKnown RBP11.23□□□□□ -0.61
SF3B2-216ENST00000534765 KDM3BQ7LBC6 1761 aa11.23□□□□□ -0.61
SF3B2-216ENST00000534765 CBX1P83916 185 aa11.23□□□□□ -0.61
SF3B2-216ENST00000534765 MPRIPQ6WCQ1 1025 aa11.23□□□□□ -0.61
SF3B2-216ENST00000534765 SIRT2Q8IXJ6 389 aa11.23□□□□□ -0.61
SF3B2-216ENST00000534765 SLAIN2Q9P270 581 aa11.23□□□□□ -0.61
SF3B2-216ENST00000534765 ERBB3P21860 1342 aa11.23□□□□□ -0.61
SF3B2-216ENST00000534765 UTRNP46939 3433 aa11.23□□□□□ -0.61
SF3B2-216ENST00000534765 CGNQ9P2M7 1197 aaKnown RBP11.23□□□□□ -0.61
SF3B2-216ENST00000534765 TNS3Q68CZ2 1445 aa11.22□□□□□ -0.61
SF3B2-216ENST00000534765 UQCRHLA0A096LP55 91 aa11.22□□□□□ -0.61
SF3B2-216ENST00000534765 UQCRHP07919 91 aa11.22□□□□□ -0.61
SF3B2-216ENST00000534765 PRDM4Q9UKN5 801 aa11.22□□□□□ -0.61
SF3B2-216ENST00000534765 RTL1A6NKG5 1358 aa11.22□□□□□ -0.61
SF3B2-216ENST00000534765 PTMAP06454 111 aaKnown RBP11.22□□□□□ -0.61
SF3B2-216ENST00000534765 GTF2E1P29083 439 aaPredicted RBP11.22□□□□□ -0.61
SF3B2-216ENST00000534765 DZIP1LQ8IYY4 767 aaKnown RBP11.22□□□□□ -0.61
SF3B2-216ENST00000534765 SHANK3Q9BYB0 1731 aa11.22□□□□□ -0.61
SF3B2-216ENST00000534765 ZNF771Q7L3S4 317 aaPredicted RBP11.22□□□□□ -0.61
SF3B2-216ENST00000534765 MRE11P49959 708 aa11.21□□□□□ -0.61
SF3B2-216ENST00000534765 GNAI1P63096 354 aa11.21□□□□□ -0.61
SF3B2-216ENST00000534765 ZKSCAN2Q63HK3 967 aa11.21□□□□□ -0.61
SF3B2-216ENST00000534765 ZNF428Q96B54 188 aa11.21□□□□□ -0.61
SF3B2-216ENST00000534765 NHSL1Q5SYE7 1610 aa11.21□□□□□ -0.61
SF3B2-216ENST00000534765 CEMIPQ8WUJ3 1361 aa11.21□□□□□ -0.62
SF3B2-216ENST00000534765 F6X3S4 739 aa11.21□□□□□ -0.62
SF3B2-216ENST00000534765 GRPEL1Q9HAV7 217 aa11.2□□□□□ -0.62
SF3B2-216ENST00000534765 C5P01031 1676 aa11.2□□□□□ -0.62
SF3B2-216ENST00000534765 SEC24BO95487 1268 aa11.2□□□□□ -0.62
SF3B2-216ENST00000534765 ANXA1P04083 346 aa11.2□□□□□ -0.62
SF3B2-216ENST00000534765 CADPS2Q86UW7 1296 aa11.2□□□□□ -0.62
SF3B2-216ENST00000534765 ITPRIPQ8IWB1 547 aa11.2□□□□□ -0.62
SF3B2-216ENST00000534765 ZBTB40Q9NUA8 1239 aa11.2□□□□□ -0.62
SF3B2-216ENST00000534765 MAP3K5Q99683 1374 aa11.2□□□□□ -0.62
SF3B2-216ENST00000534765 TRAK2O60296 914 aa11.2□□□□□ -0.62
SF3B2-216ENST00000534765 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.2□□□□□ -0.62
SF3B2-216ENST00000534765 KIF24Q5T7B8 1368 aa11.2□□□□□ -0.62
SF3B2-216ENST00000534765 LTBP4Q8N2S1 1624 aa11.19□□□□□ -0.62
SF3B2-216ENST00000534765 ZBTB7BO15156 539 aaPredicted RBP11.19□□□□□ -0.62
SF3B2-216ENST00000534765 MAP7D2Q96T17 732 aa11.19□□□□□ -0.62
SF3B2-216ENST00000534765 ADAMTS7Q9UKP4 1686 aa11.19□□□□□ -0.62
SF3B2-216ENST00000534765 KDM6AO15550 1401 aaPredicted RBP11.19□□□□□ -0.62
SF3B2-216ENST00000534765 ROBO1Q9Y6N7 1651 aa11.19□□□□□ -0.62
SF3B2-216ENST00000534765 GNAT3A8MTJ3 354 aa11.19□□□□□ -0.62
SF3B2-216ENST00000534765 SOS2Q07890 1332 aaPredicted RBP11.19□□□□□ -0.62
SF3B2-216ENST00000534765 CERS3Q8IU89 383 aa11.19□□□□□ -0.62
SF3B2-216ENST00000534765 FOXD4L1Q9NU39 408 aa11.19□□□□□ -0.62
SF3B2-216ENST00000534765 KCNH5Q8NCM2 988 aa11.18□□□□□ -0.62
SF3B2-216ENST00000534765 TSPYL4Q9UJ04 414 aa11.18□□□□□ -0.62
SF3B2-216ENST00000534765 ABCC4O15439 1325 aa11.18□□□□□ -0.62
SF3B2-216ENST00000534765 GLI3P10071 1580 aa11.18□□□□□ -0.62
SF3B2-216ENST00000534765 NCOA3Q9Y6Q9 1424 aa11.18□□□□□ -0.62
SF3B2-216ENST00000534765 C8orf34Q49A92 452 aa11.18□□□□□ -0.62
SF3B2-216ENST00000534765 PPP4R3BQ5MIZ7 849 aa11.18□□□□□ -0.62
SF3B2-216ENST00000534765 PHAXQ9H814 394 aaKnown RBP11.18□□□□□ -0.62
SF3B2-216ENST00000534765 ALDH1L2Q3SY69 923 aa11.17□□□□□ -0.62
SF3B2-216ENST00000534765 TPRNQ4KMQ1 711 aa11.17□□□□□ -0.62
SF3B2-216ENST00000534765 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.17□□□□□ -0.62
SF3B2-216ENST00000534765 SCN11AQ9UI33 1791 aa11.17□□□□□ -0.62
SF3B2-216ENST00000534765 NPHP3Q7Z494 1330 aa11.17□□□□□ -0.62
SF3B2-216ENST00000534765 BRPF1P55201 1214 aaPredicted RBP11.16□□□□□ -0.62
SF3B2-216ENST00000534765 PROSER3Q2NL68 480 aa11.16□□□□□ -0.62
SF3B2-216ENST00000534765 CYP27B1O15528 508 aa11.16□□□□□ -0.62
SF3B2-216ENST00000534765 CENPQQ7L2Z9 268 aaPredicted RBP11.16□□□□□ -0.62
SF3B2-216ENST00000534765 IPO4Q8TEX9 1081 aaKnown RBP11.16□□□□□ -0.62
SF3B2-216ENST00000534765 COL16A1Q07092 1604 aaPredicted RBP11.16□□□□□ -0.62
SF3B2-216ENST00000534765 SLC4A2P04920 1241 aa11.16□□□□□ -0.62
SF3B2-216ENST00000534765 SLC39A6Q13433 755 aa11.16□□□□□ -0.62
SF3B2-216ENST00000534765 FTSJ3Q8IY81 847 aaKnown RBP11.16□□□□□ -0.62
SF3B2-216ENST00000534765 ZBTB22O15209 634 aa11.16□□□□□ -0.62
SF3B2-216ENST00000534765 PIP4K2AP48426 406 aaPredicted RBP11.15□□□□□ -0.62
SF3B2-216ENST00000534765 ZNF530Q6P9A1 599 aaPredicted RBP11.15□□□□□ -0.62
SF3B2-216ENST00000534765 TOGARAM1Q9Y4F4 1720 aa11.15□□□□□ -0.62
SF3B2-216ENST00000534765 CT47B1P0C2W7 299 aaPredicted RBP11.15□□□□□ -0.62
SF3B2-216ENST00000534765 PDZRN3Q9UPQ7 1066 aa11.15□□□□□ -0.62
SF3B2-216ENST00000534765 PKD1L3Q7Z443 1732 aa11.15□□□□□ -0.62
SF3B2-216ENST00000534765 ERBB4Q15303 1308 aa11.15□□□□□ -0.63
SF3B2-216ENST00000534765 MPNDQ8N594 471 aa11.15□□□□□ -0.63
SF3B2-216ENST00000534765 TRERF1Q96PN7 1200 aa11.15□□□□□ -0.63
SF3B2-216ENST00000534765 GAS2L2Q8NHY3 880 aa11.14□□□□□ -0.63
SF3B2-216ENST00000534765 NLRP2Q9NX02 1062 aa11.14□□□□□ -0.63
SF3B2-216ENST00000534765 COL5A2P05997 1499 aaPredicted RBP11.14□□□□□ -0.63
SF3B2-216ENST00000534765 ATP10DQ9P241 1426 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms