RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, humanhuman

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-238ENST00000534647 ERICH6Q7L0X2 663 aa15.97■□□□□ 0.15
CTNND1-238ENST00000534647 CLSPNQ9HAW4 1339 aa15.96■□□□□ 0.15
CTNND1-238ENST00000534647 GIGYF1O75420 1035 aaPredicted RBP15.96■□□□□ 0.15
CTNND1-238ENST00000534647 AK7Q96M32 723 aa15.96■□□□□ 0.15
CTNND1-238ENST00000534647 ANKRD26Q9UPS8 1709 aa15.95■□□□□ 0.14
CTNND1-238ENST00000534647 SENP3-EIF4A1A0A087X0R7 540 aa15.95■□□□□ 0.14
CTNND1-238ENST00000534647 LOC102724428A0A0B4J2F2 783 aa15.95■□□□□ 0.14
CTNND1-238ENST00000534647 PPM1GO15355 546 aaPredicted RBP15.95■□□□□ 0.14
CTNND1-238ENST00000534647 SSFA2P28290 1259 aa15.95■□□□□ 0.14
CTNND1-238ENST00000534647 SIK1P57059 783 aa15.95■□□□□ 0.14
CTNND1-238ENST00000534647 IFNL2Q8IZJ0 200 aa15.95■□□□□ 0.14
CTNND1-238ENST00000534647 TAF1LQ8IZX4 1826 aa15.95■□□□□ 0.14
CTNND1-238ENST00000534647 C4BP0C0L5 1744 aa15.94■□□□□ 0.14
CTNND1-238ENST00000534647 TOGARAM1Q9Y4F4 1720 aa15.94■□□□□ 0.14
CTNND1-238ENST00000534647 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.94■□□□□ 0.14
CTNND1-238ENST00000534647 PHKG2P15735 406 aa15.94■□□□□ 0.14
CTNND1-238ENST00000534647 SAMD1Q6SPF0 538 aaPredicted RBP15.94■□□□□ 0.14
CTNND1-238ENST00000534647 AMIGO3Q86WK7 504 aa15.94■□□□□ 0.14
CTNND1-238ENST00000534647 CFAP44Q96MT7 982 aa15.94■□□□□ 0.14
CTNND1-238ENST00000534647 TMOD3Q9NYL9 352 aa15.93■□□□□ 0.14
CTNND1-238ENST00000534647 ITGB4P16144 1822 aa15.93■□□□□ 0.14
CTNND1-238ENST00000534647 LINC00116Q8NCU8 138 aa15.92■□□□□ 0.14
CTNND1-238ENST00000534647 ASAP1Q9ULH1 1129 aa15.92■□□□□ 0.14
CTNND1-238ENST00000534647 MAP2P11137 1827 aaKnown RBP15.91■□□□□ 0.14
CTNND1-238ENST00000534647 EIF4A2Q14240 407 aaKnown RBP15.91■□□□□ 0.14
CTNND1-238ENST00000534647 ERVV-2B6SEH9 535 aa15.9■□□□□ 0.14
CTNND1-238ENST00000534647 ITPK1Q13572 414 aa15.9■□□□□ 0.14
CTNND1-238ENST00000534647 ATG3Q9NT62 314 aa15.9■□□□□ 0.14
CTNND1-238ENST00000534647 UBR3Q6ZT12 1888 aa15.89■□□□□ 0.13
CTNND1-238ENST00000534647 PHF14O94880 888 aa15.89■□□□□ 0.13
CTNND1-238ENST00000534647 ATP6V1AP38606 617 aa15.89■□□□□ 0.13
CTNND1-238ENST00000534647 IGSF1Q8N6C5 1336 aa15.89■□□□□ 0.13
CTNND1-238ENST00000534647 GOLGB1Q14789 3259 aaKnown RBP15.88■□□□□ 0.13
CTNND1-238ENST00000534647 HSP90AB1P08238 724 aaKnown RBP15.88■□□□□ 0.13
CTNND1-238ENST00000534647 RC3H1Q5TC82 1133 aaKnown RBP15.88■□□□□ 0.13
CTNND1-238ENST00000534647 SMIM5Q71RC9 77 aa15.88■□□□□ 0.13
CTNND1-238ENST00000534647 DCAF5Q96JK2 942 aa15.88■□□□□ 0.13
CTNND1-238ENST00000534647 ADCY9O60503 1353 aa15.87■□□□□ 0.13
CTNND1-238ENST00000534647 ATP10DQ9P241 1426 aa15.87■□□□□ 0.13
CTNND1-238ENST00000534647 GNPATO15228 680 aa15.87■□□□□ 0.13
CTNND1-238ENST00000534647 AMOTQ4VCS5 1084 aa15.86■□□□□ 0.13
CTNND1-238ENST00000534647 KDRP35968 1356 aa15.86■□□□□ 0.13
CTNND1-238ENST00000534647 EIF4G2P78344 907 aaKnown RBP eCLIP15.85■□□□□ 0.13
CTNND1-238ENST00000534647 PLEKHO1Q53GL0 409 aaPredicted RBP15.85■□□□□ 0.13
CTNND1-238ENST00000534647 TRAPPC3LQ5T215 181 aa15.85■□□□□ 0.13
CTNND1-238ENST00000534647 NLGN1Q8N2Q7 840 aa15.85■□□□□ 0.13
CTNND1-238ENST00000534647 SLC4A9Q96Q91 983 aa15.85■□□□□ 0.13
CTNND1-238ENST00000534647 GPBP1L1Q9HC44 474 aaPredicted RBP15.85■□□□□ 0.13
CTNND1-238ENST00000534647 ZNF831Q5JPB2 1677 aa15.85■□□□□ 0.13
CTNND1-238ENST00000534647 TNNT2P45379 298 aaPredicted RBP15.84■□□□□ 0.13
CTNND1-238ENST00000534647 TGFB2P61812 414 aa15.84■□□□□ 0.13
CTNND1-238ENST00000534647 PANK3Q9H999 370 aa15.84■□□□□ 0.13
CTNND1-238ENST00000534647 RTCBQ9Y3I0 505 aaKnown RBP15.84■□□□□ 0.13
CTNND1-238ENST00000534647 MMP10P09238 476 aa15.83■□□□□ 0.12
CTNND1-238ENST00000534647 CNTNAP4Q9C0A0 1308 aa15.83■□□□□ 0.12
CTNND1-238ENST00000534647 RPS6KA4O75676 772 aa15.82■□□□□ 0.12
CTNND1-238ENST00000534647 HSPA5P11021 654 aaKnown RBP15.81■□□□□ 0.12
CTNND1-238ENST00000534647 ARHGEF1Q92888 912 aaKnown RBP15.81■□□□□ 0.12
CTNND1-238ENST00000534647 TSHZ2Q9NRE2 1034 aa15.81■□□□□ 0.12
CTNND1-238ENST00000534647 CABP4P57796 275 aa15.8■□□□□ 0.12
CTNND1-238ENST00000534647 ZNF530Q6P9A1 599 aaPredicted RBP15.8■□□□□ 0.12
CTNND1-238ENST00000534647 POLR3GLQ9BT43 218 aa15.8■□□□□ 0.12
CTNND1-238ENST00000534647 RBM42Q9BTD8 480 aaKnown RBP15.8■□□□□ 0.12
CTNND1-238ENST00000534647 KDM6AO15550 1401 aaPredicted RBP15.79■□□□□ 0.12
CTNND1-238ENST00000534647 GYS1P13807 737 aa15.79■□□□□ 0.12
CTNND1-238ENST00000534647 MTHFSP49914 203 aa15.79■□□□□ 0.12
CTNND1-238ENST00000534647 ZNF219Q9P2Y4 722 aaPredicted RBP15.79■□□□□ 0.12
CTNND1-238ENST00000534647 PXDNLA1KZ92 1463 aa15.78■□□□□ 0.12
CTNND1-238ENST00000534647 RFC4P35249 363 aa15.78■□□□□ 0.12
CTNND1-238ENST00000534647 ZEB1P37275 1124 aaPredicted RBP15.78■□□□□ 0.12
CTNND1-238ENST00000534647 NBR1Q14596 966 aa15.78■□□□□ 0.12
CTNND1-238ENST00000534647 MORC1Q86VD1 984 aa15.78■□□□□ 0.12
CTNND1-238ENST00000534647 SPRYD3Q8NCJ5 442 aa15.78■□□□□ 0.12
CTNND1-238ENST00000534647 CICQ96RK0 1608 aaPredicted RBP15.78■□□□□ 0.12
CTNND1-238ENST00000534647 KIF13BQ9NQT8 1826 aa15.78■□□□□ 0.12
CTNND1-238ENST00000534647 C10orf71Q711Q0 1435 aa15.77■□□□□ 0.12
CTNND1-238ENST00000534647 HSPA6P17066 643 aa15.77■□□□□ 0.12
CTNND1-238ENST00000534647 C1orf141Q5JVX7 400 aa15.77■□□□□ 0.12
CTNND1-238ENST00000534647 HOMEZQ8IX15 550 aa15.77■□□□□ 0.12
CTNND1-238ENST00000534647 NFATC2IPQ8NCF5 419 aa15.77■□□□□ 0.12
CTNND1-238ENST00000534647 IL13P35225 146 aa15.76■□□□□ 0.11
CTNND1-238ENST00000534647 AEBP1Q8IUX7 1158 aa15.76■□□□□ 0.11
CTNND1-238ENST00000534647 CCDC87Q9NVE4 849 aa15.76■□□□□ 0.11
CTNND1-238ENST00000534647 A0A0G2JLW4 131 aa15.75■□□□□ 0.11
CTNND1-238ENST00000534647 KIF3CO14782 793 aa15.75■□□□□ 0.11
CTNND1-238ENST00000534647 WWC3Q9ULE0 1092 aa15.75■□□□□ 0.11
CTNND1-238ENST00000534647 KNSTRNQ9Y448 316 aa15.75■□□□□ 0.11
CTNND1-238ENST00000534647 PARP3Q9Y6F1 533 aa15.75■□□□□ 0.11
CTNND1-238ENST00000534647 COL5A3P25940 1745 aaPredicted RBP15.74■□□□□ 0.11
CTNND1-238ENST00000534647 KCNA3P22001 575 aa15.74■□□□□ 0.11
CTNND1-238ENST00000534647 CRKLP46109 303 aaKnown RBP15.74■□□□□ 0.11
CTNND1-238ENST00000534647 SULT6B1Q6IMI4 303 aa15.74■□□□□ 0.11
CTNND1-238ENST00000534647 CCER1Q8TC90 406 aaPredicted RBP15.74■□□□□ 0.11
CTNND1-238ENST00000534647 ZNF526Q8TF50 670 aaPredicted RBP15.74■□□□□ 0.11
CTNND1-238ENST00000534647 KIAA1551Q9HCM1 1747 aa15.74■□□□□ 0.11
CTNND1-238ENST00000534647 PTCD1O75127 700 aaKnown RBP15.73■□□□□ 0.11
CTNND1-238ENST00000534647 ECM2O94769 699 aaPredicted RBP15.73■□□□□ 0.11
CTNND1-238ENST00000534647 DPEP1P16444 411 aa15.73■□□□□ 0.11
CTNND1-238ENST00000534647 BCS1LQ9Y276 419 aa15.73■□□□□ 0.11
CTNND1-238ENST00000534647 CEP350Q5VT06 3117 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms