RNA–Protein interactions for RNA: ENST00000534412.5

PICALM-223, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 5

Gene PICALM, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-223	ENST00000534412	EEA1	Q15075	1411 aa		10.19	□□□□□ -0.78
PICALM-223	ENST00000534412	SCAPER	Q9BY12	1400 aa		10.19	□□□□□ -0.78
PICALM-223	ENST00000534412	LINC00528	Q8N1L1	170 aa		10.19	□□□□□ -0.78
PICALM-223	ENST00000534412	TSEN34	Q9BSV6	310 aa	Known RBP	10.19	□□□□□ -0.78
PICALM-223	ENST00000534412	APBB1	O00213	710 aa		10.18	□□□□□ -0.78
PICALM-223	ENST00000534412	MAN1A2	O60476	641 aa		10.18	□□□□□ -0.78
PICALM-223	ENST00000534412	BANK1	Q8NDB2	785 aa		10.18	□□□□□ -0.78
PICALM-223	ENST00000534412	OCSTAMP	Q9BR26	566 aa		10.18	□□□□□ -0.78
PICALM-223	ENST00000534412	TRIM34	Q9BYJ4	488 aa		10.18	□□□□□ -0.78
PICALM-223	ENST00000534412	TRIM52	Q96A61	297 aa		10.17	□□□□□ -0.78
PICALM-223	ENST00000534412	CDK13	Q14004	1512 aa	Known RBP	10.17	□□□□□ -0.78
PICALM-223	ENST00000534412	SOCS7	O14512	581 aa		10.16	□□□□□ -0.78
PICALM-223	ENST00000534412	RAB15	P59190	212 aa		10.16	□□□□□ -0.78
PICALM-223	ENST00000534412	MLEC	Q14165	292 aa		10.16	□□□□□ -0.78
PICALM-223	ENST00000534412	INTS6L	Q5JSJ4	861 aa	Known RBP	10.16	□□□□□ -0.78
PICALM-223	ENST00000534412	NPAS3	Q8IXF0	933 aa		10.16	□□□□□ -0.78
PICALM-223	ENST00000534412	KDM5C	P41229	1560 aa		10.16	□□□□□ -0.78
PICALM-223	ENST00000534412	ZNF518A	Q6AHZ1	1483 aa		10.16	□□□□□ -0.78
PICALM-223	ENST00000534412	DISP3	Q9P2K9	1392 aa		10.15	□□□□□ -0.78
PICALM-223	ENST00000534412	RERE	Q9P2R6	1566 aa		10.15	□□□□□ -0.78
PICALM-223	ENST00000534412	ZBBX	A8MT70	800 aa		10.15	□□□□□ -0.78
PICALM-223	ENST00000534412	LCE2A	Q5TA79	106 aa	Predicted RBP	10.15	□□□□□ -0.78
PICALM-223	ENST00000534412	ILDR2	Q71H61	639 aa		10.15	□□□□□ -0.78
PICALM-223	ENST00000534412	UHRF1BP1	Q6BDS2	1440 aa		10.15	□□□□□ -0.79
PICALM-223	ENST00000534412	STRC	Q7RTU9	1775 aa		10.14	□□□□□ -0.79
PICALM-223	ENST00000534412	GJD4	Q96KN9	370 aa	Predicted RBP	10.14	□□□□□ -0.79
PICALM-223	ENST00000534412	PTPRT	O14522	1441 aa		10.14	□□□□□ -0.79
PICALM-223	ENST00000534412	ZNF592	Q92610	1267 aa		10.13	□□□□□ -0.79
PICALM-223	ENST00000534412	PCDHB9	Q9Y5E1	797 aa		10.13	□□□□□ -0.79
PICALM-223	ENST00000534412	IQSEC2	Q5JU85	1478 aa		10.12	□□□□□ -0.79
PICALM-223	ENST00000534412	SOBP	A7XYQ1	873 aa		10.12	□□□□□ -0.79
PICALM-223	ENST00000534412	CEBPA	P49715	358 aa	Predicted RBP	10.12	□□□□□ -0.79
PICALM-223	ENST00000534412	CBLB	Q13191	982 aa		10.12	□□□□□ -0.79
PICALM-223	ENST00000534412	EFCAB2	Q5VUJ9	269 aa		10.12	□□□□□ -0.79
PICALM-223	ENST00000534412		Q6ZVU0	165 aa		10.12	□□□□□ -0.79
PICALM-223	ENST00000534412	ZNF330	Q9Y3S2	320 aa	Predicted RBP	10.12	□□□□□ -0.79
PICALM-223	ENST00000534412	SPATA31D1	Q6ZQQ2	1576 aa		10.12	□□□□□ -0.79
PICALM-223	ENST00000534412	DIP2C	Q9Y2E4	1556 aa		10.12	□□□□□ -0.79
PICALM-223	ENST00000534412	MYO5C	Q9NQX4	1742 aa		10.11	□□□□□ -0.79
PICALM-223	ENST00000534412	RANGAP1	P46060	587 aa	Predicted RBP	10.11	□□□□□ -0.79
PICALM-223	ENST00000534412	SEPT12	Q8IYM1	358 aa		10.11	□□□□□ -0.79
PICALM-223	ENST00000534412	IRF7	Q92985	503 aa		10.11	□□□□□ -0.79
PICALM-223	ENST00000534412	NDUFB9	Q9Y6M9	179 aa		10.11	□□□□□ -0.79
PICALM-223	ENST00000534412	AGL	P35573	1532 aa		10.11	□□□□□ -0.79
PICALM-223	ENST00000534412	LTBP4	Q8N2S1	1624 aa		10.11	□□□□□ -0.79
PICALM-223	ENST00000534412	MLH3	Q9UHC1	1453 aa		10.1	□□□□□ -0.79
PICALM-223	ENST00000534412	FMN1	Q68DA7	1419 aa		10.1	□□□□□ -0.79
PICALM-223	ENST00000534412	VEGFB	P49765	207 aa		10.1	□□□□□ -0.79
PICALM-223	ENST00000534412	PRM3	Q9NNZ6	103 aa		10.1	□□□□□ -0.79
PICALM-223	ENST00000534412	KIF14	Q15058	1648 aa		10.1	□□□□□ -0.79
PICALM-223	ENST00000534412	SOS2	Q07890	1332 aa	Predicted RBP	10.09	□□□□□ -0.79
PICALM-223	ENST00000534412	TRO	Q12816	1431 aa	Predicted RBP	10.09	□□□□□ -0.79
PICALM-223	ENST00000534412	TTLL8	A6PVC2	850 aa		10.09	□□□□□ -0.79
PICALM-223	ENST00000534412	FBXO45	P0C2W1	286 aa		10.09	□□□□□ -0.79
PICALM-223	ENST00000534412	MCCD1	P59942	119 aa	Predicted RBP	10.09	□□□□□ -0.79
PICALM-223	ENST00000534412	INSM1	Q01101	510 aa	Predicted RBP	10.09	□□□□□ -0.79
PICALM-223	ENST00000534412	NCOA1	Q15788	1441 aa		10.08	□□□□□ -0.8
PICALM-223	ENST00000534412	ARHGAP5	Q13017	1502 aa		10.08	□□□□□ -0.8
PICALM-223	ENST00000534412	ABCA6	Q8N139	1617 aa		10.08	□□□□□ -0.8
PICALM-223	ENST00000534412		H3BM21	787 aa		10.08	□□□□□ -0.8
PICALM-223	ENST00000534412	ERVH48-1	M5A8F1	160 aa		10.08	□□□□□ -0.8
PICALM-223	ENST00000534412	WIPF1	O43516	503 aa		10.08	□□□□□ -0.8
PICALM-223	ENST00000534412	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	10.08	□□□□□ -0.8	2e-7	■■■■□ 22.1
PICALM-223	ENST00000534412	AFAP1	Q8N556	730 aa		10.08	□□□□□ -0.8
PICALM-223	ENST00000534412	MTMR14	Q8NCE2	650 aa		10.08	□□□□□ -0.8
PICALM-223	ENST00000534412	TMPRSS4	Q9NRS4	437 aa		10.08	□□□□□ -0.8
PICALM-223	ENST00000534412	TRAPPC8	Q9Y2L5	1435 aa		10.07	□□□□□ -0.8
PICALM-223	ENST00000534412	C3	P01024	1663 aa		10.07	□□□□□ -0.8
PICALM-223	ENST00000534412	ESPN	B1AK53	854 aa		10.07	□□□□□ -0.8
PICALM-223	ENST00000534412	PRKCSH	P14314	528 aa	Predicted RBP	10.07	□□□□□ -0.8
PICALM-223	ENST00000534412	RELB	Q01201	579 aa		10.07	□□□□□ -0.8
PICALM-223	ENST00000534412	NR1H3	Q13133	447 aa		10.07	□□□□□ -0.8
PICALM-223	ENST00000534412	CCDC125	Q86Z20	511 aa		10.07	□□□□□ -0.8
PICALM-223	ENST00000534412	ZNF784	Q8NCA9	323 aa	Predicted RBP	10.07	□□□□□ -0.8
PICALM-223	ENST00000534412	SNRK	Q9NRH2	765 aa		10.07	□□□□□ -0.8
PICALM-223	ENST00000534412	CDK11A	Q9UQ88	783 aa	Predicted RBP	10.07	□□□□□ -0.8
PICALM-223	ENST00000534412	CNTLN	Q9NXG0	1405 aa		10.07	□□□□□ -0.8
PICALM-223	ENST00000534412	ARHGAP35	Q9NRY4	1499 aa		10.06	□□□□□ -0.8
PICALM-223	ENST00000534412	SPINT1	O43278	529 aa		10.06	□□□□□ -0.8
PICALM-223	ENST00000534412	RNF20	Q5VTR2	975 aa		10.06	□□□□□ -0.8
PICALM-223	ENST00000534412	AGBL1	Q96MI9	1066 aa		10.06	□□□□□ -0.8
PICALM-223	ENST00000534412	DNMT3L	Q9UJW3	386 aa		10.06	□□□□□ -0.8
PICALM-223	ENST00000534412	ABCC1	P33527	1531 aa		10.06	□□□□□ -0.8
PICALM-223	ENST00000534412	CLIP1	P30622	1438 aa		10.06	□□□□□ -0.8
PICALM-223	ENST00000534412	SETD1B	Q9UPS6	1966 aa	Known RBP	10.05	□□□□□ -0.8
PICALM-223	ENST00000534412	NPAT	Q14207	1427 aa		10.05	□□□□□ -0.8
PICALM-223	ENST00000534412	FIGNL2	A6NMB9	653 aa		10.04	□□□□□ -0.8
PICALM-223	ENST00000534412	GIGYF1	O75420	1035 aa	Predicted RBP	10.04	□□□□□ -0.8
PICALM-223	ENST00000534412	ADH1A	P07327	375 aa		10.04	□□□□□ -0.8
PICALM-223	ENST00000534412	POLM	Q9NP87	494 aa	Predicted RBP	10.04	□□□□□ -0.8
PICALM-223	ENST00000534412	PREX2	Q70Z35	1606 aa		10.04	□□□□□ -0.8
PICALM-223	ENST00000534412	CYLD	Q9NQC7	956 aa		10.03	□□□□□ -0.8
PICALM-223	ENST00000534412	INSM2	Q96T92	566 aa	Predicted RBP	10.02	□□□□□ -0.81
PICALM-223	ENST00000534412	ESF1	Q9H501	851 aa	Known RBP	10.02	□□□□□ -0.81
PICALM-223	ENST00000534412	ZNF395	Q9H8N7	513 aa	Predicted RBP	10.02	□□□□□ -0.81
PICALM-223	ENST00000534412	CDC42BPB	Q9Y5S2	1711 aa		10.02	□□□□□ -0.81
PICALM-223	ENST00000534412	CAMSAP1	Q5T5Y3	1602 aa		10.01	□□□□□ -0.81
PICALM-223	ENST00000534412	LILRA1	O75019	489 aa		10.01	□□□□□ -0.81
PICALM-223	ENST00000534412	PPFIA3	O75145	1194 aa		10.01	□□□□□ -0.81
PICALM-223	ENST00000534412	GMPR	P36959	345 aa		10.01	□□□□□ -0.81

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