RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 CABP4P57796 275 aa28.56■■■□□ 2.16
PKP3-211ENST00000534401 GAS2L2Q8NHY3 880 aa28.56■■■□□ 2.16
PKP3-211ENST00000534401 PDGFDQ9GZP0 370 aaPredicted RBP28.56■■■□□ 2.16
PKP3-211ENST00000534401 PRKRIP1Q9H875 184 aaPredicted RBP28.56■■■□□ 2.16
PKP3-211ENST00000534401 TUBGCP6Q96RT7 1819 aa28.55■■■□□ 2.16
PKP3-211ENST00000534401 LOC102724428A0A0B4J2F2 783 aa28.54■■■□□ 2.16
PKP3-211ENST00000534401 SIK1P57059 783 aa28.54■■■□□ 2.16
PKP3-211ENST00000534401 NFATC2IPQ8NCF5 419 aa28.54■■■□□ 2.16
PKP3-211ENST00000534401 SLC52A2Q9HAB3 445 aa28.53■■■□□ 2.16
PKP3-211ENST00000534401 MAP3K5Q99683 1374 aa28.51■■■□□ 2.16
PKP3-211ENST00000534401 SLC4A9Q96Q91 983 aa28.51■■■□□ 2.15
PKP3-211ENST00000534401 GNAT3A8MTJ3 354 aa28.5■■■□□ 2.15
PKP3-211ENST00000534401 IL17REQ8NFR9 667 aa28.5■■■□□ 2.15
PKP3-211ENST00000534401 C4BP0C0L5 1744 aa28.49■■■□□ 2.15
PKP3-211ENST00000534401 PNPLA7Q6ZV29 1317 aa28.49■■■□□ 2.15
PKP3-211ENST00000534401 PLEKHF1Q96S99 279 aa28.49■■■□□ 2.15
PKP3-211ENST00000534401 CEMIPQ8WUJ3 1361 aa28.49■■■□□ 2.15
PKP3-211ENST00000534401 CICQ96RK0 1608 aaPredicted RBP28.48■■■□□ 2.15
PKP3-211ENST00000534401 ITPK1Q13572 414 aa28.48■■■□□ 2.15
PKP3-211ENST00000534401 SPON1Q9HCB6 807 aa28.48■■■□□ 2.15
PKP3-211ENST00000534401 SIPA1L3O60292 1781 aaPredicted RBP28.47■■■□□ 2.15
PKP3-211ENST00000534401 COL24A1Q17RW2 1714 aa28.47■■■□□ 2.15
PKP3-211ENST00000534401 UBR3Q6ZT12 1888 aa28.45■■■□□ 2.15
PKP3-211ENST00000534401 LINC00116Q8NCU8 138 aa28.45■■■□□ 2.14
PKP3-211ENST00000534401 SLC16A10Q8TF71 515 aa28.45■■■□□ 2.14
PKP3-211ENST00000534401 TFCP2L1Q9NZI6 479 aa28.45■■■□□ 2.14
PKP3-211ENST00000534401 ATP6V1AP38606 617 aa28.44■■■□□ 2.14
PKP3-211ENST00000534401 COL5A3P25940 1745 aaPredicted RBP28.43■■■□□ 2.14
PKP3-211ENST00000534401 HTATSF1O43719 755 aaKnown RBP28.43■■■□□ 2.14
PKP3-211ENST00000534401 SGIP1Q9BQI5 828 aa28.43■■■□□ 2.14
PKP3-211ENST00000534401 MTFR1LQ9H019 292 aa28.43■■■□□ 2.14
PKP3-211ENST00000534401 PTGER2P43116 358 aa28.42■■■□□ 2.14
PKP3-211ENST00000534401 UBR2Q8IWV8 1755 aa28.41■■■□□ 2.14
PKP3-211ENST00000534401 DLG5Q8TDM6 1919 aa28.4■■■□□ 2.14
PKP3-211ENST00000534401 ZBTB7AO95365 584 aa28.4■■■□□ 2.14
PKP3-211ENST00000534401 RC3H1Q5TC82 1133 aaKnown RBP28.4■■■□□ 2.14
PKP3-211ENST00000534401 PNNQ9H307 717 aaKnown RBP28.4■■■□□ 2.14
PKP3-211ENST00000534401 KCPQ6ZWJ8 1503 aa28.39■■■□□ 2.14
PKP3-211ENST00000534401 MYH14Q7Z406 1995 aaKnown RBP28.39■■■□□ 2.14
PKP3-211ENST00000534401 AMIGO3Q86WK7 504 aa28.39■■■□□ 2.14
PKP3-211ENST00000534401 COL23A1Q86Y22 540 aaPredicted RBP28.39■■■□□ 2.14
PKP3-211ENST00000534401 FLAD1Q8NFF5 587 aa28.39■■■□□ 2.14
PKP3-211ENST00000534401 RBM42Q9BTD8 480 aaKnown RBP28.39■■■□□ 2.14
PKP3-211ENST00000534401 TJP1Q07157 1748 aa28.38■■■□□ 2.13
PKP3-211ENST00000534401 PTCD1O75127 700 aaKnown RBP28.37■■■□□ 2.13
PKP3-211ENST00000534401 SLC39A6Q13433 755 aa28.36■■■□□ 2.13
PKP3-211ENST00000534401 ATF5Q9Y2D1 282 aaPredicted RBP28.36■■■□□ 2.13
PKP3-211ENST00000534401 CNTNAP4Q9C0A0 1308 aa28.36■■■□□ 2.13
PKP3-211ENST00000534401 SSFA2P28290 1259 aa28.35■■■□□ 2.13
PKP3-211ENST00000534401 TEFQ10587 303 aa28.35■■■□□ 2.13
PKP3-211ENST00000534401 AK7Q96M32 723 aa28.35■■■□□ 2.13
PKP3-211ENST00000534401 NFE2L2Q16236 605 aa28.34■■■□□ 2.13
PKP3-211ENST00000534401 VSIG10Q8N0Z9 540 aa28.34■■■□□ 2.13
PKP3-211ENST00000534401 NEFMP07197 916 aa28.32■■■□□ 2.12
PKP3-211ENST00000534401 ZNF790Q6PG37 636 aa28.31■■■□□ 2.12
PKP3-211ENST00000534401 RTF1Q92541 710 aaKnown RBP28.31■■■□□ 2.12
PKP3-211ENST00000534401 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.3■■■□□ 2.12
PKP3-211ENST00000534401 MCM10Q7L590 875 aa28.3■■■□□ 2.12
PKP3-211ENST00000534401 RPS6KA4O75676 772 aa28.29■■■□□ 2.12
PKP3-211ENST00000534401 ADAMTS8Q9UP79 889 aa28.29■■■□□ 2.12
PKP3-211ENST00000534401 GNPATO15228 680 aa28.28■■■□□ 2.12
PKP3-211ENST00000534401 DCTN1Q14203 1278 aa28.28■■■□□ 2.12
PKP3-211ENST00000534401 MAPK8IP3Q9UPT6 1336 aa28.27■■■□□ 2.12
PKP3-211ENST00000534401 CRKLP46109 303 aaKnown RBP28.27■■■□□ 2.12
PKP3-211ENST00000534401 SMIM5Q71RC9 77 aa28.27■■■□□ 2.12
PKP3-211ENST00000534401 DNAJC10Q8IXB1 793 aa28.27■■■□□ 2.12
PKP3-211ENST00000534401 ZNF496Q96IT1 587 aaPredicted RBP28.27■■■□□ 2.12
PKP3-211ENST00000534401 CYP19A1P11511 503 aaPredicted RBP28.26■■■□□ 2.11
PKP3-211ENST00000534401 ADRA2BP18089 450 aa28.26■■■□□ 2.11
PKP3-211ENST00000534401 INTS5Q6P9B9 1019 aaKnown RBP28.26■■■□□ 2.11
PKP3-211ENST00000534401 BTBD11A6QL63 1104 aa28.25■■■□□ 2.11
PKP3-211ENST00000534401 WDR43Q15061 677 aaKnown RBP eCLIP28.25■■■□□ 2.11
PKP3-211ENST00000534401 RTCBQ9Y3I0 505 aaKnown RBP28.25■■■□□ 2.11
PKP3-211ENST00000534401 HEG1Q9ULI3 1381 aa28.24■■■□□ 2.11
PKP3-211ENST00000534401 TMPOP42166 694 aaKnown RBP28.24■■■□□ 2.11
PKP3-211ENST00000534401 TAF7Q15545 349 aaPredicted RBP28.24■■■□□ 2.11
PKP3-211ENST00000534401 TTC5Q8N0Z6 440 aa28.24■■■□□ 2.11
PKP3-211ENST00000534401 RUNDC1Q96C34 613 aa28.24■■■□□ 2.11
PKP3-211ENST00000534401 KCNQ3O43525 872 aa28.23■■■□□ 2.11
PKP3-211ENST00000534401 CCDC184Q52MB2 194 aa28.23■■■□□ 2.11
PKP3-211ENST00000534401 ARXQ96QS3 562 aa28.22■■■□□ 2.11
PKP3-211ENST00000534401 PPP1R1BQ9UD71 204 aaPredicted RBP28.22■■■□□ 2.11
PKP3-211ENST00000534401 MSH5O43196 834 aa28.21■■■□□ 2.11
PKP3-211ENST00000534401 PHF14O94880 888 aa28.21■■■□□ 2.11
PKP3-211ENST00000534401 TRAPPC3LQ5T215 181 aa28.21■■■□□ 2.11
PKP3-211ENST00000534401 ARHGEF1Q92888 912 aaKnown RBP28.21■■■□□ 2.11
PKP3-211ENST00000534401 FMNL2Q96PY5 1086 aa28.21■■■□□ 2.11
PKP3-211ENST00000534401 CCDC87Q9NVE4 849 aa28.21■■■□□ 2.11
PKP3-211ENST00000534401 ANP32CO43423 234 aa28.2■■■□□ 2.1
PKP3-211ENST00000534401 TEX13AQ9BXU3 409 aaPredicted RBP28.2■■■□□ 2.1
PKP3-211ENST00000534401 KDM3BQ7LBC6 1761 aa28.19■■■□□ 2.1
PKP3-211ENST00000534401 C4AP0C0L4 1744 aa28.19■■■□□ 2.1
PKP3-211ENST00000534401 RIPK4P57078 832 aa28.19■■■□□ 2.1
PKP3-211ENST00000534401 POLD1P28340 1107 aa28.18■■■□□ 2.1
PKP3-211ENST00000534401 SOS1Q07889 1333 aaPredicted RBP28.18■■■□□ 2.1
PKP3-211ENST00000534401 CCDC146Q8IYE0 955 aa28.17■■■□□ 2.1
PKP3-211ENST00000534401 PNISRQ8TF01 805 aaKnown RBP28.17■■■□□ 2.1
PKP3-211ENST00000534401 THUMPD2Q9BTF0 503 aaKnown RBP28.16■■■□□ 2.1
PKP3-211ENST00000534401 STARD3NLO95772 234 aa28.15■■■□□ 2.1
PKP3-211ENST00000534401 MSL1Q68DK7 614 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms