RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 SENP3-EIF4A1A0A087X0R7 540 aa8.11□□□□□ -1.11
ATPAF1-211ENST00000534216 SLC35F4A4IF30 521 aa8.11□□□□□ -1.11
ATPAF1-211ENST00000534216 PPFIA3O75145 1194 aa8.11□□□□□ -1.11
ATPAF1-211ENST00000534216 RASA1P20936 1047 aa8.11□□□□□ -1.11
ATPAF1-211ENST00000534216 VEGFBP49765 207 aa8.11□□□□□ -1.11
ATPAF1-211ENST00000534216 POU4F2Q12837 409 aa8.11□□□□□ -1.11
ATPAF1-211ENST00000534216 CCDC102BQ68D86 513 aa8.11□□□□□ -1.11
ATPAF1-211ENST00000534216 NBPF10Q6P3W6 841 aaKnown RBP8.11□□□□□ -1.11
ATPAF1-211ENST00000534216 LARGE2Q8N3Y3 721 aa8.11□□□□□ -1.11
ATPAF1-211ENST00000534216 NBPF15Q8N660 670 aa8.11□□□□□ -1.11
ATPAF1-211ENST00000534216 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.11□□□□□ -1.11
ATPAF1-211ENST00000534216 TPCN2Q8NHX9 752 aa8.11□□□□□ -1.11
ATPAF1-211ENST00000534216 SERTAD1Q9UHV2 236 aa8.11□□□□□ -1.11
ATPAF1-211ENST00000534216 H3BM21 787 aa8.1□□□□□ -1.11
ATPAF1-211ENST00000534216 SMTNP53814 917 aa8.1□□□□□ -1.11
ATPAF1-211ENST00000534216 WDR44Q5JSH3 913 aa8.1□□□□□ -1.11
ATPAF1-211ENST00000534216 TMEM214Q6NUQ4 689 aaKnown RBP8.1□□□□□ -1.11
ATPAF1-211ENST00000534216 TREML4Q6UXN2 200 aa8.1□□□□□ -1.11
ATPAF1-211ENST00000534216 CCDC155Q8N6L0 562 aa8.1□□□□□ -1.11
ATPAF1-211ENST00000534216 CCDC97Q96F63 343 aaPredicted RBP8.1□□□□□ -1.11
ATPAF1-211ENST00000534216 ZNF594Q96JF6 807 aaPredicted RBP8.1□□□□□ -1.11
ATPAF1-211ENST00000534216 VRTNQ9H8Y1 702 aa8.1□□□□□ -1.11
ATPAF1-211ENST00000534216 ZNF358Q9NW07 568 aa8.1□□□□□ -1.11
ATPAF1-211ENST00000534216 TIMELESSQ9UNS1 1208 aa8.1□□□□□ -1.11
ATPAF1-211ENST00000534216 BACH1O14867 736 aa8.09□□□□□ -1.11
ATPAF1-211ENST00000534216 WFS1O76024 890 aa8.09□□□□□ -1.11
ATPAF1-211ENST00000534216 MTFR1Q15390 333 aa8.09□□□□□ -1.11
ATPAF1-211ENST00000534216 TAS1R3Q7RTX0 852 aa8.09□□□□□ -1.11
ATPAF1-211ENST00000534216 PPARGC1BQ86YN6 1023 aaKnown RBP8.09□□□□□ -1.11
ATPAF1-211ENST00000534216 SIX5Q8N196 739 aa8.09□□□□□ -1.11
ATPAF1-211ENST00000534216 C1orf115Q9H7X2 142 aa8.09□□□□□ -1.11
ATPAF1-211ENST00000534216 SERPINA10Q9UK55 444 aa8.09□□□□□ -1.11
ATPAF1-211ENST00000534216 A6NJY4 79 aa8.08□□□□□ -1.12
ATPAF1-211ENST00000534216 DKK1O94907 266 aa8.08□□□□□ -1.12
ATPAF1-211ENST00000534216 RFX1P22670 979 aa8.08□□□□□ -1.12
ATPAF1-211ENST00000534216 GTF2E1P29083 439 aaPredicted RBP8.08□□□□□ -1.12
ATPAF1-211ENST00000534216 CRTC2Q53ET0 693 aaPredicted RBP8.08□□□□□ -1.12
ATPAF1-211ENST00000534216 GNASQ5JWF2 1037 aa8.08□□□□□ -1.12
ATPAF1-211ENST00000534216 LCE2AQ5TA79 106 aaPredicted RBP8.08□□□□□ -1.12
ATPAF1-211ENST00000534216 LARP1Q6PKG0 1096 aaKnown RBP8.08□□□□□ -1.12
ATPAF1-211ENST00000534216 SLC16A10Q8TF71 515 aa8.08□□□□□ -1.12
ATPAF1-211ENST00000534216 PTK7Q13308 1070 aa8.07□□□□□ -1.12
ATPAF1-211ENST00000534216 C4orf17Q53FE4 359 aa8.07□□□□□ -1.12
ATPAF1-211ENST00000534216 LCE2CQ5TA81 110 aa8.07□□□□□ -1.12
ATPAF1-211ENST00000534216 RHBDD1Q8TEB9 315 aa8.07□□□□□ -1.12
ATPAF1-211ENST00000534216 DYRK1BQ9Y463 629 aa8.07□□□□□ -1.12
ATPAF1-211ENST00000534216 FAM196BA6NMK8 535 aa8.06□□□□□ -1.12
ATPAF1-211ENST00000534216 USP17L15C9J2P7 530 aa8.06□□□□□ -1.12
ATPAF1-211ENST00000534216 USP17L10C9JJH3 530 aa8.06□□□□□ -1.12
ATPAF1-211ENST00000534216 USP17L13C9JLJ4 530 aa8.06□□□□□ -1.12
ATPAF1-211ENST00000534216 USP17L12C9JPN9 530 aa8.06□□□□□ -1.12
ATPAF1-211ENST00000534216 USP17L11C9JVI0 530 aa8.06□□□□□ -1.12
ATPAF1-211ENST00000534216 USP17L21D6R901 530 aa8.06□□□□□ -1.12
ATPAF1-211ENST00000534216 USP17L18D6R9N7 530 aa8.06□□□□□ -1.12
ATPAF1-211ENST00000534216 USP17L22D6RA61 530 aa8.06□□□□□ -1.12
ATPAF1-211ENST00000534216 USP17L17D6RBQ6 530 aa8.06□□□□□ -1.12
ATPAF1-211ENST00000534216 USP17L19D6RCP7 530 aa8.06□□□□□ -1.12
ATPAF1-211ENST00000534216 USP17L20D6RJB6 530 aa8.06□□□□□ -1.12
ATPAF1-211ENST00000534216 CDK2AP1O14519 115 aa8.06□□□□□ -1.12
ATPAF1-211ENST00000534216 ITGA6P23229 1130 aa8.06□□□□□ -1.12
ATPAF1-211ENST00000534216 PHKA2P46019 1235 aa8.06□□□□□ -1.12
ATPAF1-211ENST00000534216 USP17L24Q0WX57 530 aa8.06□□□□□ -1.12
ATPAF1-211ENST00000534216 CDCA8Q53HL2 280 aa8.06□□□□□ -1.12
ATPAF1-211ENST00000534216 CCDC82Q8N4S0 544 aa8.06□□□□□ -1.12
ATPAF1-211ENST00000534216 TIMMDC1Q9NPL8 285 aa8.06□□□□□ -1.12
ATPAF1-211ENST00000534216 SCHIP1Q9P0W5 487 aaPredicted RBP8.06□□□□□ -1.12
ATPAF1-211ENST00000534216 IQSEC3Q9UPP2 1182 aaPredicted RBP8.06□□□□□ -1.12
ATPAF1-211ENST00000534216 USP3Q9Y6I4 520 aa8.06□□□□□ -1.12
ATPAF1-211ENST00000534216 SFI1A8K8P3 1242 aa8.05□□□□□ -1.12
ATPAF1-211ENST00000534216 M0R2N6 131 aa8.05□□□□□ -1.12
ATPAF1-211ENST00000534216 VSIG8P0DPA2 414 aa8.05□□□□□ -1.12
ATPAF1-211ENST00000534216 EPHA4P54764 986 aa8.05□□□□□ -1.12
ATPAF1-211ENST00000534216 SRPK2P78362 688 aaKnown RBP8.05□□□□□ -1.12
ATPAF1-211ENST00000534216 TNS4Q8IZW8 715 aa8.05□□□□□ -1.12
ATPAF1-211ENST00000534216 ZNF295-AS1Q8N0V1 137 aa8.05□□□□□ -1.12
ATPAF1-211ENST00000534216 RBM19Q9Y4C8 960 aaKnown RBP8.05□□□□□ -1.12
ATPAF1-211ENST00000534216 ERBB4Q15303 1308 aa8.04□□□□□ -1.12
ATPAF1-211ENST00000534216 SEC13P55735 322 aa8.04□□□□□ -1.12
ATPAF1-211ENST00000534216 FOXK2Q01167 660 aa8.04□□□□□ -1.12
ATPAF1-211ENST00000534216 DPYDQ12882 1025 aa8.04□□□□□ -1.12
ATPAF1-211ENST00000534216 ANKMY2Q8IV38 441 aa8.04□□□□□ -1.12
ATPAF1-211ENST00000534216 IRF7Q92985 503 aa8.04□□□□□ -1.12
ATPAF1-211ENST00000534216 NIFKQ9BYG3 293 aaKnown RBP8.04□□□□□ -1.12
ATPAF1-211ENST00000534216 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.03□□□□□ -1.12
ATPAF1-211ENST00000534216 TSEN2Q8NCE0 465 aaKnown RBP8.03□□□□□ -1.12
ATPAF1-211ENST00000534216 NANOS1Q8WY41 292 aaKnown RBP8.03□□□□□ -1.12
ATPAF1-211ENST00000534216 CUEDC1Q9NWM3 386 aaPredicted RBP8.03□□□□□ -1.12
ATPAF1-211ENST00000534216 A0A1B0GTH6 734 aa8.02□□□□□ -1.13
ATPAF1-211ENST00000534216 PLA2G4AP47712 749 aa8.02□□□□□ -1.13
ATPAF1-211ENST00000534216 SLC9A9Q8IVB4 645 aa8.02□□□□□ -1.13
ATPAF1-211ENST00000534216 ARXQ96QS3 562 aa8.02□□□□□ -1.13
ATPAF1-211ENST00000534216 GAS2L1Q99501 681 aaPredicted RBP8.02□□□□□ -1.13
ATPAF1-211ENST00000534216 F11P03951 625 aa8.01□□□□□ -1.13
ATPAF1-211ENST00000534216 RIPOR1Q6ZS17 1223 aa8.01□□□□□ -1.13
ATPAF1-211ENST00000534216 VWA5B2Q8N398 1253 aa8.01□□□□□ -1.13
ATPAF1-211ENST00000534216 CDC14CA4D256 554 aa8□□□□□ -1.13
ATPAF1-211ENST00000534216 SUPT5HO00267 1087 aaKnown RBP8□□□□□ -1.13
ATPAF1-211ENST00000534216 TBCELQ5QJ74 424 aa8□□□□□ -1.13
ATPAF1-211ENST00000534216 TRIM22Q8IYM9 498 aa8□□□□□ -1.13
ATPAF1-211ENST00000534216 PBXIP1Q96AQ6 731 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms