RNA–Protein interactions for RNA: ENST00000534124.5

VPS51-214, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 5

Gene VPS51, Length 1,089 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-214ENST00000534124 NPC1L1Q9UHC9 1359 aa29.09■■■□□ 2.25
VPS51-214ENST00000534124 SULT6B1Q6IMI4 303 aa29.08■■■□□ 2.25
VPS51-214ENST00000534124 ATG3Q9NT62 314 aa29.08■■■□□ 2.25
VPS51-214ENST00000534124 KLHL34Q8N239 644 aa29.07■■■□□ 2.24
VPS51-214ENST00000534124 CICQ96RK0 1608 aaPredicted RBP29.06■■■□□ 2.24
VPS51-214ENST00000534124 C1orf141Q5JVX7 400 aa29.06■■■□□ 2.24
VPS51-214ENST00000534124 LINC00116Q8NCU8 138 aa29.06■■■□□ 2.24
VPS51-214ENST00000534124 SSFA2P28290 1259 aa29.05■■■□□ 2.24
VPS51-214ENST00000534124 MTHFSP49914 203 aa29.05■■■□□ 2.24
VPS51-214ENST00000534124 MSL1Q68DK7 614 aa29.05■■■□□ 2.24
VPS51-214ENST00000534124 ATP6V1AP38606 617 aa29.04■■■□□ 2.24
VPS51-214ENST00000534124 ITPK1Q13572 414 aa29.04■■■□□ 2.24
VPS51-214ENST00000534124 GOLGB1Q14789 3259 aaKnown RBP29.03■■■□□ 2.24
VPS51-214ENST00000534124 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.03■■■□□ 2.24
VPS51-214ENST00000534124 AMIGO3Q86WK7 504 aa29.03■■■□□ 2.24
VPS51-214ENST00000534124 CC2D1BQ5T0F9 858 aaKnown RBP29.02■■■□□ 2.24
VPS51-214ENST00000534124 COL3A1P02461 1466 aaPredicted RBP29■■■□□ 2.23
VPS51-214ENST00000534124 PHF14O94880 888 aa29■■■□□ 2.23
VPS51-214ENST00000534124 CABP4P57796 275 aa29■■■□□ 2.23
VPS51-214ENST00000534124 ADAMTS7Q9UKP4 1686 aa28.99■■■□□ 2.23
VPS51-214ENST00000534124 GNPATO15228 680 aa28.99■■■□□ 2.23
VPS51-214ENST00000534124 NLGN2Q8NFZ4 835 aa28.99■■■□□ 2.23
VPS51-214ENST00000534124 MRC1P22897 1456 aa28.98■■■□□ 2.23
VPS51-214ENST00000534124 TJP1Q07157 1748 aa28.97■■■□□ 2.23
VPS51-214ENST00000534124 GPR162Q16538 588 aa28.97■■■□□ 2.23
VPS51-214ENST00000534124 MYH14Q7Z406 1995 aaKnown RBP28.97■■■□□ 2.23
VPS51-214ENST00000534124 C4AP0C0L4 1744 aa28.97■■■□□ 2.23
VPS51-214ENST00000534124 DIAPH1O60610 1272 aaKnown RBP28.96■■■□□ 2.23
VPS51-214ENST00000534124 SLC4A9Q96Q91 983 aa28.95■■■□□ 2.22
VPS51-214ENST00000534124 RBM42Q9BTD8 480 aaKnown RBP28.95■■■□□ 2.22
VPS51-214ENST00000534124 CD2APQ9Y5K6 639 aa28.95■■■□□ 2.22
VPS51-214ENST00000534124 AKAP4Q5JQC9 854 aa28.94■■■□□ 2.22
VPS51-214ENST00000534124 CNTNAP4Q9C0A0 1308 aa28.94■■■□□ 2.22
VPS51-214ENST00000534124 HMOX1P09601 288 aa28.92■■■□□ 2.22
VPS51-214ENST00000534124 SMIM5Q71RC9 77 aa28.92■■■□□ 2.22
VPS51-214ENST00000534124 RC3H1Q5TC82 1133 aaKnown RBP28.91■■■□□ 2.22
VPS51-214ENST00000534124 NFATC2IPQ8NCF5 419 aa28.91■■■□□ 2.22
VPS51-214ENST00000534124 RTCBQ9Y3I0 505 aaKnown RBP28.91■■■□□ 2.22
VPS51-214ENST00000534124 KIF13BQ9NQT8 1826 aa28.91■■■□□ 2.22
VPS51-214ENST00000534124 ADRA2BP18089 450 aa28.9■■■□□ 2.22
VPS51-214ENST00000534124 PELP1Q8IZL8 1130 aaKnown RBP28.89■■■□□ 2.22
VPS51-214ENST00000534124 UBR2Q8IWV8 1755 aa28.88■■■□□ 2.21
VPS51-214ENST00000534124 SLC52A2Q9HAB3 445 aa28.87■■■□□ 2.21
VPS51-214ENST00000534124 PTCD1O75127 700 aaKnown RBP28.86■■■□□ 2.21
VPS51-214ENST00000534124 TRAPPC3LQ5T215 181 aa28.86■■■□□ 2.21
VPS51-214ENST00000534124 ZNF784Q8NCA9 323 aaPredicted RBP28.86■■■□□ 2.21
VPS51-214ENST00000534124 GRIN3BO60391 1043 aa28.84■■■□□ 2.21
VPS51-214ENST00000534124 YBX3P16989 372 aaKnown RBP eCLIP28.84■■■□□ 2.217e-7■■■■□ 20.4
VPS51-214ENST00000534124 SIPA1L3O60292 1781 aaPredicted RBP28.83■■■□□ 2.21
VPS51-214ENST00000534124 RNMTO43148 476 aaKnown RBP28.83■■■□□ 2.21
VPS51-214ENST00000534124 RPS6KA4O75676 772 aa28.83■■■□□ 2.21
VPS51-214ENST00000534124 MTHFSDQ2M296 383 aaKnown RBP28.83■■■□□ 2.21
VPS51-214ENST00000534124 KCPQ6ZWJ8 1503 aa28.83■■■□□ 2.21
VPS51-214ENST00000534124 CNGB1Q14028 1251 aaPredicted RBP28.82■■■□□ 2.2
VPS51-214ENST00000534124 KIAA1551Q9HCM1 1747 aa28.82■■■□□ 2.2
VPS51-214ENST00000534124 LGR6Q9HBX8 967 aa28.81■■■□□ 2.2
VPS51-214ENST00000534124 MMP10P09238 476 aa28.8■■■□□ 2.2
VPS51-214ENST00000534124 CRKLP46109 303 aaKnown RBP28.8■■■□□ 2.2
VPS51-214ENST00000534124 NLGN1Q8N2Q7 840 aa28.8■■■□□ 2.2
VPS51-214ENST00000534124 ARHGEF1Q92888 912 aaKnown RBP28.8■■■□□ 2.2
VPS51-214ENST00000534124 U2SURPO15042 1029 aaKnown RBP28.79■■■□□ 2.2
VPS51-214ENST00000534124 RFC4P35249 363 aa28.78■■■□□ 2.2
VPS51-214ENST00000534124 CFAP53Q96M91 514 aa28.78■■■□□ 2.2
VPS51-214ENST00000534124 C10orf71Q711Q0 1435 aa28.77■■■□□ 2.2
VPS51-214ENST00000534124 GAS2L2Q8NHY3 880 aa28.76■■■□□ 2.19
VPS51-214ENST00000534124 N4BP2Q86UW6 1770 aaPredicted RBP28.75■■■□□ 2.19
VPS51-214ENST00000534124 GYS1P13807 737 aa28.75■■■□□ 2.19
VPS51-214ENST00000534124 BRCA1P38398 1863 aaKnown RBP28.74■■■□□ 2.19
VPS51-214ENST00000534124 PXDNLA1KZ92 1463 aa28.73■■■□□ 2.19
VPS51-214ENST00000534124 USP42Q9H9J4 1324 aaKnown RBP28.72■■■□□ 2.19
VPS51-214ENST00000534124 SLC39A6Q13433 755 aa28.72■■■□□ 2.19
VPS51-214ENST00000534124 INTS5Q6P9B9 1019 aaKnown RBP28.71■■■□□ 2.19
VPS51-214ENST00000534124 DNAJC10Q8IXB1 793 aa28.71■■■□□ 2.19
VPS51-214ENST00000534124 CCDC87Q9NVE4 849 aa28.71■■■□□ 2.19
VPS51-214ENST00000534124 GNAT3A8MTJ3 354 aa28.7■■■□□ 2.18
VPS51-214ENST00000534124 PPP2R1AP30153 589 aa28.7■■■□□ 2.18
VPS51-214ENST00000534124 VSIG10Q8N0Z9 540 aa28.7■■■□□ 2.18
VPS51-214ENST00000534124 NUDCQ9Y266 331 aa28.69■■■□□ 2.18
VPS51-214ENST00000534124 RSPH6AQ9H0K4 717 aa28.68■■■□□ 2.18
VPS51-214ENST00000534124 SOS1Q07889 1333 aaPredicted RBP28.68■■■□□ 2.18
VPS51-214ENST00000534124 CYP19A1P11511 503 aaPredicted RBP28.67■■■□□ 2.18
VPS51-214ENST00000534124 TEFQ10587 303 aa28.67■■■□□ 2.18
VPS51-214ENST00000534124 PARP3Q9Y6F1 533 aa28.67■■■□□ 2.18
VPS51-214ENST00000534124 CEMIPQ8WUJ3 1361 aa28.66■■■□□ 2.18
VPS51-214ENST00000534124 PRKAR2BP31323 418 aa28.66■■■□□ 2.18
VPS51-214ENST00000534124 TGFB2P61812 414 aa28.66■■■□□ 2.18
VPS51-214ENST00000534124 TTC5Q8N0Z6 440 aa28.66■■■□□ 2.18
VPS51-214ENST00000534124 COL15A1P39059 1388 aa28.65■■■□□ 2.18
VPS51-214ENST00000534124 SRP68Q9UHB9 627 aaKnown RBP28.65■■■□□ 2.18
VPS51-214ENST00000534124 ARFGEF1Q9Y6D6 1849 aa28.64■■■□□ 2.18
VPS51-214ENST00000534124 IL17REQ8NFR9 667 aa28.64■■■□□ 2.18
VPS51-214ENST00000534124 ADCY9O60503 1353 aa28.62■■■□□ 2.17
VPS51-214ENST00000534124 AFDNP55196 1824 aaKnown RBP28.62■■■□□ 2.17
VPS51-214ENST00000534124 SCN7AQ01118 1682 aa28.62■■■□□ 2.17
VPS51-214ENST00000534124 FKBP8Q14318 412 aa28.62■■■□□ 2.17
VPS51-214ENST00000534124 PHACTR3Q96KR7 559 aa28.62■■■□□ 2.17
VPS51-214ENST00000534124 NRXN2Q9P2S2 1712 aa28.61■■■□□ 2.17
VPS51-214ENST00000534124 ZPR1O75312 459 aa28.61■■■□□ 2.17
VPS51-214ENST00000534124 U2AF1L5P0DN76 240 aaPredicted RBP28.61■■■□□ 2.17
VPS51-214ENST00000534124 U2AF1Q01081 240 aaKnown RBP eCLIP28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms