RNA–Protein interactions for RNA: ENST00000534001.1

APLP2-223, Transcript of amyloid beta precursor like protein 2, human

TSL 4

Gene APLP2, Length 585 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APLP2-223	ENST00000534001	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	28.68	■■■□□ 2.18
APLP2-223	ENST00000534001	ZNF784	Q8NCA9	323 aa	Predicted RBP	28.68	■■■□□ 2.18
APLP2-223	ENST00000534001	ERVV-2	B6SEH9	535 aa		28.66	■■■□□ 2.18
APLP2-223	ENST00000534001	DCAF5	Q96JK2	942 aa		28.66	■■■□□ 2.18
APLP2-223	ENST00000534001	PHF14	O94880	888 aa		28.65	■■■□□ 2.18
APLP2-223	ENST00000534001	YBX3	P16989	372 aa	Known RBP eCLIP	28.65	■■■□□ 2.18
APLP2-223	ENST00000534001	PLEKHO1	Q53GL0	409 aa	Predicted RBP	28.65	■■■□□ 2.18
APLP2-223	ENST00000534001	ZNF530	Q6P9A1	599 aa	Predicted RBP	28.65	■■■□□ 2.18
APLP2-223	ENST00000534001	COL5A3	P25940	1745 aa	Predicted RBP	28.65	■■■□□ 2.18
APLP2-223	ENST00000534001	SSFA2	P28290	1259 aa		28.64	■■■□□ 2.18
APLP2-223	ENST00000534001	ATP6V1A	P38606	617 aa		28.64	■■■□□ 2.18
APLP2-223	ENST00000534001	GPR162	Q16538	588 aa		28.64	■■■□□ 2.18
APLP2-223	ENST00000534001	SULT6B1	Q6IMI4	303 aa		28.64	■■■□□ 2.18
APLP2-223	ENST00000534001	HMGB2	P26583	209 aa	Known RBP	28.63	■■■□□ 2.17
APLP2-223	ENST00000534001	AMOT	Q4VCS5	1084 aa		28.62	■■■□□ 2.17
APLP2-223	ENST00000534001	GNPAT	O15228	680 aa		28.6	■■■□□ 2.17
APLP2-223	ENST00000534001	HSP90AB1	P08238	724 aa	Known RBP	28.6	■■■□□ 2.17
APLP2-223	ENST00000534001	MYH14	Q7Z406	1995 aa	Known RBP	28.59	■■■□□ 2.17
APLP2-223	ENST00000534001	MTHFS	P49914	203 aa		28.59	■■■□□ 2.17
APLP2-223	ENST00000534001	SCN11A	Q9UI33	1791 aa		28.59	■■■□□ 2.17
APLP2-223	ENST00000534001	CD2AP	Q9Y5K6	639 aa		28.58	■■■□□ 2.17
APLP2-223	ENST00000534001	COL3A1	P02461	1466 aa	Predicted RBP	28.57	■■■□□ 2.16
APLP2-223	ENST00000534001	CIC	Q96RK0	1608 aa	Predicted RBP	28.57	■■■□□ 2.16
APLP2-223	ENST00000534001	PELP1	Q8IZL8	1130 aa	Known RBP	28.56	■■■□□ 2.16
APLP2-223	ENST00000534001	TJP1	Q07157	1748 aa		28.55	■■■□□ 2.16
APLP2-223	ENST00000534001	CABP4	P57796	275 aa		28.54	■■■□□ 2.16
APLP2-223	ENST00000534001	RBM42	Q9BTD8	480 aa	Known RBP	28.54	■■■□□ 2.16
APLP2-223	ENST00000534001	ADAMTS7	Q9UKP4	1686 aa		28.54	■■■□□ 2.16
APLP2-223	ENST00000534001	NPC1L1	Q9UHC9	1359 aa		28.53	■■■□□ 2.16
APLP2-223	ENST00000534001	CNTNAP4	Q9C0A0	1308 aa		28.53	■■■□□ 2.16
APLP2-223	ENST00000534001	CC2D1B	Q5T0F9	858 aa	Known RBP	28.53	■■■□□ 2.16
APLP2-223	ENST00000534001	MRC1	P22897	1456 aa		28.53	■■■□□ 2.16
APLP2-223	ENST00000534001	C4A	P0C0L4	1744 aa		28.52	■■■□□ 2.16
APLP2-223	ENST00000534001	KIAA1551	Q9HCM1	1747 aa		28.52	■■■□□ 2.16
APLP2-223	ENST00000534001	RC3H1	Q5TC82	1133 aa	Known RBP	28.52	■■■□□ 2.16
APLP2-223	ENST00000534001	NFATC2IP	Q8NCF5	419 aa		28.52	■■■□□ 2.16
APLP2-223	ENST00000534001	C1orf141	Q5JVX7	400 aa		28.51	■■■□□ 2.15
APLP2-223	ENST00000534001	HMOX1	P09601	288 aa		28.5	■■■□□ 2.15
APLP2-223	ENST00000534001	KIF13B	Q9NQT8	1826 aa		28.49	■■■□□ 2.15
APLP2-223	ENST00000534001	LGR6	Q9HBX8	967 aa		28.49	■■■□□ 2.15
APLP2-223	ENST00000534001	VIRMA	Q69YN4	1812 aa	Known RBP	28.48	■■■□□ 2.15
APLP2-223	ENST00000534001	AKAP4	Q5JQC9	854 aa		28.48	■■■□□ 2.15
APLP2-223	ENST00000534001	ARHGEF1	Q92888	912 aa	Known RBP	28.48	■■■□□ 2.15
APLP2-223	ENST00000534001	PTCD1	O75127	700 aa	Known RBP	28.47	■■■□□ 2.15
APLP2-223	ENST00000534001	RPS6KA4	O75676	772 aa		28.47	■■■□□ 2.15
APLP2-223	ENST00000534001	RTCB	Q9Y3I0	505 aa	Known RBP	28.47	■■■□□ 2.15
APLP2-223	ENST00000534001	MMP10	P09238	476 aa		28.46	■■■□□ 2.15
APLP2-223	ENST00000534001	GRIN3B	O60391	1043 aa		28.45	■■■□□ 2.14
APLP2-223	ENST00000534001	MTHFSD	Q2M296	383 aa	Known RBP	28.45	■■■□□ 2.14
APLP2-223	ENST00000534001	TRAPPC3L	Q5T215	181 aa		28.45	■■■□□ 2.14
APLP2-223	ENST00000534001	KCP	Q6ZWJ8	1503 aa		28.44	■■■□□ 2.14
APLP2-223	ENST00000534001	DIAPH1	O60610	1272 aa	Known RBP	28.44	■■■□□ 2.14
APLP2-223	ENST00000534001	GYS1	P13807	737 aa		28.44	■■■□□ 2.14
APLP2-223	ENST00000534001	SLC52A2	Q9HAB3	445 aa		28.44	■■■□□ 2.14
APLP2-223	ENST00000534001	PXDNL	A1KZ92	1463 aa		28.43	■■■□□ 2.14
APLP2-223	ENST00000534001	RNMT	O43148	476 aa	Known RBP	28.43	■■■□□ 2.14
APLP2-223	ENST00000534001	ADRA2B	P18089	450 aa		28.43	■■■□□ 2.14
APLP2-223	ENST00000534001	CRKL	P46109	303 aa	Known RBP	28.43	■■■□□ 2.14
APLP2-223	ENST00000534001	C10orf71	Q711Q0	1435 aa		28.43	■■■□□ 2.14
APLP2-223	ENST00000534001	ADCY9	O60503	1353 aa		28.4	■■■□□ 2.14
APLP2-223	ENST00000534001	INTS5	Q6P9B9	1019 aa	Known RBP	28.4	■■■□□ 2.14
APLP2-223	ENST00000534001	WWC3	Q9ULE0	1092 aa		28.4	■■■□□ 2.14
APLP2-223	ENST00000534001	SLC39A6	Q13433	755 aa		28.38	■■■□□ 2.13
APLP2-223	ENST00000534001	NLGN1	Q8N2Q7	840 aa		28.38	■■■□□ 2.13
APLP2-223	ENST00000534001	N4BP2	Q86UW6	1770 aa	Predicted RBP	28.37	■■■□□ 2.13
APLP2-223	ENST00000534001	UBR2	Q8IWV8	1755 aa		28.37	■■■□□ 2.13
APLP2-223	ENST00000534001	DNAJC10	Q8IXB1	793 aa		28.37	■■■□□ 2.13
APLP2-223	ENST00000534001	SRP68	Q9UHB9	627 aa	Known RBP	28.37	■■■□□ 2.13
APLP2-223	ENST00000534001	CNGB1	Q14028	1251 aa	Predicted RBP	28.36	■■■□□ 2.13
APLP2-223	ENST00000534001	USP42	Q9H9J4	1324 aa	Known RBP	28.35	■■■□□ 2.13
APLP2-223	ENST00000534001	ATP10D	Q9P241	1426 aa		28.35	■■■□□ 2.13
APLP2-223	ENST00000534001	RFC4	P35249	363 aa		28.34	■■■□□ 2.13
APLP2-223	ENST00000534001	C1QTNF8	P60827	252 aa		28.34	■■■□□ 2.13
APLP2-223	ENST00000534001	FKBP8	Q14318	412 aa		28.33	■■■□□ 2.13
APLP2-223	ENST00000534001	BRCA1	P38398	1863 aa	Known RBP	28.33	■■■□□ 2.13
APLP2-223	ENST00000534001	SIPA1L3	O60292	1781 aa	Predicted RBP	28.32	■■■□□ 2.12
APLP2-223	ENST00000534001	CYP19A1	P11511	503 aa	Predicted RBP	28.32	■■■□□ 2.12
APLP2-223	ENST00000534001	DDR1	Q08345	913 aa		28.32	■■■□□ 2.12
APLP2-223	ENST00000534001	SOS1	Q07889	1333 aa	Predicted RBP	28.31	■■■□□ 2.12
APLP2-223	ENST00000534001	IL17RE	Q8NFR9	667 aa		28.3	■■■□□ 2.12
APLP2-223	ENST00000534001	CCDC87	Q9NVE4	849 aa		28.29	■■■□□ 2.12
APLP2-223	ENST00000534001		A0A0G2JLW4	131 aa		28.28	■■■□□ 2.12
APLP2-223	ENST00000534001	U2SURP	O15042	1029 aa	Known RBP	28.28	■■■□□ 2.12
APLP2-223	ENST00000534001	TGFB2	P61812	414 aa		28.28	■■■□□ 2.12
APLP2-223	ENST00000534001	KCNA3	P22001	575 aa		28.27	■■■□□ 2.12
APLP2-223	ENST00000534001	ZBTB1	Q9Y2K1	713 aa		28.27	■■■□□ 2.12
APLP2-223	ENST00000534001	DPEP1	P16444	411 aa		28.26	■■■□□ 2.11
APLP2-223	ENST00000534001	PHACTR3	Q96KR7	559 aa		28.26	■■■□□ 2.11
APLP2-223	ENST00000534001	RSPH6A	Q9H0K4	717 aa		28.26	■■■□□ 2.11
APLP2-223	ENST00000534001	GIGYF1	O75420	1035 aa	Predicted RBP	28.25	■■■□□ 2.11
APLP2-223	ENST00000534001	TM4SF1	P30408	202 aa		28.25	■■■□□ 2.11
APLP2-223	ENST00000534001	PARP3	Q9Y6F1	533 aa		28.25	■■■□□ 2.11
APLP2-223	ENST00000534001	CEMIP	Q8WUJ3	1361 aa		28.24	■■■□□ 2.11
APLP2-223	ENST00000534001	VSIG10	Q8N0Z9	540 aa		28.24	■■■□□ 2.11
APLP2-223	ENST00000534001	BCL2L12	Q9HB09	334 aa		28.24	■■■□□ 2.11
APLP2-223	ENST00000534001	CEP350	Q5VT06	3117 aa		28.23	■■■□□ 2.11
APLP2-223	ENST00000534001	POLRMT	O00411	1230 aa	Known RBP	28.23	■■■□□ 2.11
APLP2-223	ENST00000534001	PPP2R1A	P30153	589 aa		28.23	■■■□□ 2.11
APLP2-223	ENST00000534001	USPL1	Q5W0Q7	1092 aa		28.22	■■■□□ 2.11
APLP2-223	ENST00000534001	GAS2L2	Q8NHY3	880 aa		28.22	■■■□□ 2.11

Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms