RNA–Protein interactions for RNA: ENST00000533657.5

CAPRIN1-215, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 2,774 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-215ENST00000533657 RRP7AQ9Y3A4 280 aaKnown RBP13.38□□□□□ -0.27
CAPRIN1-215ENST00000533657 LAMB4A4D0S4 1761 aa13.38□□□□□ -0.27
CAPRIN1-215ENST00000533657 EXOC5O00471 708 aa13.38□□□□□ -0.27
CAPRIN1-215ENST00000533657 RNMTO43148 476 aaKnown RBP13.38□□□□□ -0.27
CAPRIN1-215ENST00000533657 ERVV-2B6SEH9 535 aa13.37□□□□□ -0.27
CAPRIN1-215ENST00000533657 DDB1Q16531 1140 aa13.37□□□□□ -0.27
CAPRIN1-215ENST00000533657 IL17REQ8NFR9 667 aa13.37□□□□□ -0.27
CAPRIN1-215ENST00000533657 GNAI1P63096 354 aa13.37□□□□□ -0.27
CAPRIN1-215ENST00000533657 CFAP44Q96MT7 982 aa13.37□□□□□ -0.27
CAPRIN1-215ENST00000533657 ILDR1Q86SU0 546 aaPredicted RBP13.36□□□□□ -0.27
CAPRIN1-215ENST00000533657 MYH16Q9H6N6 1097 aa13.36□□□□□ -0.27
CAPRIN1-215ENST00000533657 SOS1Q07889 1333 aaPredicted RBP13.36□□□□□ -0.27
CAPRIN1-215ENST00000533657 RGPD3A6NKT7 1758 aaPredicted RBP13.36□□□□□ -0.27
CAPRIN1-215ENST00000533657 RGPD4Q7Z3J3 1758 aa13.36□□□□□ -0.27
CAPRIN1-215ENST00000533657 RGS17Q9UGC6 210 aaPredicted RBP13.36□□□□□ -0.27
CAPRIN1-215ENST00000533657 CCDC9Q9Y3X0 531 aaKnown RBP13.36□□□□□ -0.27
CAPRIN1-215ENST00000533657 CHL1O00533 1208 aa13.35□□□□□ -0.27
CAPRIN1-215ENST00000533657 PODXL2Q9NZ53 605 aa13.35□□□□□ -0.27
CAPRIN1-215ENST00000533657 FAM98CQ17RN3 349 aaKnown RBP13.35□□□□□ -0.27
CAPRIN1-215ENST00000533657 USP35Q9P2H5 1018 aa13.35□□□□□ -0.27
CAPRIN1-215ENST00000533657 CT47B1P0C2W7 299 aaPredicted RBP13.34□□□□□ -0.27
CAPRIN1-215ENST00000533657 NEUROD2Q15784 382 aa13.34□□□□□ -0.27
CAPRIN1-215ENST00000533657 DUSP27Q5VZP5 1158 aa13.34□□□□□ -0.27
CAPRIN1-215ENST00000533657 SLC52A2Q9HAB3 445 aa13.34□□□□□ -0.27
CAPRIN1-215ENST00000533657 RGS12O14924 1447 aa13.34□□□□□ -0.27
CAPRIN1-215ENST00000533657 TAF7Q15545 349 aaPredicted RBP13.33□□□□□ -0.27
CAPRIN1-215ENST00000533657 KCPQ6ZWJ8 1503 aa13.33□□□□□ -0.28
CAPRIN1-215ENST00000533657 MCM10Q7L590 875 aa13.33□□□□□ -0.28
CAPRIN1-215ENST00000533657 HEG1Q9ULI3 1381 aa13.33□□□□□ -0.28
CAPRIN1-215ENST00000533657 MARCH10Q8NA82 808 aaPredicted RBP13.32□□□□□ -0.28
CAPRIN1-215ENST00000533657 LY75O60449 1722 aa13.32□□□□□ -0.28
CAPRIN1-215ENST00000533657 BTAF1O14981 1849 aa13.32□□□□□ -0.28
CAPRIN1-215ENST00000533657 LGR6Q9HBX8 967 aa13.32□□□□□ -0.28
CAPRIN1-215ENST00000533657 MPRIPQ6WCQ1 1025 aa13.32□□□□□ -0.28
CAPRIN1-215ENST00000533657 CACNA1FO60840 1977 aa13.32□□□□□ -0.28
CAPRIN1-215ENST00000533657 C5P01031 1676 aa13.31□□□□□ -0.28
CAPRIN1-215ENST00000533657 RREB1Q92766 1687 aa13.31□□□□□ -0.28
CAPRIN1-215ENST00000533657 SEPT12Q8IYM1 358 aa13.31□□□□□ -0.28
CAPRIN1-215ENST00000533657 SPINK5Q9NQ38 1064 aaPredicted RBP13.31□□□□□ -0.28
CAPRIN1-215ENST00000533657 RXRBP28702 533 aa13.31□□□□□ -0.28
CAPRIN1-215ENST00000533657 DCTN1Q14203 1278 aa13.31□□□□□ -0.28
CAPRIN1-215ENST00000533657 TNS1Q9HBL0 1735 aaKnown RBP13.31□□□□□ -0.28
CAPRIN1-215ENST00000533657 TEFQ10587 303 aa13.3□□□□□ -0.28
CAPRIN1-215ENST00000533657 ZNF428Q96B54 188 aa13.3□□□□□ -0.28
CAPRIN1-215ENST00000533657 TJP1Q07157 1748 aa13.3□□□□□ -0.28
CAPRIN1-215ENST00000533657 IL27Q8NEV9 243 aa13.3□□□□□ -0.28
CAPRIN1-215ENST00000533657 CDCA7LQ96GN5 454 aa13.3□□□□□ -0.28
CAPRIN1-215ENST00000533657 HOXB7P09629 217 aa13.29□□□□□ -0.28
CAPRIN1-215ENST00000533657 THUMPD2Q9BTF0 503 aaKnown RBP13.29□□□□□ -0.28
CAPRIN1-215ENST00000533657 MBIPQ9NS73 344 aa13.29□□□□□ -0.28
CAPRIN1-215ENST00000533657 COL5A3P25940 1745 aaPredicted RBP13.29□□□□□ -0.28
CAPRIN1-215ENST00000533657 DDX54Q8TDD1 881 aaKnown RBP13.29□□□□□ -0.28
CAPRIN1-215ENST00000533657 RTN4Q9NQC3 1192 aaKnown RBP13.28□□□□□ -0.28
CAPRIN1-215ENST00000533657 CABP4P57796 275 aa13.28□□□□□ -0.28
CAPRIN1-215ENST00000533657 POTEAQ6S8J7 498 aa13.28□□□□□ -0.28
CAPRIN1-215ENST00000533657 TSPYL4Q9UJ04 414 aa13.26□□□□□ -0.29
CAPRIN1-215ENST00000533657 N4BP2Q86UW6 1770 aaPredicted RBP13.26□□□□□ -0.29
CAPRIN1-215ENST00000533657 BTBD11A6QL63 1104 aa13.26□□□□□ -0.29
CAPRIN1-215ENST00000533657 KRT27Q7Z3Y8 459 aa13.26□□□□□ -0.29
CAPRIN1-215ENST00000533657 CHMP4AQ9BY43 222 aa13.26□□□□□ -0.29
CAPRIN1-215ENST00000533657 NBR1Q14596 966 aa13.26□□□□□ -0.29
CAPRIN1-215ENST00000533657 RTL5Q5HYW3 569 aaPredicted RBP13.26□□□□□ -0.29
CAPRIN1-215ENST00000533657 TMOD3Q9NYL9 352 aa13.26□□□□□ -0.29
CAPRIN1-215ENST00000533657 EIF4A1P60842 406 aaKnown RBP13.25□□□□□ -0.29
CAPRIN1-215ENST00000533657 BRPF1P55201 1214 aaPredicted RBP13.25□□□□□ -0.29
CAPRIN1-215ENST00000533657 ZNF790Q6PG37 636 aa13.25□□□□□ -0.29
CAPRIN1-215ENST00000533657 FAM196AQ6ZSG2 479 aa13.25□□□□□ -0.29
CAPRIN1-215ENST00000533657 NFATC2IPQ8NCF5 419 aa13.25□□□□□ -0.29
CAPRIN1-215ENST00000533657 VSIG10Q8N0Z9 540 aa13.24□□□□□ -0.29
CAPRIN1-215ENST00000533657 TAF1LQ8IZX4 1826 aa13.24□□□□□ -0.29
CAPRIN1-215ENST00000533657 GLIPR1L2Q4G1C9 344 aa13.24□□□□□ -0.29
CAPRIN1-215ENST00000533657 TSR2Q969E8 191 aaKnown RBP13.24□□□□□ -0.29
CAPRIN1-215ENST00000533657 SENP3-EIF4A1A0A087X0R7 540 aa13.23□□□□□ -0.29
CAPRIN1-215ENST00000533657 ALDH1L2Q3SY69 923 aa13.23□□□□□ -0.29
CAPRIN1-215ENST00000533657 PIGBQ92521 554 aa13.23□□□□□ -0.29
CAPRIN1-215ENST00000533657 RNF123Q5XPI4 1314 aa13.23□□□□□ -0.29
CAPRIN1-215ENST00000533657 EXOSC9Q06265 439 aaKnown RBP13.23□□□□□ -0.29
CAPRIN1-215ENST00000533657 SMARCC1Q92922 1105 aaPredicted RBP13.22□□□□□ -0.29
CAPRIN1-215ENST00000533657 BCL11BQ9C0K0 894 aaPredicted RBP13.22□□□□□ -0.29
CAPRIN1-215ENST00000533657 FMNL2Q96PY5 1086 aa13.21□□□□□ -0.29
CAPRIN1-215ENST00000533657 ERBB4Q15303 1308 aa13.21□□□□□ -0.29
CAPRIN1-215ENST00000533657 VAMP4O75379 141 aa13.21□□□□□ -0.29
CAPRIN1-215ENST00000533657 ATG3Q9NT62 314 aa13.21□□□□□ -0.29
CAPRIN1-215ENST00000533657 A0A0G2JS52 829 aa13.2□□□□□ -0.3
CAPRIN1-215ENST00000533657 PRIM1P49642 420 aaKnown RBP13.2□□□□□ -0.3
CAPRIN1-215ENST00000533657 TTC5Q8N0Z6 440 aa13.2□□□□□ -0.3
CAPRIN1-215ENST00000533657 NOP58Q9Y2X3 529 aaKnown RBP13.2□□□□□ -0.3
CAPRIN1-215ENST00000533657 LAS1LQ9Y4W2 734 aaKnown RBP13.2□□□□□ -0.3
CAPRIN1-215ENST00000533657 TWISTNBQ3B726 338 aaPredicted RBP13.2□□□□□ -0.3
CAPRIN1-215ENST00000533657 C8orf58Q8NAV2 365 aa13.2□□□□□ -0.3
CAPRIN1-215ENST00000533657 GIGYF1O75420 1035 aaPredicted RBP13.2□□□□□ -0.3
CAPRIN1-215ENST00000533657 HMGB2P26583 209 aaKnown RBP13.19□□□□□ -0.3
CAPRIN1-215ENST00000533657 TEX13AQ9BXU3 409 aaPredicted RBP13.19□□□□□ -0.3
CAPRIN1-215ENST00000533657 RCAN3Q9UKA8 241 aa13.19□□□□□ -0.3
CAPRIN1-215ENST00000533657 QSER1Q2KHR3 1735 aa13.19□□□□□ -0.3
CAPRIN1-215ENST00000533657 KCNQ3O43525 872 aa13.18□□□□□ -0.3
CAPRIN1-215ENST00000533657 SNRPA1P09661 255 aaKnown RBP13.18□□□□□ -0.3
CAPRIN1-215ENST00000533657 RARSP54136 660 aaKnown RBP13.18□□□□□ -0.3
CAPRIN1-215ENST00000533657 MIS18AQ9NYP9 233 aa13.18□□□□□ -0.3
CAPRIN1-215ENST00000533657 PALLDQ8WX93 1383 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms