RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 LGR6Q9HBX8 967 aa27.3■■□□□ 1.96
CCS-208ENST00000533244 MAP3K5Q99683 1374 aa27.3■■□□□ 1.96
CCS-208ENST00000533244 ZNF831Q5JPB2 1677 aa27.28■■□□□ 1.96
CCS-208ENST00000533244 NFATC2IPQ8NCF5 419 aa27.27■■□□□ 1.96
CCS-208ENST00000533244 SLC52A2Q9HAB3 445 aa27.27■■□□□ 1.96
CCS-208ENST00000533244 TUBGCP6Q96RT7 1819 aa27.27■■□□□ 1.96
CCS-208ENST00000533244 LOC102724428A0A0B4J2F2 783 aa27.26■■□□□ 1.95
CCS-208ENST00000533244 SIK1P57059 783 aa27.26■■□□□ 1.95
CCS-208ENST00000533244 GNAT3A8MTJ3 354 aa27.25■■□□□ 1.95
CCS-208ENST00000533244 HMGB2P26583 209 aaKnown RBP27.24■■□□□ 1.95
CCS-208ENST00000533244 PLEKHF1Q96S99 279 aa27.24■■□□□ 1.95
CCS-208ENST00000533244 PDGFDQ9GZP0 370 aaPredicted RBP27.24■■□□□ 1.95
CCS-208ENST00000533244 CEMIPQ8WUJ3 1361 aa27.23■■□□□ 1.95
CCS-208ENST00000533244 C4BP0C0L5 1744 aa27.23■■□□□ 1.95
CCS-208ENST00000533244 IL17REQ8NFR9 667 aa27.23■■□□□ 1.95
CCS-208ENST00000533244 CICQ96RK0 1608 aaPredicted RBP27.22■■□□□ 1.95
CCS-208ENST00000533244 SIPA1L3O60292 1781 aaPredicted RBP27.21■■□□□ 1.95
CCS-208ENST00000533244 SLC4A9Q96Q91 983 aa27.21■■□□□ 1.95
CCS-208ENST00000533244 ITPK1Q13572 414 aa27.2■■□□□ 1.94
CCS-208ENST00000533244 PNPLA7Q6ZV29 1317 aa27.2■■□□□ 1.94
CCS-208ENST00000533244 COL5A3P25940 1745 aaPredicted RBP27.18■■□□□ 1.94
CCS-208ENST00000533244 ATP6V1AP38606 617 aa27.17■■□□□ 1.94
CCS-208ENST00000533244 LINC00116Q8NCU8 138 aa27.17■■□□□ 1.94
CCS-208ENST00000533244 PNNQ9H307 717 aaKnown RBP27.17■■□□□ 1.94
CCS-208ENST00000533244 TFCP2L1Q9NZI6 479 aa27.17■■□□□ 1.94
CCS-208ENST00000533244 KCPQ6ZWJ8 1503 aa27.16■■□□□ 1.94
CCS-208ENST00000533244 UBR2Q8IWV8 1755 aa27.16■■□□□ 1.94
CCS-208ENST00000533244 HTATSF1O43719 755 aaKnown RBP27.16■■□□□ 1.94
CCS-208ENST00000533244 RBM42Q9BTD8 480 aaKnown RBP27.16■■□□□ 1.94
CCS-208ENST00000533244 UBR3Q6ZT12 1888 aa27.15■■□□□ 1.94
CCS-208ENST00000533244 DLG5Q8TDM6 1919 aa27.15■■□□□ 1.94
CCS-208ENST00000533244 TJP1Q07157 1748 aa27.15■■□□□ 1.94
CCS-208ENST00000533244 NEFMP07197 916 aa27.15■■□□□ 1.94
CCS-208ENST00000533244 SPON1Q9HCB6 807 aa27.15■■□□□ 1.94
CCS-208ENST00000533244 TEFQ10587 303 aa27.14■■□□□ 1.93
CCS-208ENST00000533244 PTCD1O75127 700 aaKnown RBP27.13■■□□□ 1.93
CCS-208ENST00000533244 ZBTB7AO95365 584 aa27.12■■□□□ 1.93
CCS-208ENST00000533244 SLC39A6Q13433 755 aa27.12■■□□□ 1.93
CCS-208ENST00000533244 NFE2L2Q16236 605 aa27.12■■□□□ 1.93
CCS-208ENST00000533244 MTFR1LQ9H019 292 aa27.12■■□□□ 1.93
CCS-208ENST00000533244 COL24A1Q17RW2 1714 aa27.11■■□□□ 1.93
CCS-208ENST00000533244 MAPK8IP3Q9UPT6 1336 aa27.11■■□□□ 1.93
CCS-208ENST00000533244 SLC16A10Q8TF71 515 aa27.11■■□□□ 1.93
CCS-208ENST00000533244 RTF1Q92541 710 aaKnown RBP27.11■■□□□ 1.93
CCS-208ENST00000533244 AK7Q96M32 723 aa27.11■■□□□ 1.93
CCS-208ENST00000533244 WDR43Q15061 677 aaKnown RBP eCLIP27.1■■□□□ 1.93
CCS-208ENST00000533244 AMIGO3Q86WK7 504 aa27.1■■□□□ 1.93
CCS-208ENST00000533244 MCM10Q7L590 875 aa27.09■■□□□ 1.93
CCS-208ENST00000533244 COL23A1Q86Y22 540 aaPredicted RBP27.09■■□□□ 1.93
CCS-208ENST00000533244 CNTNAP4Q9C0A0 1308 aa27.09■■□□□ 1.93
CCS-208ENST00000533244 PTGER2P43116 358 aa27.08■■□□□ 1.93
CCS-208ENST00000533244 FLAD1Q8NFF5 587 aa27.08■■□□□ 1.93
CCS-208ENST00000533244 SGIP1Q9BQI5 828 aa27.08■■□□□ 1.93
CCS-208ENST00000533244 ANP32CO43423 234 aa27.07■■□□□ 1.92
CCS-208ENST00000533244 DCTN1Q14203 1278 aa27.07■■□□□ 1.92
CCS-208ENST00000533244 RC3H1Q5TC82 1133 aaKnown RBP27.07■■□□□ 1.92
CCS-208ENST00000533244 ADAMTS8Q9UP79 889 aa27.07■■□□□ 1.92
CCS-208ENST00000533244 MYH14Q7Z406 1995 aaKnown RBP27.07■■□□□ 1.92
CCS-208ENST00000533244 SSFA2P28290 1259 aa27.07■■□□□ 1.92
CCS-208ENST00000533244 ZNF790Q6PG37 636 aa27.06■■□□□ 1.92
CCS-208ENST00000533244 VSIG10Q8N0Z9 540 aa27.06■■□□□ 1.92
CCS-208ENST00000533244 ATF5Q9Y2D1 282 aaPredicted RBP27.06■■□□□ 1.92
CCS-208ENST00000533244 CCDC184Q52MB2 194 aa27.05■■□□□ 1.92
CCS-208ENST00000533244 GNPATO15228 680 aa27.04■■□□□ 1.92
CCS-208ENST00000533244 TTC5Q8N0Z6 440 aa27.04■■□□□ 1.92
CCS-208ENST00000533244 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.03■■□□□ 1.92
CCS-208ENST00000533244 RUNDC1Q96C34 613 aa27.03■■□□□ 1.92
CCS-208ENST00000533244 BTBD11A6QL63 1104 aa27.02■■□□□ 1.92
CCS-208ENST00000533244 TMPOP42166 694 aaKnown RBP27.02■■□□□ 1.92
CCS-208ENST00000533244 DNAJC10Q8IXB1 793 aa27.02■■□□□ 1.92
CCS-208ENST00000533244 ZNF496Q96IT1 587 aaPredicted RBP27.02■■□□□ 1.92
CCS-208ENST00000533244 CRKLP46109 303 aaKnown RBP27.01■■□□□ 1.91
CCS-208ENST00000533244 SMIM5Q71RC9 77 aa27.01■■□□□ 1.91
CCS-208ENST00000533244 CCDC146Q8IYE0 955 aa27.01■■□□□ 1.91
CCS-208ENST00000533244 HEG1Q9ULI3 1381 aa27.01■■□□□ 1.91
CCS-208ENST00000533244 RPS6KA4O75676 772 aa26.99■■□□□ 1.91
CCS-208ENST00000533244 PHF14O94880 888 aa26.99■■□□□ 1.91
CCS-208ENST00000533244 MSH5O43196 834 aa26.99■■□□□ 1.91
CCS-208ENST00000533244 KCNQ3O43525 872 aa26.99■■□□□ 1.91
CCS-208ENST00000533244 CYP19A1P11511 503 aaPredicted RBP26.99■■□□□ 1.91
CCS-208ENST00000533244 RIPK4P57078 832 aa26.99■■□□□ 1.91
CCS-208ENST00000533244 TAF7Q15545 349 aaPredicted RBP26.99■■□□□ 1.91
CCS-208ENST00000533244 RTCBQ9Y3I0 505 aaKnown RBP26.99■■□□□ 1.91
CCS-208ENST00000533244 KDM3BQ7LBC6 1761 aa26.98■■□□□ 1.91
CCS-208ENST00000533244 ADRA2BP18089 450 aa26.98■■□□□ 1.91
CCS-208ENST00000533244 INTS5Q6P9B9 1019 aaKnown RBP26.98■■□□□ 1.91
CCS-208ENST00000533244 FMNL2Q96PY5 1086 aa26.98■■□□□ 1.91
CCS-208ENST00000533244 THUMPD2Q9BTF0 503 aaKnown RBP26.97■■□□□ 1.91
CCS-208ENST00000533244 C4AP0C0L4 1744 aa26.96■■□□□ 1.91
CCS-208ENST00000533244 PPP1R1BQ9UD71 204 aaPredicted RBP26.96■■□□□ 1.91
CCS-208ENST00000533244 LMOD3Q0VAK6 560 aa26.95■■□□□ 1.9
CCS-208ENST00000533244 CCDC87Q9NVE4 849 aa26.95■■□□□ 1.9
CCS-208ENST00000533244 TRAPPC3LQ5T215 181 aa26.94■■□□□ 1.9
CCS-208ENST00000533244 PNISRQ8TF01 805 aaKnown RBP26.94■■□□□ 1.9
CCS-208ENST00000533244 ARHGEF1Q92888 912 aaKnown RBP26.93■■□□□ 1.9
CCS-208ENST00000533244 TEX13AQ9BXU3 409 aaPredicted RBP26.93■■□□□ 1.9
CCS-208ENST00000533244 MRS2Q9HD23 443 aa26.93■■□□□ 1.9
CCS-208ENST00000533244 RRP7AQ9Y3A4 280 aaKnown RBP26.93■■□□□ 1.9
CCS-208ENST00000533244 ARXQ96QS3 562 aa26.92■■□□□ 1.9
CCS-208ENST00000533244 SOS1Q07889 1333 aaPredicted RBP26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms