RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 SLC27A3Q5K4L6 730 aa15.87■□□□□ 0.13
SSBP3-214ENST00000533209 RUNDC1Q96C34 613 aa15.87■□□□□ 0.13
SSBP3-214ENST00000533209 NUP188Q5SRE5 1749 aa15.87■□□□□ 0.13
SSBP3-214ENST00000533209 ANO8Q9HCE9 1232 aaPredicted RBP15.86■□□□□ 0.13
SSBP3-214ENST00000533209 DCTN1Q14203 1278 aa15.85■□□□□ 0.13
SSBP3-214ENST00000533209 DIEXFQ68CQ4 756 aaKnown RBP15.85■□□□□ 0.13
SSBP3-214ENST00000533209 MCM10Q7L590 875 aa15.85■□□□□ 0.13
SSBP3-214ENST00000533209 RTF1Q92541 710 aaKnown RBP15.85■□□□□ 0.13
SSBP3-214ENST00000533209 CCNL1Q9UK58 526 aaPredicted RBP15.85■□□□□ 0.13
SSBP3-214ENST00000533209 LY75O60449 1722 aa15.85■□□□□ 0.13
SSBP3-214ENST00000533209 TMPOP42166 694 aaKnown RBP15.84■□□□□ 0.13
SSBP3-214ENST00000533209 TEFQ10587 303 aa15.84■□□□□ 0.13
SSBP3-214ENST00000533209 NBPF14Q5TI25 921 aa15.84■□□□□ 0.13
SSBP3-214ENST00000533209 LOC102724428A0A0B4J2F2 783 aa15.83■□□□□ 0.12
SSBP3-214ENST00000533209 SIK1P57059 783 aa15.83■□□□□ 0.12
SSBP3-214ENST00000533209 RIPK4P57078 832 aa15.83■□□□□ 0.12
SSBP3-214ENST00000533209 SLC4A9Q96Q91 983 aa15.83■□□□□ 0.12
SSBP3-214ENST00000533209 PAPPAQ13219 1627 aa15.83■□□□□ 0.12
SSBP3-214ENST00000533209 SLC39A6Q13433 755 aa15.82■□□□□ 0.12
SSBP3-214ENST00000533209 R3HDM1Q15032 1099 aaKnown RBP15.82■□□□□ 0.12
SSBP3-214ENST00000533209 RRP7AQ9Y3A4 280 aaKnown RBP15.82■□□□□ 0.12
SSBP3-214ENST00000533209 PSDA5PKW4 1024 aaPredicted RBP15.81■□□□□ 0.12
SSBP3-214ENST00000533209 ZNF827Q17R98 1081 aa15.81■□□□□ 0.12
SSBP3-214ENST00000533209 RBM42Q9BTD8 480 aaKnown RBP15.81■□□□□ 0.12
SSBP3-214ENST00000533209 THUMPD2Q9BTF0 503 aaKnown RBP15.81■□□□□ 0.12
SSBP3-214ENST00000533209 APAF1O14727 1248 aa15.8■□□□□ 0.12
SSBP3-214ENST00000533209 PTCD1O75127 700 aaKnown RBP15.8■□□□□ 0.12
SSBP3-214ENST00000533209 ITPK1Q13572 414 aa15.8■□□□□ 0.12
SSBP3-214ENST00000533209 NEUROD2Q15784 382 aa15.8■□□□□ 0.12
SSBP3-214ENST00000533209 SLC15A2Q16348 729 aa15.8■□□□□ 0.12
SSBP3-214ENST00000533209 AKT1S1Q96B36 256 aa15.8■□□□□ 0.12
SSBP3-214ENST00000533209 STK32BQ9NY57 414 aa15.8■□□□□ 0.12
SSBP3-214ENST00000533209 VIRMAQ69YN4 1812 aaKnown RBP15.8■□□□□ 0.12
SSBP3-214ENST00000533209 ATP6V1AP38606 617 aa15.79■□□□□ 0.12
SSBP3-214ENST00000533209 TRIM35Q9UPQ4 493 aa15.79■□□□□ 0.12
SSBP3-214ENST00000533209 DLG5Q8TDM6 1919 aa15.78■□□□□ 0.12
SSBP3-214ENST00000533209 SIPA1L3O60292 1781 aaPredicted RBP15.78■□□□□ 0.12
SSBP3-214ENST00000533209 BTBD11A6QL63 1104 aa15.78■□□□□ 0.12
SSBP3-214ENST00000533209 CCER2I3L3R5 266 aa15.78■□□□□ 0.12
SSBP3-214ENST00000533209 LMOD3Q0VAK6 560 aa15.78■□□□□ 0.12
SSBP3-214ENST00000533209 TAF7Q15545 349 aaPredicted RBP15.78■□□□□ 0.12
SSBP3-214ENST00000533209 ZNF790Q6PG37 636 aa15.78■□□□□ 0.12
SSBP3-214ENST00000533209 LINC00116Q8NCU8 138 aa15.78■□□□□ 0.12
SSBP3-214ENST00000533209 KCPQ6ZWJ8 1503 aa15.78■□□□□ 0.12
SSBP3-214ENST00000533209 KCNQ3O43525 872 aa15.77■□□□□ 0.12
SSBP3-214ENST00000533209 FAM9BQ8IZU0 186 aa15.77■□□□□ 0.12
SSBP3-214ENST00000533209 HMGB2P26583 209 aaKnown RBP15.76■□□□□ 0.11
SSBP3-214ENST00000533209 TTC5Q8N0Z6 440 aa15.76■□□□□ 0.11
SSBP3-214ENST00000533209 MIER1Q8N108 512 aa15.76■□□□□ 0.11
SSBP3-214ENST00000533209 ZNF831Q5JPB2 1677 aa15.76■□□□□ 0.11
SSBP3-214ENST00000533209 ZNF496Q96IT1 587 aaPredicted RBP15.75■□□□□ 0.11
SSBP3-214ENST00000533209 MIS18AQ9NYP9 233 aa15.75■□□□□ 0.11
SSBP3-214ENST00000533209 C5P01031 1676 aa15.75■□□□□ 0.11
SSBP3-214ENST00000533209 VSIG10Q8N0Z9 540 aa15.74■□□□□ 0.11
SSBP3-214ENST00000533209 PDGFDQ9GZP0 370 aaPredicted RBP15.74■□□□□ 0.11
SSBP3-214ENST00000533209 TFCP2L1Q9NZI6 479 aa15.74■□□□□ 0.11
SSBP3-214ENST00000533209 TAF1LQ8IZX4 1826 aa15.73■□□□□ 0.11
SSBP3-214ENST00000533209 UBR2Q8IWV8 1755 aa15.73■□□□□ 0.11
SSBP3-214ENST00000533209 AMIGO3Q86WK7 504 aa15.73■□□□□ 0.11
SSBP3-214ENST00000533209 DNAJC10Q8IXB1 793 aa15.73■□□□□ 0.11
SSBP3-214ENST00000533209 FMNL2Q96PY5 1086 aa15.73■□□□□ 0.11
SSBP3-214ENST00000533209 C4BP0C0L5 1744 aa15.73■□□□□ 0.11
SSBP3-214ENST00000533209 HEG1Q9ULI3 1381 aa15.73■□□□□ 0.11
SSBP3-214ENST00000533209 CICQ96RK0 1608 aaPredicted RBP15.72■□□□□ 0.11
SSBP3-214ENST00000533209 PNPLA7Q6ZV29 1317 aa15.72■□□□□ 0.11
SSBP3-214ENST00000533209 SENP3-EIF4A1A0A087X0R7 540 aa15.72■□□□□ 0.11
SSBP3-214ENST00000533209 RC3H1Q5TC82 1133 aaKnown RBP15.72■□□□□ 0.11
SSBP3-214ENST00000533209 AK7Q96M32 723 aa15.72■□□□□ 0.11
SSBP3-214ENST00000533209 TJP1Q07157 1748 aa15.71■□□□□ 0.11
SSBP3-214ENST00000533209 CNTNAP4Q9C0A0 1308 aa15.71■□□□□ 0.11
SSBP3-214ENST00000533209 CYP19A1P11511 503 aaPredicted RBP15.71■□□□□ 0.11
SSBP3-214ENST00000533209 CRKLP46109 303 aaKnown RBP15.71■□□□□ 0.11
SSBP3-214ENST00000533209 BABAM1Q9NWV8 329 aa15.71■□□□□ 0.11
SSBP3-214ENST00000533209 CHL1O00533 1208 aa15.7■□□□□ 0.1
SSBP3-214ENST00000533209 GNPATO15228 680 aa15.7■□□□□ 0.1
SSBP3-214ENST00000533209 EIF4A1P60842 406 aaKnown RBP15.7■□□□□ 0.1
SSBP3-214ENST00000533209 CCDC27Q2M243 656 aa15.7■□□□□ 0.1
SSBP3-214ENST00000533209 NCBP3Q53F19 620 aaKnown RBP15.7■□□□□ 0.1
SSBP3-214ENST00000533209 SMIM5Q71RC9 77 aa15.7■□□□□ 0.1
SSBP3-214ENST00000533209 COL5A3P25940 1745 aaPredicted RBP15.69■□□□□ 0.1
SSBP3-214ENST00000533209 INTS5Q6P9B9 1019 aaKnown RBP15.69■□□□□ 0.1
SSBP3-214ENST00000533209 COL23A1Q86Y22 540 aaPredicted RBP15.69■□□□□ 0.1
SSBP3-214ENST00000533209 TSPYL4Q9UJ04 414 aa15.69■□□□□ 0.1
SSBP3-214ENST00000533209 CASZ1Q86V15 1759 aa15.69■□□□□ 0.1
SSBP3-214ENST00000533209 KDM3BQ7LBC6 1761 aa15.68■□□□□ 0.1
SSBP3-214ENST00000533209 PRAMEF22A3QJZ6 481 aa15.68■□□□□ 0.1
SSBP3-214ENST00000533209 RPS6KA4O75676 772 aa15.68■□□□□ 0.1
SSBP3-214ENST00000533209 SNRPA1P09661 255 aaKnown RBP15.68■□□□□ 0.1
SSBP3-214ENST00000533209 SSFA2P28290 1259 aa15.68■□□□□ 0.1
SSBP3-214ENST00000533209 WWC1Q8IX03 1113 aa15.68■□□□□ 0.1
SSBP3-214ENST00000533209 FLAD1Q8NFF5 587 aa15.68■□□□□ 0.1
SSBP3-214ENST00000533209 TEX13AQ9BXU3 409 aaPredicted RBP15.68■□□□□ 0.1
SSBP3-214ENST00000533209 CCDC87Q9NVE4 849 aa15.68■□□□□ 0.1
SSBP3-214ENST00000533209 SRCAPQ6ZRS2 3230 aa15.68■□□□□ 0.1
SSBP3-214ENST00000533209 TUBGCP6Q96RT7 1819 aa15.68■□□□□ 0.1
SSBP3-214ENST00000533209 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.67■□□□□ 0.1
SSBP3-214ENST00000533209 PHF14O94880 888 aa15.67■□□□□ 0.1
SSBP3-214ENST00000533209 STARD3NLO95772 234 aa15.67■□□□□ 0.1
SSBP3-214ENST00000533209 ZNF853P0CG23 659 aa15.67■□□□□ 0.1
SSBP3-214ENST00000533209 CFAP44Q96MT7 982 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 232.5 ms