RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 NSD3Q9BZ95 1437 aa18.01■□□□□ 0.47
COPB1-209ENST00000533096 TGFB2P61812 414 aa18.01■□□□□ 0.47
COPB1-209ENST00000533096 ADCY9O60503 1353 aa18.01■□□□□ 0.47
COPB1-209ENST00000533096 GOLGB1Q14789 3259 aaKnown RBP18.01■□□□□ 0.47
COPB1-209ENST00000533096 CABP4P57796 275 aa18■□□□□ 0.47
COPB1-209ENST00000533096 EIF4A2Q14240 407 aaKnown RBP18■□□□□ 0.47
COPB1-209ENST00000533096 SLC4A9Q96Q91 983 aa18■□□□□ 0.47
COPB1-209ENST00000533096 CCDC87Q9NVE4 849 aa18■□□□□ 0.47
COPB1-209ENST00000533096 PARP3Q9Y6F1 533 aa18■□□□□ 0.47
COPB1-209ENST00000533096 C4BP0C0L5 1744 aa17.98■□□□□ 0.47
COPB1-209ENST00000533096 PTCD1O75127 700 aaKnown RBP17.98■□□□□ 0.47
COPB1-209ENST00000533096 TOMM70O94826 608 aa17.98■□□□□ 0.47
COPB1-209ENST00000533096 APLP1P51693 650 aa17.98■□□□□ 0.47
COPB1-209ENST00000533096 NMRK2Q9NPI5 230 aa17.98■□□□□ 0.47
COPB1-209ENST00000533096 C5P01031 1676 aa17.97■□□□□ 0.47
COPB1-209ENST00000533096 ERVV-2B6SEH9 535 aa17.97■□□□□ 0.47
COPB1-209ENST00000533096 PLEKHO1Q53GL0 409 aaPredicted RBP17.97■□□□□ 0.47
COPB1-209ENST00000533096 RPS6KA4O75676 772 aa17.96■□□□□ 0.47
COPB1-209ENST00000533096 GYS1P13807 737 aa17.96■□□□□ 0.47
COPB1-209ENST00000533096 C9orf131Q5VYM1 1079 aa17.96■□□□□ 0.47
COPB1-209ENST00000533096 MTHFSP49914 203 aa17.95■□□□□ 0.46
COPB1-209ENST00000533096 RC3H1Q5TC82 1133 aaKnown RBP17.95■□□□□ 0.46
COPB1-209ENST00000533096 ZNF530Q6P9A1 599 aaPredicted RBP17.95■□□□□ 0.46
COPB1-209ENST00000533096 C16orf71Q8IYS4 520 aaPredicted RBP17.95■□□□□ 0.46
COPB1-209ENST00000533096 DCAF5Q96JK2 942 aa17.95■□□□□ 0.46
COPB1-209ENST00000533096 HSP90AB1P08238 724 aaKnown RBP17.94■□□□□ 0.46
COPB1-209ENST00000533096 NFATC2IPQ8NCF5 419 aa17.94■□□□□ 0.46
COPB1-209ENST00000533096 SRP68Q9UHB9 627 aaKnown RBP17.94■□□□□ 0.46
COPB1-209ENST00000533096 HTRA3P83110 453 aa17.93■□□□□ 0.46
COPB1-209ENST00000533096 DNAJC5GQ8N7S2 189 aa17.93■□□□□ 0.46
COPB1-209ENST00000533096 PIM2Q9P1W9 311 aa17.93■□□□□ 0.46
COPB1-209ENST00000533096 ADRA2BP18089 450 aa17.92■□□□□ 0.46
COPB1-209ENST00000533096 KCNA3P22001 575 aa17.92■□□□□ 0.46
COPB1-209ENST00000533096 PXDNLA1KZ92 1463 aa17.92■□□□□ 0.46
COPB1-209ENST00000533096 FKBP8Q14318 412 aa17.91■□□□□ 0.46
COPB1-209ENST00000533096 DALRD3Q5D0E6 543 aaKnown RBP17.91■□□□□ 0.46
COPB1-209ENST00000533096 C1orf141Q5JVX7 400 aa17.91■□□□□ 0.46
COPB1-209ENST00000533096 RRAGCQ9HB90 399 aa17.91■□□□□ 0.46
COPB1-209ENST00000533096 CEP350Q5VT06 3117 aa17.9■□□□□ 0.46
COPB1-209ENST00000533096 CHRNA5P30532 468 aa17.9■□□□□ 0.46
COPB1-209ENST00000533096 CRKLP46109 303 aaKnown RBP17.9■□□□□ 0.46
COPB1-209ENST00000533096 AMOTQ4VCS5 1084 aa17.9■□□□□ 0.46
COPB1-209ENST00000533096 PANK3Q9H999 370 aa17.9■□□□□ 0.46
COPB1-209ENST00000533096 AEBP1Q8IUX7 1158 aa17.89■□□□□ 0.45
COPB1-209ENST00000533096 RNF181Q9P0P0 153 aa17.89■□□□□ 0.45
COPB1-209ENST00000533096 CNTNAP4Q9C0A0 1308 aa17.89■□□□□ 0.45
COPB1-209ENST00000533096 MORC1Q86VD1 984 aa17.88■□□□□ 0.45
COPB1-209ENST00000533096 TOGARAM1Q9Y4F4 1720 aa17.88■□□□□ 0.45
COPB1-209ENST00000533096 NCAPD2Q15021 1401 aa17.88■□□□□ 0.45
COPB1-209ENST00000533096 SULT6B1Q6IMI4 303 aa17.87■□□□□ 0.45
COPB1-209ENST00000533096 DDR1Q08345 913 aa17.86■□□□□ 0.45
COPB1-209ENST00000533096 RBM46Q8TBY0 533 aaKnown RBP17.86■□□□□ 0.45
COPB1-209ENST00000533096 TAF1LQ8IZX4 1826 aa17.86■□□□□ 0.45
COPB1-209ENST00000533096 ZPR1O75312 459 aa17.85■□□□□ 0.45
COPB1-209ENST00000533096 KDRP35968 1356 aa17.85■□□□□ 0.45
COPB1-209ENST00000533096 KDM2BQ8NHM5 1336 aa17.85■□□□□ 0.45
COPB1-209ENST00000533096 CICQ96RK0 1608 aaPredicted RBP17.85■□□□□ 0.45
COPB1-209ENST00000533096 PCGF6Q9BYE7 350 aa17.85■□□□□ 0.45
COPB1-209ENST00000533096 ITGB4P16144 1822 aa17.84■□□□□ 0.45
COPB1-209ENST00000533096 C10orf71Q711Q0 1435 aa17.84■□□□□ 0.45
COPB1-209ENST00000533096 CAPN15O75808 1086 aa17.84■□□□□ 0.45
COPB1-209ENST00000533096 TRIM26Q12899 539 aaPredicted RBP17.84■□□□□ 0.45
COPB1-209ENST00000533096 INTS5Q6P9B9 1019 aaKnown RBP17.84■□□□□ 0.45
COPB1-209ENST00000533096 UBR3Q6ZT12 1888 aa17.84■□□□□ 0.45
COPB1-209ENST00000533096 USPL1Q5W0Q7 1092 aa17.83■□□□□ 0.44
COPB1-209ENST00000533096 DNAJC10Q8IXB1 793 aa17.83■□□□□ 0.44
COPB1-209ENST00000533096 USP42Q9H9J4 1324 aaKnown RBP17.82■□□□□ 0.44
COPB1-209ENST00000533096 TM4SF1P30408 202 aa17.82■□□□□ 0.44
COPB1-209ENST00000533096 LGR6Q9HBX8 967 aa17.82■□□□□ 0.44
COPB1-209ENST00000533096 FSTL1Q12841 308 aa17.81■□□□□ 0.44
COPB1-209ENST00000533096 COL13A1Q5TAT6 717 aaPredicted RBP17.81■□□□□ 0.44
COPB1-209ENST00000533096 KLRG1Q96E93 195 aa17.81■□□□□ 0.44
COPB1-209ENST00000533096 MAP2P11137 1827 aaKnown RBP17.81■□□□□ 0.44
COPB1-209ENST00000533096 PKD1L3Q7Z443 1732 aa17.81■□□□□ 0.44
COPB1-209ENST00000533096 KDM6AO15550 1401 aaPredicted RBP17.81■□□□□ 0.44
COPB1-209ENST00000533096 KIF20BQ96Q89 1820 aa17.8■□□□□ 0.44
COPB1-209ENST00000533096 POLRMTO00411 1230 aaKnown RBP17.8■□□□□ 0.44
COPB1-209ENST00000533096 SLC39A6Q13433 755 aa17.8■□□□□ 0.44
COPB1-209ENST00000533096 HSPA5P11021 654 aaKnown RBP17.79■□□□□ 0.44
COPB1-209ENST00000533096 RASSF7Q02833 373 aa17.79■□□□□ 0.44
COPB1-209ENST00000533096 TIMELESSQ9UNS1 1208 aa17.79■□□□□ 0.44
COPB1-209ENST00000533096 EIF4G2P78344 907 aaKnown RBP eCLIP17.78■□□□□ 0.44
COPB1-209ENST00000533096 BICDL1Q6ZP65 573 aa17.78■□□□□ 0.44
COPB1-209ENST00000533096 KCPQ6ZWJ8 1503 aa17.77■□□□□ 0.44
COPB1-209ENST00000533096 HMOX1P09601 288 aa17.77■□□□□ 0.44
COPB1-209ENST00000533096 CANXP27824 592 aaKnown RBP17.77■□□□□ 0.44
COPB1-209ENST00000533096 IL13P35225 146 aa17.77■□□□□ 0.44
COPB1-209ENST00000533096 NFIXQ14938 502 aa17.77■□□□□ 0.44
COPB1-209ENST00000533096 ZNF219Q9P2Y4 722 aaPredicted RBP17.77■□□□□ 0.44
COPB1-209ENST00000533096 KNSTRNQ9Y448 316 aa17.77■□□□□ 0.44
COPB1-209ENST00000533096 N4BP2Q86UW6 1770 aaPredicted RBP17.76■□□□□ 0.43
COPB1-209ENST00000533096 SERPINB2P05120 415 aa17.76■□□□□ 0.43
COPB1-209ENST00000533096 CYP19A1P11511 503 aaPredicted RBP17.76■□□□□ 0.43
COPB1-209ENST00000533096 AKAP4Q5JQC9 854 aa17.76■□□□□ 0.43
COPB1-209ENST00000533096 SMC1BQ8NDV3 1235 aa17.76■□□□□ 0.43
COPB1-209ENST00000533096 SLC52A2Q9HAB3 445 aa17.76■□□□□ 0.43
COPB1-209ENST00000533096 PLEKHG2Q9H7P9 1386 aa17.76■□□□□ 0.43
COPB1-209ENST00000533096 CNGB1Q14028 1251 aaPredicted RBP17.75■□□□□ 0.43
COPB1-209ENST00000533096 C2CD5Q86YS7 1000 aa17.75■□□□□ 0.43
COPB1-209ENST00000533096 RNMTO43148 476 aaKnown RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms