RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 FMNL3Q8IVF7 1028 aa8.18□□□□□ -1.1
TGFBR3-210ENST00000533089 CLNS1AP54105 237 aaKnown RBP8.18□□□□□ -1.1
TGFBR3-210ENST00000533089 SAFBQ15424 915 aaKnown RBP eCLIP8.18□□□□□ -1.1
TGFBR3-210ENST00000533089 RALYLQ86SE5 291 aaKnown RBP8.18□□□□□ -1.1
TGFBR3-210ENST00000533089 PDILTQ8N807 584 aa8.18□□□□□ -1.1
TGFBR3-210ENST00000533089 TCHPQ9BT92 498 aa8.18□□□□□ -1.1
TGFBR3-210ENST00000533089 ZNF853P0CG23 659 aa8.18□□□□□ -1.1
TGFBR3-210ENST00000533089 MCM5P33992 734 aa8.18□□□□□ -1.1
TGFBR3-210ENST00000533089 FAM177A1Q8N128 213 aaPredicted RBP8.18□□□□□ -1.1
TGFBR3-210ENST00000533089 ZNF428Q96B54 188 aa8.18□□□□□ -1.1
TGFBR3-210ENST00000533089 BIRC2Q13490 618 aa8.18□□□□□ -1.1
TGFBR3-210ENST00000533089 KIF6Q6ZMV9 814 aa8.18□□□□□ -1.1
TGFBR3-210ENST00000533089 FILIP1Q7Z7B0 1213 aa8.18□□□□□ -1.1
TGFBR3-210ENST00000533089 VPS37CA5D8V6 355 aaPredicted RBP8.18□□□□□ -1.1
TGFBR3-210ENST00000533089 EPS15P42566 896 aa8.18□□□□□ -1.1
TGFBR3-210ENST00000533089 ANKRD18AQ8IVF6 992 aa8.18□□□□□ -1.1
TGFBR3-210ENST00000533089 REC8O95072 547 aa8.17□□□□□ -1.1
TGFBR3-210ENST00000533089 KIF4AO95239 1232 aa8.17□□□□□ -1.1
TGFBR3-210ENST00000533089 WWC2Q6AWC2 1192 aa8.17□□□□□ -1.1
TGFBR3-210ENST00000533089 API5Q9BZZ5 524 aaKnown RBP8.17□□□□□ -1.1
TGFBR3-210ENST00000533089 CHMP4BP1P59074 171 aa8.17□□□□□ -1.1
TGFBR3-210ENST00000533089 SEPT14Q6ZU15 432 aa8.17□□□□□ -1.1
TGFBR3-210ENST00000533089 ZNHIT6Q9NWK9 470 aaKnown RBP8.17□□□□□ -1.1
TGFBR3-210ENST00000533089 LOC102724159A0A0B4J2E5 919 aa8.17□□□□□ -1.1
TGFBR3-210ENST00000533089 KIF2AO00139 706 aaPredicted RBP8.17□□□□□ -1.1
TGFBR3-210ENST00000533089 GCKP35557 465 aa8.17□□□□□ -1.1
TGFBR3-210ENST00000533089 PWP2Q15269 919 aaKnown RBP8.17□□□□□ -1.1
TGFBR3-210ENST00000533089 FEZ1Q99689 392 aa8.16□□□□□ -1.1
TGFBR3-210ENST00000533089 BRMS1Q9HCU9 246 aa8.16□□□□□ -1.1
TGFBR3-210ENST00000533089 DDX19BQ9UMR2 479 aa8.16□□□□□ -1.1
TGFBR3-210ENST00000533089 CHD1O14646 1710 aa8.16□□□□□ -1.1
TGFBR3-210ENST00000533089 ERC2O15083 957 aa8.16□□□□□ -1.1
TGFBR3-210ENST00000533089 DBN1Q16643 649 aa8.16□□□□□ -1.1
TGFBR3-210ENST00000533089 ABTB2Q8N961 1025 aa8.16□□□□□ -1.1
TGFBR3-210ENST00000533089 RSRC1Q96IZ7 334 aaKnown RBP8.16□□□□□ -1.1
TGFBR3-210ENST00000533089 C16orf45Q96MC5 204 aaPredicted RBP8.16□□□□□ -1.1
TGFBR3-210ENST00000533089 ATP2B2Q01814 1243 aa8.16□□□□□ -1.1
TGFBR3-210ENST00000533089 SEPT6Q14141 434 aa8.16□□□□□ -1.1
TGFBR3-210ENST00000533089 MRFAP1L1Q96HT8 127 aa8.16□□□□□ -1.1
TGFBR3-210ENST00000533089 CDK19Q9BWU1 502 aa8.16□□□□□ -1.1
TGFBR3-210ENST00000533089 CFAP43Q8NDM7 1665 aa8.16□□□□□ -1.1
TGFBR3-210ENST00000533089 SMC2O95347 1197 aa8.16□□□□□ -1.1
TGFBR3-210ENST00000533089 U2AF2P26368 475 aaKnown RBP eCLIP8.16□□□□□ -1.17e-7■■■□□ 17
TGFBR3-210ENST00000533089 GABPB1Q06547 395 aaPredicted RBP8.16□□□□□ -1.1
TGFBR3-210ENST00000533089 PTPN14Q15678 1187 aa8.16□□□□□ -1.1
TGFBR3-210ENST00000533089 WDR63Q8IWG1 891 aa8.16□□□□□ -1.1
TGFBR3-210ENST00000533089 CCDC7Q96M83 1385 aa8.15□□□□□ -1.1
TGFBR3-210ENST00000533089 TTC16Q8NEE8 873 aa8.15□□□□□ -1.1
TGFBR3-210ENST00000533089 GGNBP2Q9H3C7 697 aa8.15□□□□□ -1.1
TGFBR3-210ENST00000533089 MAPKBP1O60336 1514 aa8.15□□□□□ -1.1
TGFBR3-210ENST00000533089 CFAP74Q9C0B2 1584 aa8.15□□□□□ -1.1
TGFBR3-210ENST00000533089 HSP90AB4PQ58FF6 505 aa8.15□□□□□ -1.1
TGFBR3-210ENST00000533089 DZIP1LQ8IYY4 767 aaKnown RBP8.15□□□□□ -1.1
TGFBR3-210ENST00000533089 RPUSD2Q8IZ73 545 aaKnown RBP8.15□□□□□ -1.1
TGFBR3-210ENST00000533089 ZFYVE16Q7Z3T8 1539 aa8.15□□□□□ -1.1
TGFBR3-210ENST00000533089 SCLT1Q96NL6 688 aa8.15□□□□□ -1.11
TGFBR3-210ENST00000533089 SMC3Q9UQE7 1217 aa8.15□□□□□ -1.11
TGFBR3-210ENST00000533089 KIF7Q2M1P5 1343 aa8.15□□□□□ -1.11
TGFBR3-210ENST00000533089 ATP7AQ04656 1500 aa8.15□□□□□ -1.11
TGFBR3-210ENST00000533089 ZMYM3Q14202 1370 aa8.15□□□□□ -1.11
TGFBR3-210ENST00000533089 MAGI2Q86UL8 1455 aa8.15□□□□□ -1.11
TGFBR3-210ENST00000533089 SYCE3A1L190 88 aa8.14□□□□□ -1.11
TGFBR3-210ENST00000533089 UBTFL1P0CB47 393 aaPredicted RBP8.14□□□□□ -1.11
TGFBR3-210ENST00000533089 HSP90AB2PQ58FF8 381 aa8.14□□□□□ -1.11
TGFBR3-210ENST00000533089 TBC1D2BQ9UPU7 963 aa8.14□□□□□ -1.11
TGFBR3-210ENST00000533089 AMOTL2Q9Y2J4 779 aa8.14□□□□□ -1.11
TGFBR3-210ENST00000533089 ARMCX6Q7L4S7 300 aa8.14□□□□□ -1.11
TGFBR3-210ENST00000533089 LUZP1Q86V48 1076 aa8.14□□□□□ -1.11
TGFBR3-210ENST00000533089 RBM5P52756 815 aaKnown RBP eCLIP8.14□□□□□ -1.11
TGFBR3-210ENST00000533089 CFAP45Q9UL16 551 aa8.14□□□□□ -1.11
TGFBR3-210ENST00000533089 CAPN2P17655 700 aa8.14□□□□□ -1.11
TGFBR3-210ENST00000533089 GNAI1P63096 354 aa8.14□□□□□ -1.11
TGFBR3-210ENST00000533089 RBBP5Q15291 538 aaKnown RBP8.14□□□□□ -1.11
TGFBR3-210ENST00000533089 XBP1P17861 261 aa8.14□□□□□ -1.11
TGFBR3-210ENST00000533089 KIF18AQ8NI77 898 aa8.14□□□□□ -1.11
TGFBR3-210ENST00000533089 MIPOL1Q8TD10 442 aa8.13□□□□□ -1.11
TGFBR3-210ENST00000533089 EFCC1Q9HA90 598 aa8.13□□□□□ -1.11
TGFBR3-210ENST00000533089 NOS1P29475 1434 aa8.13□□□□□ -1.11
TGFBR3-210ENST00000533089 DDX54Q8TDD1 881 aaKnown RBP8.13□□□□□ -1.11
TGFBR3-210ENST00000533089 SMARCC1Q92922 1105 aaPredicted RBP8.13□□□□□ -1.11
TGFBR3-210ENST00000533089 NAT10Q9H0A0 1025 aaKnown RBP8.13□□□□□ -1.11
TGFBR3-210ENST00000533089 SPATS2LQ9NUQ6 558 aaKnown RBP8.13□□□□□ -1.11
TGFBR3-210ENST00000533089 CRACR2AQ9BSW2 395 aa8.13□□□□□ -1.11
TGFBR3-210ENST00000533089 CNNM1Q9NRU3 951 aa8.13□□□□□ -1.11
TGFBR3-210ENST00000533089 IRAK4Q9NWZ3 460 aa8.13□□□□□ -1.11
TGFBR3-210ENST00000533089 PEX19P40855 299 aa8.13□□□□□ -1.11
TGFBR3-210ENST00000533089 ANAPC15P60006 121 aa8.13□□□□□ -1.11
TGFBR3-210ENST00000533089 PPM1EQ8WY54 764 aa8.13□□□□□ -1.11
TGFBR3-210ENST00000533089 RUNDC1Q96C34 613 aa8.13□□□□□ -1.11
TGFBR3-210ENST00000533089 FSD1Q9BTV5 496 aa8.13□□□□□ -1.11
TGFBR3-210ENST00000533089 C14orf93Q9H972 538 aaKnown RBP8.13□□□□□ -1.11
TGFBR3-210ENST00000533089 UHRF1BP1Q6BDS2 1440 aa8.13□□□□□ -1.11
TGFBR3-210ENST00000533089 LRPPRCP42704 1394 aaKnown RBP8.13□□□□□ -1.11
TGFBR3-210ENST00000533089 NBPF8Q3BBV2 869 aa8.12□□□□□ -1.11
TGFBR3-210ENST00000533089 INTS3Q68E01 1043 aaKnown RBP8.12□□□□□ -1.11
TGFBR3-210ENST00000533089 CABP1Q9NZU7 370 aa8.12□□□□□ -1.11
TGFBR3-210ENST00000533089 CCDC61Q9Y6R9 512 aa8.12□□□□□ -1.11
TGFBR3-210ENST00000533089 SMG6Q86US8 1419 aaKnown RBP8.12□□□□□ -1.11
TGFBR3-210ENST00000533089 CCDC73Q6ZRK6 1079 aa8.12□□□□□ -1.11
TGFBR3-210ENST00000533089 CADPS2Q86UW7 1296 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 183.9 ms