RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 TJP1Q07157 1748 aa24.19■■□□□ 1.46
SMG1-203ENST00000532700 ADAMTS7Q9UKP4 1686 aa24.19■■□□□ 1.46
SMG1-203ENST00000532700 DCAF5Q96JK2 942 aa24.19■■□□□ 1.46
SMG1-203ENST00000532700 MSH5O43196 834 aa24.18■■□□□ 1.46
SMG1-203ENST00000532700 AMOTQ4VCS5 1084 aa24.17■■□□□ 1.46
SMG1-203ENST00000532700 MAP3K5Q99683 1374 aa24.16■■□□□ 1.46
SMG1-203ENST00000532700 ERVV-2B6SEH9 535 aa24.16■■□□□ 1.46
SMG1-203ENST00000532700 PHF14O94880 888 aa24.16■■□□□ 1.46
SMG1-203ENST00000532700 MYH14Q7Z406 1995 aaKnown RBP24.16■■□□□ 1.46
SMG1-203ENST00000532700 ATP6V1AP38606 617 aa24.15■■□□□ 1.46
SMG1-203ENST00000532700 MRC1P22897 1456 aa24.14■■□□□ 1.46
SMG1-203ENST00000532700 DIAPH1O60610 1272 aaKnown RBP24.14■■□□□ 1.45
SMG1-203ENST00000532700 NLGN2Q8NFZ4 835 aa24.14■■□□□ 1.45
SMG1-203ENST00000532700 AK7Q96M32 723 aa24.14■■□□□ 1.45
SMG1-203ENST00000532700 CICQ96RK0 1608 aaPredicted RBP24.13■■□□□ 1.45
SMG1-203ENST00000532700 C4AP0C0L4 1744 aa24.13■■□□□ 1.45
SMG1-203ENST00000532700 KLHL34Q8N239 644 aa24.13■■□□□ 1.45
SMG1-203ENST00000532700 LGR6Q9HBX8 967 aa24.13■■□□□ 1.45
SMG1-203ENST00000532700 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.12■■□□□ 1.45
SMG1-203ENST00000532700 HSP90AB1P08238 724 aaKnown RBP24.12■■□□□ 1.45
SMG1-203ENST00000532700 CABP4P57796 275 aa24.12■■□□□ 1.45
SMG1-203ENST00000532700 MTHFSDQ2M296 383 aaKnown RBP24.12■■□□□ 1.45
SMG1-203ENST00000532700 C1orf141Q5JVX7 400 aa24.12■■□□□ 1.45
SMG1-203ENST00000532700 NFATC2IPQ8NCF5 419 aa24.12■■□□□ 1.45
SMG1-203ENST00000532700 RBM42Q9BTD8 480 aaKnown RBP24.11■■□□□ 1.45
SMG1-203ENST00000532700 POLD1P28340 1107 aa24.1■■□□□ 1.45
SMG1-203ENST00000532700 GNPATO15228 680 aa24.09■■□□□ 1.45
SMG1-203ENST00000532700 UTRNP46939 3433 aa24.08■■□□□ 1.45
SMG1-203ENST00000532700 AKAP4Q5JQC9 854 aa24.08■■□□□ 1.45
SMG1-203ENST00000532700 SIPA1L3O60292 1781 aaPredicted RBP24.08■■□□□ 1.44
SMG1-203ENST00000532700 UBR2Q8IWV8 1755 aa24.07■■□□□ 1.44
SMG1-203ENST00000532700 KCPQ6ZWJ8 1503 aa24.07■■□□□ 1.44
SMG1-203ENST00000532700 PTCD1O75127 700 aaKnown RBP24.07■■□□□ 1.44
SMG1-203ENST00000532700 U2SURPO15042 1029 aaKnown RBP24.06■■□□□ 1.44
SMG1-203ENST00000532700 RNMTO43148 476 aaKnown RBP24.06■■□□□ 1.44
SMG1-203ENST00000532700 PPP2R1AP30153 589 aa24.06■■□□□ 1.44
SMG1-203ENST00000532700 YY1P25490 414 aa24.05■■□□□ 1.44
SMG1-203ENST00000532700 SSFA2P28290 1259 aa24.05■■□□□ 1.44
SMG1-203ENST00000532700 FLAD1Q8NFF5 587 aa24.05■■□□□ 1.44
SMG1-203ENST00000532700 SLC52A2Q9HAB3 445 aa24.04■■□□□ 1.44
SMG1-203ENST00000532700 SLC39A6Q13433 755 aa24.03■■□□□ 1.44
SMG1-203ENST00000532700 KIAA1551Q9HCM1 1747 aa24.03■■□□□ 1.44
SMG1-203ENST00000532700 CHD4Q14839 1912 aa24.02■■□□□ 1.44
SMG1-203ENST00000532700 PHACTR3Q96KR7 559 aa24.02■■□□□ 1.44
SMG1-203ENST00000532700 CNTNAP4Q9C0A0 1308 aa24.01■■□□□ 1.43
SMG1-203ENST00000532700 RSPH6AQ9H0K4 717 aa24■■□□□ 1.43
SMG1-203ENST00000532700 YBX3P16989 372 aaKnown RBP eCLIP23.99■■□□□ 1.43
SMG1-203ENST00000532700 CRKLP46109 303 aaKnown RBP23.98■■□□□ 1.43
SMG1-203ENST00000532700 ARHGEF1Q92888 912 aaKnown RBP23.98■■□□□ 1.43
SMG1-203ENST00000532700 GOLGB1Q14789 3259 aaKnown RBP23.98■■□□□ 1.43
SMG1-203ENST00000532700 KIF13BQ9NQT8 1826 aa23.98■■□□□ 1.43
SMG1-203ENST00000532700 DCAF8L1A6NGE4 600 aa23.97■■□□□ 1.43
SMG1-203ENST00000532700 PRKAR2BP31323 418 aa23.97■■□□□ 1.43
SMG1-203ENST00000532700 RC3H1Q5TC82 1133 aaKnown RBP23.97■■□□□ 1.43
SMG1-203ENST00000532700 DNAJC10Q8IXB1 793 aa23.97■■□□□ 1.43
SMG1-203ENST00000532700 PELP1Q8IZL8 1130 aaKnown RBP23.97■■□□□ 1.43
SMG1-203ENST00000532700 IL17REQ8NFR9 667 aa23.97■■□□□ 1.43
SMG1-203ENST00000532700 INTS5Q6P9B9 1019 aaKnown RBP23.96■■□□□ 1.43
SMG1-203ENST00000532700 RTCBQ9Y3I0 505 aaKnown RBP23.96■■□□□ 1.43
SMG1-203ENST00000532700 RPS6KA4O75676 772 aa23.95■■□□□ 1.42
SMG1-203ENST00000532700 GPR162Q16538 588 aa23.95■■□□□ 1.42
SMG1-203ENST00000532700 N4BP2Q86UW6 1770 aaPredicted RBP23.95■■□□□ 1.42
SMG1-203ENST00000532700 SRP68Q9UHB9 627 aaKnown RBP23.94■■□□□ 1.42
SMG1-203ENST00000532700 WWC3Q9ULE0 1092 aa23.94■■□□□ 1.42
SMG1-203ENST00000532700 GYS1P13807 737 aa23.93■■□□□ 1.42
SMG1-203ENST00000532700 HMGB2P26583 209 aaKnown RBP23.93■■□□□ 1.42
SMG1-203ENST00000532700 TRAPPC3LQ5T215 181 aa23.93■■□□□ 1.42
SMG1-203ENST00000532700 MMP10P09238 476 aa23.92■■□□□ 1.42
SMG1-203ENST00000532700 CFAP53Q96M91 514 aa23.92■■□□□ 1.42
SMG1-203ENST00000532700 DLG5Q8TDM6 1919 aa23.92■■□□□ 1.42
SMG1-203ENST00000532700 CD2APQ9Y5K6 639 aa23.91■■□□□ 1.42
SMG1-203ENST00000532700 CEMIPQ8WUJ3 1361 aa23.91■■□□□ 1.42
SMG1-203ENST00000532700 GNAT3A8MTJ3 354 aa23.9■■□□□ 1.42
SMG1-203ENST00000532700 U2AF1L5P0DN76 240 aaPredicted RBP23.9■■□□□ 1.42
SMG1-203ENST00000532700 CYP19A1P11511 503 aaPredicted RBP23.9■■□□□ 1.42
SMG1-203ENST00000532700 U2AF1Q01081 240 aaKnown RBP eCLIP23.9■■□□□ 1.42
SMG1-203ENST00000532700 GAS2L2Q8NHY3 880 aa23.89■■□□□ 1.41
SMG1-203ENST00000532700 KCNQ3O43525 872 aa23.88■■□□□ 1.41
SMG1-203ENST00000532700 ADRA2BP18089 450 aa23.88■■□□□ 1.41
SMG1-203ENST00000532700 PXDNLA1KZ92 1463 aa23.87■■□□□ 1.41
SMG1-203ENST00000532700 USP42Q9H9J4 1324 aaKnown RBP23.87■■□□□ 1.41
SMG1-203ENST00000532700 C10orf71Q711Q0 1435 aa23.87■■□□□ 1.41
SMG1-203ENST00000532700 CCDC87Q9NVE4 849 aa23.87■■□□□ 1.41
SMG1-203ENST00000532700 ZBTB1Q9Y2K1 713 aa23.87■■□□□ 1.41
SMG1-203ENST00000532700 BRCA1P38398 1863 aaKnown RBP23.87■■□□□ 1.41
SMG1-203ENST00000532700 SOS1Q07889 1333 aaPredicted RBP23.86■■□□□ 1.41
SMG1-203ENST00000532700 RFC4P35249 363 aa23.86■■□□□ 1.41
SMG1-203ENST00000532700 FKBP8Q14318 412 aa23.86■■□□□ 1.41
SMG1-203ENST00000532700 ZNF784Q8NCA9 323 aaPredicted RBP23.86■■□□□ 1.41
SMG1-203ENST00000532700 ZNF496Q96IT1 587 aaPredicted RBP23.86■■□□□ 1.41
SMG1-203ENST00000532700 DDR1Q08345 913 aa23.85■■□□□ 1.41
SMG1-203ENST00000532700 AFDNP55196 1824 aaKnown RBP23.84■■□□□ 1.41
SMG1-203ENST00000532700 DCTN1Q14203 1278 aa23.84■■□□□ 1.41
SMG1-203ENST00000532700 MCM10Q7L590 875 aa23.84■■□□□ 1.41
SMG1-203ENST00000532700 NUDCQ9Y266 331 aa23.84■■□□□ 1.41
SMG1-203ENST00000532700 TEFQ10587 303 aa23.83■■□□□ 1.41
SMG1-203ENST00000532700 ZNF790Q6PG37 636 aa23.83■■□□□ 1.41
SMG1-203ENST00000532700 NLGN1Q8N2Q7 840 aa23.83■■□□□ 1.41
SMG1-203ENST00000532700 COL15A1P39059 1388 aa23.82■■□□□ 1.4
SMG1-203ENST00000532700 HEG1Q9ULI3 1381 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms