RNA–Protein interactions for RNA: ENST00000532268.1

SRPRA-207, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 829 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-207ENST00000532268 FANCIQ9NVI1 1328 aa12.37□□□□□ -0.43
SRPRA-207ENST00000532268 BTBD11A6QL63 1104 aa12.36□□□□□ -0.43
SRPRA-207ENST00000532268 NKX1-1Q15270 411 aaPredicted RBP12.36□□□□□ -0.43
SRPRA-207ENST00000532268 NFATC2IPQ8NCF5 419 aa12.36□□□□□ -0.43
SRPRA-207ENST00000532268 ACSBG1Q96GR2 724 aa12.36□□□□□ -0.43
SRPRA-207ENST00000532268 SLC52A2Q9HAB3 445 aa12.36□□□□□ -0.43
SRPRA-207ENST00000532268 MBIPQ9NS73 344 aa12.36□□□□□ -0.43
SRPRA-207ENST00000532268 TMOD3Q9NYL9 352 aa12.36□□□□□ -0.43
SRPRA-207ENST00000532268 THSD7AQ9UPZ6 1657 aa12.35□□□□□ -0.43
SRPRA-207ENST00000532268 CEMIPQ8WUJ3 1361 aa12.35□□□□□ -0.43
SRPRA-207ENST00000532268 ERVV-2B6SEH9 535 aa12.35□□□□□ -0.43
SRPRA-207ENST00000532268 FAM182BQ5T319 152 aa12.35□□□□□ -0.43
SRPRA-207ENST00000532268 SHANK3Q9BYB0 1731 aa12.34□□□□□ -0.43
SRPRA-207ENST00000532268 EXOSC9Q06265 439 aaKnown RBP12.34□□□□□ -0.43
SRPRA-207ENST00000532268 DUSP27Q5VZP5 1158 aa12.34□□□□□ -0.43
SRPRA-207ENST00000532268 TTC5Q8N0Z6 440 aa12.34□□□□□ -0.43
SRPRA-207ENST00000532268 CHL1O00533 1208 aa12.33□□□□□ -0.44
SRPRA-207ENST00000532268 ZNF853P0CG23 659 aa12.33□□□□□ -0.44
SRPRA-207ENST00000532268 ELL2O00472 640 aaPredicted RBP12.32□□□□□ -0.44
SRPRA-207ENST00000532268 PRIM1P49642 420 aaKnown RBP12.32□□□□□ -0.44
SRPRA-207ENST00000532268 SLC39A6Q13433 755 aa12.32□□□□□ -0.44
SRPRA-207ENST00000532268 BABAM1Q9NWV8 329 aa12.32□□□□□ -0.44
SRPRA-207ENST00000532268 SCN11AQ9UI33 1791 aa12.32□□□□□ -0.44
SRPRA-207ENST00000532268 FAM196AQ6ZSG2 479 aa12.31□□□□□ -0.44
SRPRA-207ENST00000532268 TRMT2AQ8IZ69 625 aaKnown RBP12.31□□□□□ -0.44
SRPRA-207ENST00000532268 KCNQ3O43525 872 aa12.3□□□□□ -0.44
SRPRA-207ENST00000532268 PIGBQ92521 554 aa12.3□□□□□ -0.44
SRPRA-207ENST00000532268 ADAMTS7Q9UKP4 1686 aa12.29□□□□□ -0.44
SRPRA-207ENST00000532268 MRC1P22897 1456 aa12.29□□□□□ -0.44
SRPRA-207ENST00000532268 DOT1LQ8TEK3 1739 aa12.29□□□□□ -0.44
SRPRA-207ENST00000532268 SF3B2Q13435 895 aaKnown RBP12.29□□□□□ -0.44
SRPRA-207ENST00000532268 KRT24Q2M2I5 525 aa12.29□□□□□ -0.44
SRPRA-207ENST00000532268 TWISTNBQ3B726 338 aaPredicted RBP12.29□□□□□ -0.44
SRPRA-207ENST00000532268 ZNF790Q6PG37 636 aa12.29□□□□□ -0.44
SRPRA-207ENST00000532268 C8orf58Q8NAV2 365 aa12.29□□□□□ -0.44
SRPRA-207ENST00000532268 RBM42Q9BTD8 480 aaKnown RBP12.29□□□□□ -0.44
SRPRA-207ENST00000532268 RCAN3Q9UKA8 241 aa12.29□□□□□ -0.44
SRPRA-207ENST00000532268 VIRMAQ69YN4 1812 aaKnown RBP12.29□□□□□ -0.44
SRPRA-207ENST00000532268 TOGARAM1Q9Y4F4 1720 aa12.28□□□□□ -0.44
SRPRA-207ENST00000532268 KCNQ2O43526 872 aa12.28□□□□□ -0.44
SRPRA-207ENST00000532268 PTCD1O75127 700 aaKnown RBP12.28□□□□□ -0.44
SRPRA-207ENST00000532268 EIF2S2P20042 333 aaKnown RBP12.27□□□□□ -0.45
SRPRA-207ENST00000532268 EIF4A1P60842 406 aaKnown RBP12.27□□□□□ -0.45
SRPRA-207ENST00000532268 TSPYL6Q8N831 410 aa12.27□□□□□ -0.45
SRPRA-207ENST00000532268 NECTIN2Q92692 538 aa12.27□□□□□ -0.45
SRPRA-207ENST00000532268 FMNL2Q96PY5 1086 aa12.27□□□□□ -0.45
SRPRA-207ENST00000532268 ASAP1Q9ULH1 1129 aa12.27□□□□□ -0.45
SRPRA-207ENST00000532268 BCL9O00512 1426 aa12.27□□□□□ -0.45
SRPRA-207ENST00000532268 SBF2Q86WG5 1849 aa12.26□□□□□ -0.45
SRPRA-207ENST00000532268 TCERG1O14776 1098 aaKnown RBP12.26□□□□□ -0.45
SRPRA-207ENST00000532268 CT47B1P0C2W7 299 aaPredicted RBP12.26□□□□□ -0.45
SRPRA-207ENST00000532268 CANXP27824 592 aaKnown RBP12.26□□□□□ -0.45
SRPRA-207ENST00000532268 ZNF496Q96IT1 587 aaPredicted RBP12.26□□□□□ -0.45
SRPRA-207ENST00000532268 ATG3Q9NT62 314 aa12.26□□□□□ -0.45
SRPRA-207ENST00000532268 TRIM37O94972 964 aa12.25□□□□□ -0.45
SRPRA-207ENST00000532268 SMARCC1Q92922 1105 aaPredicted RBP12.25□□□□□ -0.45
SRPRA-207ENST00000532268 BCL2L13Q9BXK5 485 aa12.25□□□□□ -0.45
SRPRA-207ENST00000532268 SMC4Q9NTJ3 1288 aa12.25□□□□□ -0.45
SRPRA-207ENST00000532268 SRCAPQ6ZRS2 3230 aa12.25□□□□□ -0.45
SRPRA-207ENST00000532268 SIPA1L3O60292 1781 aaPredicted RBP12.25□□□□□ -0.45
SRPRA-207ENST00000532268 KDM3BQ7LBC6 1761 aa12.25□□□□□ -0.45
SRPRA-207ENST00000532268 VAMP4O75379 141 aa12.24□□□□□ -0.45
SRPRA-207ENST00000532268 ITGB4P16144 1822 aa12.24□□□□□ -0.45
SRPRA-207ENST00000532268 BAG6P46379 1132 aa12.24□□□□□ -0.45
SRPRA-207ENST00000532268 HDGFL1Q5TGJ6 251 aa12.24□□□□□ -0.45
SRPRA-207ENST00000532268 STK31Q9BXU1 1019 aa12.24□□□□□ -0.45
SRPRA-207ENST00000532268 CHMP4AQ9BY43 222 aa12.24□□□□□ -0.45
SRPRA-207ENST00000532268 GIGYF1O75420 1035 aaPredicted RBP12.23□□□□□ -0.45
SRPRA-207ENST00000532268 SNRPA1P09661 255 aaKnown RBP12.23□□□□□ -0.45
SRPRA-207ENST00000532268 CCDC30Q5VVM6 783 aa12.23□□□□□ -0.45
SRPRA-207ENST00000532268 PTF1AQ7RTS3 328 aa12.23□□□□□ -0.45
SRPRA-207ENST00000532268 BCL11BQ9C0K0 894 aaPredicted RBP12.23□□□□□ -0.45
SRPRA-207ENST00000532268 SUPT16HQ9Y5B9 1047 aaKnown RBP12.23□□□□□ -0.45
SRPRA-207ENST00000532268 PALLDQ8WX93 1383 aa12.22□□□□□ -0.45
SRPRA-207ENST00000532268 HEG1Q9ULI3 1381 aa12.22□□□□□ -0.45
SRPRA-207ENST00000532268 SOS1Q07889 1333 aaPredicted RBP12.22□□□□□ -0.45
SRPRA-207ENST00000532268 PRAMEF22A3QJZ6 481 aa12.22□□□□□ -0.45
SRPRA-207ENST00000532268 BCAR3O75815 825 aa12.22□□□□□ -0.45
SRPRA-207ENST00000532268 RARSP54136 660 aaKnown RBP12.22□□□□□ -0.45
SRPRA-207ENST00000532268 SSH1Q8WYL5 1049 aa12.22□□□□□ -0.45
SRPRA-207ENST00000532268 FRAT1Q92837 279 aaPredicted RBP12.22□□□□□ -0.45
SRPRA-207ENST00000532268 ZNF428Q96B54 188 aa12.22□□□□□ -0.45
SRPRA-207ENST00000532268 NHSQ6T4R5 1651 aa12.22□□□□□ -0.45
SRPRA-207ENST00000532268 APBA3O96018 575 aa12.21□□□□□ -0.45
SRPRA-207ENST00000532268 HOXB7P09629 217 aa12.21□□□□□ -0.45
SRPRA-207ENST00000532268 ATP6V1AP38606 617 aa12.21□□□□□ -0.45
SRPRA-207ENST00000532268 ALDH1L2Q3SY69 923 aa12.21□□□□□ -0.45
SRPRA-207ENST00000532268 DEFB132Q7Z7B7 95 aa12.21□□□□□ -0.45
SRPRA-207ENST00000532268 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.21□□□□□ -0.45
SRPRA-207ENST00000532268 TEX13AQ9BXU3 409 aaPredicted RBP12.21□□□□□ -0.45
SRPRA-207ENST00000532268 LOC102724428A0A0B4J2F2 783 aa12.2□□□□□ -0.46
SRPRA-207ENST00000532268 STARD3NLO95772 234 aa12.2□□□□□ -0.46
SRPRA-207ENST00000532268 SLC4A2P04920 1241 aa12.2□□□□□ -0.46
SRPRA-207ENST00000532268 NEFLP07196 543 aa12.2□□□□□ -0.46
SRPRA-207ENST00000532268 SIK1P57059 783 aa12.2□□□□□ -0.46
SRPRA-207ENST00000532268 DNAJC10Q8IXB1 793 aa12.2□□□□□ -0.46
SRPRA-207ENST00000532268 KCPQ6ZWJ8 1503 aa12.2□□□□□ -0.46
SRPRA-207ENST00000532268 TNS1Q9HBL0 1735 aaKnown RBP12.2□□□□□ -0.46
SRPRA-207ENST00000532268 PAPPAQ13219 1627 aa12.19□□□□□ -0.46
SRPRA-207ENST00000532268 EN1Q05925 392 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms