RNA–Protein interactions for RNA: ENST00000531589.5

SF3B2-212, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-212ENST00000531589 GPR162Q16538 588 aa17.79■□□□□ 0.44
SF3B2-212ENST00000531589 TAF1LQ8IZX4 1826 aa17.78■□□□□ 0.44
SF3B2-212ENST00000531589 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.78■□□□□ 0.44
SF3B2-212ENST00000531589 LINC00116Q8NCU8 138 aa17.78■□□□□ 0.44
SF3B2-212ENST00000531589 NPC1L1Q9UHC9 1359 aa17.78■□□□□ 0.44
SF3B2-212ENST00000531589 DIAPH1O60610 1272 aaKnown RBP17.77■□□□□ 0.44
SF3B2-212ENST00000531589 PHF14O94880 888 aa17.77■□□□□ 0.44
SF3B2-212ENST00000531589 MSL1Q68DK7 614 aa17.77■□□□□ 0.44
SF3B2-212ENST00000531589 RBM42Q9BTD8 480 aaKnown RBP17.77■□□□□ 0.44
SF3B2-212ENST00000531589 GNPATO15228 680 aa17.76■□□□□ 0.43
SF3B2-212ENST00000531589 ITPK1Q13572 414 aa17.76■□□□□ 0.43
SF3B2-212ENST00000531589 AKAP4Q5JQC9 854 aa17.75■□□□□ 0.43
SF3B2-212ENST00000531589 CD2APQ9Y5K6 639 aa17.75■□□□□ 0.43
SF3B2-212ENST00000531589 KDM6AO15550 1401 aaPredicted RBP17.74■□□□□ 0.43
SF3B2-212ENST00000531589 PELP1Q8IZL8 1130 aaKnown RBP17.74■□□□□ 0.43
SF3B2-212ENST00000531589 NFATC2IPQ8NCF5 419 aa17.74■□□□□ 0.43
SF3B2-212ENST00000531589 RTCBQ9Y3I0 505 aaKnown RBP17.74■□□□□ 0.43
SF3B2-212ENST00000531589 HMOX1P09601 288 aa17.73■□□□□ 0.43
SF3B2-212ENST00000531589 TRAPPC3LQ5T215 181 aa17.73■□□□□ 0.43
SF3B2-212ENST00000531589 RC3H1Q5TC82 1133 aaKnown RBP17.73■□□□□ 0.43
SF3B2-212ENST00000531589 NLGN2Q8NFZ4 835 aa17.73■□□□□ 0.43
SF3B2-212ENST00000531589 GRIN3BO60391 1043 aa17.72■□□□□ 0.43
SF3B2-212ENST00000531589 AMIGO3Q86WK7 504 aa17.72■□□□□ 0.43
SF3B2-212ENST00000531589 ADRA2BP18089 450 aa17.71■□□□□ 0.43
SF3B2-212ENST00000531589 CNGB1Q14028 1251 aaPredicted RBP17.71■□□□□ 0.43
SF3B2-212ENST00000531589 UBR3Q6ZT12 1888 aa17.71■□□□□ 0.43
SF3B2-212ENST00000531589 CNTNAP4Q9C0A0 1308 aa17.71■□□□□ 0.42
SF3B2-212ENST00000531589 PTCD1O75127 700 aaKnown RBP17.7■□□□□ 0.42
SF3B2-212ENST00000531589 SLC4A9Q96Q91 983 aa17.7■□□□□ 0.42
SF3B2-212ENST00000531589 ZNF831Q5JPB2 1677 aa17.7■□□□□ 0.42
SF3B2-212ENST00000531589 RPS6KA4O75676 772 aa17.69■□□□□ 0.42
SF3B2-212ENST00000531589 SMIM5Q71RC9 77 aa17.69■□□□□ 0.42
SF3B2-212ENST00000531589 NLGN1Q8N2Q7 840 aa17.69■□□□□ 0.42
SF3B2-212ENST00000531589 U2SURPO15042 1029 aaKnown RBP17.68■□□□□ 0.42
SF3B2-212ENST00000531589 CFAP53Q96M91 514 aa17.68■□□□□ 0.42
SF3B2-212ENST00000531589 SLC52A2Q9HAB3 445 aa17.68■□□□□ 0.42
SF3B2-212ENST00000531589 RFC4P35249 363 aa17.67■□□□□ 0.42
SF3B2-212ENST00000531589 MTHFSDQ2M296 383 aaKnown RBP17.67■□□□□ 0.42
SF3B2-212ENST00000531589 ZNF784Q8NCA9 323 aaPredicted RBP17.67■□□□□ 0.42
SF3B2-212ENST00000531589 RNMTO43148 476 aaKnown RBP17.66■□□□□ 0.42
SF3B2-212ENST00000531589 ARHGEF1Q92888 912 aaKnown RBP17.66■□□□□ 0.42
SF3B2-212ENST00000531589 LGR6Q9HBX8 967 aa17.66■□□□□ 0.42
SF3B2-212ENST00000531589 CHD4Q14839 1912 aa17.64■□□□□ 0.42
SF3B2-212ENST00000531589 MMP10P09238 476 aa17.64■□□□□ 0.41
SF3B2-212ENST00000531589 CRKLP46109 303 aaKnown RBP17.64■□□□□ 0.41
SF3B2-212ENST00000531589 GAS2L2Q8NHY3 880 aa17.64■□□□□ 0.41
SF3B2-212ENST00000531589 NUDCQ9Y266 331 aa17.64■□□□□ 0.41
SF3B2-212ENST00000531589 SCN11AQ9UI33 1791 aa17.63■□□□□ 0.41
SF3B2-212ENST00000531589 YBX3P16989 372 aaKnown RBP eCLIP17.63■□□□□ 0.416e-11■□□□□ 9.7
SF3B2-212ENST00000531589 COL3A1P02461 1466 aaPredicted RBP17.63■□□□□ 0.41
SF3B2-212ENST00000531589 COL5A3P25940 1745 aaPredicted RBP17.62■□□□□ 0.41
SF3B2-212ENST00000531589 GYS1P13807 737 aa17.61■□□□□ 0.41
SF3B2-212ENST00000531589 PARP3Q9Y6F1 533 aa17.61■□□□□ 0.41
SF3B2-212ENST00000531589 MRC1P22897 1456 aa17.61■□□□□ 0.41
SF3B2-212ENST00000531589 UTRNP46939 3433 aa17.6■□□□□ 0.41
SF3B2-212ENST00000531589 GNAT3A8MTJ3 354 aa17.6■□□□□ 0.41
SF3B2-212ENST00000531589 TEFQ10587 303 aa17.6■□□□□ 0.41
SF3B2-212ENST00000531589 TTC5Q8N0Z6 440 aa17.6■□□□□ 0.41
SF3B2-212ENST00000531589 VSIG10Q8N0Z9 540 aa17.6■□□□□ 0.41
SF3B2-212ENST00000531589 CCDC87Q9NVE4 849 aa17.6■□□□□ 0.41
SF3B2-212ENST00000531589 TGFB2P61812 414 aa17.59■□□□□ 0.41
SF3B2-212ENST00000531589 SLC39A6Q13433 755 aa17.59■□□□□ 0.41
SF3B2-212ENST00000531589 DNAJC10Q8IXB1 793 aa17.59■□□□□ 0.41
SF3B2-212ENST00000531589 CICQ96RK0 1608 aaPredicted RBP17.58■□□□□ 0.41
SF3B2-212ENST00000531589 PPP2R1AP30153 589 aa17.58■□□□□ 0.4
SF3B2-212ENST00000531589 INTS5Q6P9B9 1019 aaKnown RBP17.58■□□□□ 0.4
SF3B2-212ENST00000531589 USP42Q9H9J4 1324 aaKnown RBP17.56■□□□□ 0.4
SF3B2-212ENST00000531589 ADAMTS7Q9UKP4 1686 aa17.56■□□□□ 0.4
SF3B2-212ENST00000531589 ZPR1O75312 459 aa17.56■□□□□ 0.4
SF3B2-212ENST00000531589 U2AF1L5P0DN76 240 aaPredicted RBP17.56■□□□□ 0.4
SF3B2-212ENST00000531589 CYP19A1P11511 503 aaPredicted RBP17.56■□□□□ 0.4
SF3B2-212ENST00000531589 PRKAR2BP31323 418 aa17.56■□□□□ 0.4
SF3B2-212ENST00000531589 U2AF1Q01081 240 aaKnown RBP eCLIP17.56■□□□□ 0.4
SF3B2-212ENST00000531589 IL17REQ8NFR9 667 aa17.56■□□□□ 0.4
SF3B2-212ENST00000531589 TJP1Q07157 1748 aa17.55■□□□□ 0.4
SF3B2-212ENST00000531589 FCHSD2O94868 740 aa17.55■□□□□ 0.4
SF3B2-212ENST00000531589 STARD3NLO95772 234 aa17.55■□□□□ 0.4
SF3B2-212ENST00000531589 TEX13AQ9BXU3 409 aaPredicted RBP17.55■□□□□ 0.4
SF3B2-212ENST00000531589 RSPH6AQ9H0K4 717 aa17.55■□□□□ 0.4
SF3B2-212ENST00000531589 MYH14Q7Z406 1995 aaKnown RBP17.55■□□□□ 0.4
SF3B2-212ENST00000531589 ZNF790Q6PG37 636 aa17.54■□□□□ 0.4
SF3B2-212ENST00000531589 SRP68Q9UHB9 627 aaKnown RBP17.54■□□□□ 0.4
SF3B2-212ENST00000531589 SOS1Q07889 1333 aaPredicted RBP17.53■□□□□ 0.4
SF3B2-212ENST00000531589 KCPQ6ZWJ8 1503 aa17.53■□□□□ 0.4
SF3B2-212ENST00000531589 FKBP8Q14318 412 aa17.53■□□□□ 0.4
SF3B2-212ENST00000531589 RTF1Q92541 710 aaKnown RBP17.53■□□□□ 0.4
SF3B2-212ENST00000531589 PHACTR3Q96KR7 559 aa17.53■□□□□ 0.4
SF3B2-212ENST00000531589 C10orf71Q711Q0 1435 aa17.53■□□□□ 0.4
SF3B2-212ENST00000531589 NEFMP07197 916 aa17.52■□□□□ 0.4
SF3B2-212ENST00000531589 NARFQ9UHQ1 456 aa17.52■□□□□ 0.4
SF3B2-212ENST00000531589 WWC3Q9ULE0 1092 aa17.52■□□□□ 0.4
SF3B2-212ENST00000531589 ZBTB1Q9Y2K1 713 aa17.52■□□□□ 0.4
SF3B2-212ENST00000531589 C4AP0C0L4 1744 aa17.52■□□□□ 0.39
SF3B2-212ENST00000531589 PXDNLA1KZ92 1463 aa17.51■□□□□ 0.39
SF3B2-212ENST00000531589 A0A0G2JLW4 131 aa17.51■□□□□ 0.39
SF3B2-212ENST00000531589 GIGYF1O75420 1035 aaPredicted RBP17.51■□□□□ 0.39
SF3B2-212ENST00000531589 USPL1Q5W0Q7 1092 aa17.51■□□□□ 0.39
SF3B2-212ENST00000531589 ZNF496Q96IT1 587 aaPredicted RBP17.51■□□□□ 0.39
SF3B2-212ENST00000531589 FMNL2Q96PY5 1086 aa17.51■□□□□ 0.39
SF3B2-212ENST00000531589 COL15A1P39059 1388 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms