RNA–Protein interactions for RNA: ENST00000531178.1

CDK2AP2-204, Transcript of cyclin dependent kinase 2 associated protein 2, humanhuman

TSL 1 (best)

Gene CDK2AP2, Length 923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP2-204ENST00000531178 CABP4P57796 275 aa19.87■□□□□ 0.77
CDK2AP2-204ENST00000531178 TSPYL4Q9UJ04 414 aa19.87■□□□□ 0.77
CDK2AP2-204ENST00000531178 BTBD11A6QL63 1104 aa19.86■□□□□ 0.77
CDK2AP2-204ENST00000531178 NFATC2IPQ8NCF5 419 aa19.86■□□□□ 0.77
CDK2AP2-204ENST00000531178 MIS18AQ9NYP9 233 aa19.86■□□□□ 0.77
CDK2AP2-204ENST00000531178 MRC1P22897 1456 aa19.84■□□□□ 0.77
CDK2AP2-204ENST00000531178 VIRMAQ69YN4 1812 aaKnown RBP19.83■□□□□ 0.77
CDK2AP2-204ENST00000531178 EXOSC9Q06265 439 aaKnown RBP19.83■□□□□ 0.77
CDK2AP2-204ENST00000531178 POTEAQ6S8J7 498 aa19.83■□□□□ 0.77
CDK2AP2-204ENST00000531178 TMOD3Q9NYL9 352 aa19.82■□□□□ 0.76
CDK2AP2-204ENST00000531178 SIPA1L3O60292 1781 aaPredicted RBP19.8■□□□□ 0.76
CDK2AP2-204ENST00000531178 CT47B1P0C2W7 299 aaPredicted RBP19.8■□□□□ 0.76
CDK2AP2-204ENST00000531178 TOGARAM1Q9Y4F4 1720 aa19.79■□□□□ 0.76
CDK2AP2-204ENST00000531178 PRIM1P49642 420 aaKnown RBP19.79■□□□□ 0.76
CDK2AP2-204ENST00000531178 KRT27Q7Z3Y8 459 aa19.79■□□□□ 0.76
CDK2AP2-204ENST00000531178 SYTL4Q96C24 671 aaPredicted RBP19.79■□□□□ 0.76
CDK2AP2-204ENST00000531178 ZNF790Q6PG37 636 aa19.78■□□□□ 0.76
CDK2AP2-204ENST00000531178 BCL9O00512 1426 aa19.77■□□□□ 0.76
CDK2AP2-204ENST00000531178 KCNQ3O43525 872 aa19.77■□□□□ 0.76
CDK2AP2-204ENST00000531178 EIF4A1P60842 406 aaKnown RBP19.77■□□□□ 0.76
CDK2AP2-204ENST00000531178 SLC39A6Q13433 755 aa19.77■□□□□ 0.76
CDK2AP2-204ENST00000531178 TTC5Q8N0Z6 440 aa19.77■□□□□ 0.76
CDK2AP2-204ENST00000531178 C8orf58Q8NAV2 365 aa19.77■□□□□ 0.76
CDK2AP2-204ENST00000531178 PIGBQ92521 554 aa19.77■□□□□ 0.76
CDK2AP2-204ENST00000531178 ACSBG1Q96GR2 724 aa19.77■□□□□ 0.76
CDK2AP2-204ENST00000531178 KDM3BQ7LBC6 1761 aa19.76■□□□□ 0.75
CDK2AP2-204ENST00000531178 TWISTNBQ3B726 338 aaPredicted RBP19.76■□□□□ 0.75
CDK2AP2-204ENST00000531178 RCAN3Q9UKA8 241 aa19.76■□□□□ 0.75
CDK2AP2-204ENST00000531178 ELL2O00472 640 aaPredicted RBP19.75■□□□□ 0.75
CDK2AP2-204ENST00000531178 FAM182BQ5T319 152 aa19.75■□□□□ 0.75
CDK2AP2-204ENST00000531178 TSPYL6Q8N831 410 aa19.75■□□□□ 0.75
CDK2AP2-204ENST00000531178 DOT1LQ8TEK3 1739 aa19.75■□□□□ 0.75
CDK2AP2-204ENST00000531178 VAMP4O75379 141 aa19.74■□□□□ 0.75
CDK2AP2-204ENST00000531178 KRT24Q2M2I5 525 aa19.74■□□□□ 0.75
CDK2AP2-204ENST00000531178 FAM196AQ6ZSG2 479 aa19.74■□□□□ 0.75
CDK2AP2-204ENST00000531178 ZNF428Q96B54 188 aa19.74■□□□□ 0.75
CDK2AP2-204ENST00000531178 RGS12O14924 1447 aa19.74■□□□□ 0.75
CDK2AP2-204ENST00000531178 SOS1Q07889 1333 aaPredicted RBP19.74■□□□□ 0.75
CDK2AP2-204ENST00000531178 ITGB4P16144 1822 aa19.73■□□□□ 0.75
CDK2AP2-204ENST00000531178 BRWD3Q6RI45 1802 aa19.72■□□□□ 0.75
CDK2AP2-204ENST00000531178 KCNQ2O43526 872 aa19.72■□□□□ 0.75
CDK2AP2-204ENST00000531178 FMNL2Q96PY5 1086 aa19.72■□□□□ 0.75
CDK2AP2-204ENST00000531178 ATG3Q9NT62 314 aa19.72■□□□□ 0.75
CDK2AP2-204ENST00000531178 HOXB7P09629 217 aa19.71■□□□□ 0.75
CDK2AP2-204ENST00000531178 ZNF496Q96IT1 587 aaPredicted RBP19.71■□□□□ 0.75
CDK2AP2-204ENST00000531178 ASAP1Q9ULH1 1129 aa19.71■□□□□ 0.75
CDK2AP2-204ENST00000531178 HEG1Q9ULI3 1381 aa19.7■□□□□ 0.74
CDK2AP2-204ENST00000531178 GIGYF1O75420 1035 aaPredicted RBP19.7■□□□□ 0.74
CDK2AP2-204ENST00000531178 RARSP54136 660 aaKnown RBP19.7■□□□□ 0.74
CDK2AP2-204ENST00000531178 CHMP4AQ9BY43 222 aa19.7■□□□□ 0.74
CDK2AP2-204ENST00000531178 PAPPAQ13219 1627 aa19.69■□□□□ 0.74
CDK2AP2-204ENST00000531178 ALDH1L2Q3SY69 923 aa19.69■□□□□ 0.74
CDK2AP2-204ENST00000531178 PTCD1O75127 700 aaKnown RBP19.68■□□□□ 0.74
CDK2AP2-204ENST00000531178 SNRPA1P09661 255 aaKnown RBP19.68■□□□□ 0.74
CDK2AP2-204ENST00000531178 SMARCC1Q92922 1105 aaPredicted RBP19.68■□□□□ 0.74
CDK2AP2-204ENST00000531178 SUPT16HQ9Y5B9 1047 aaKnown RBP19.68■□□□□ 0.74
CDK2AP2-204ENST00000531178 KAT6BQ8WYB5 2073 aa19.67■□□□□ 0.74
CDK2AP2-204ENST00000531178 BCL11BQ9C0K0 894 aaPredicted RBP19.67■□□□□ 0.74
CDK2AP2-204ENST00000531178 NHSQ6T4R5 1651 aa19.67■□□□□ 0.74
CDK2AP2-204ENST00000531178 KCPQ6ZWJ8 1503 aa19.66■□□□□ 0.74
CDK2AP2-204ENST00000531178 CCDC30Q5VVM6 783 aa19.66■□□□□ 0.74
CDK2AP2-204ENST00000531178 SSH1Q8WYL5 1049 aa19.66■□□□□ 0.74
CDK2AP2-204ENST00000531178 SMC4Q9NTJ3 1288 aa19.66■□□□□ 0.74
CDK2AP2-204ENST00000531178 UBR2Q8IWV8 1755 aa19.65■□□□□ 0.74
CDK2AP2-204ENST00000531178 BCAR3O75815 825 aa19.65■□□□□ 0.74
CDK2AP2-204ENST00000531178 HDGFL1Q5TGJ6 251 aa19.65■□□□□ 0.74
CDK2AP2-204ENST00000531178 PTF1AQ7RTS3 328 aa19.65■□□□□ 0.74
CDK2AP2-204ENST00000531178 VSIG10Q8N0Z9 540 aa19.65■□□□□ 0.74
CDK2AP2-204ENST00000531178 RBM42Q9BTD8 480 aaKnown RBP19.65■□□□□ 0.74
CDK2AP2-204ENST00000531178 EIF2S2P20042 333 aaKnown RBP19.64■□□□□ 0.73
CDK2AP2-204ENST00000531178 BCL2L13Q9BXK5 485 aa19.64■□□□□ 0.73
CDK2AP2-204ENST00000531178 SBF2Q86WG5 1849 aa19.63■□□□□ 0.73
CDK2AP2-204ENST00000531178 PALLDQ8WX93 1383 aa19.63■□□□□ 0.73
CDK2AP2-204ENST00000531178 PRAMEF22A3QJZ6 481 aa19.63■□□□□ 0.73
CDK2AP2-204ENST00000531178 STK31Q9BXU1 1019 aa19.63■□□□□ 0.73
CDK2AP2-204ENST00000531178 TEX13AQ9BXU3 409 aaPredicted RBP19.63■□□□□ 0.73
CDK2AP2-204ENST00000531178 TCERG1O14776 1098 aaKnown RBP19.62■□□□□ 0.73
CDK2AP2-204ENST00000531178 TRIM37O94972 964 aa19.62■□□□□ 0.73
CDK2AP2-204ENST00000531178 MRPL50Q8N5N7 158 aaKnown RBP19.62■□□□□ 0.73
CDK2AP2-204ENST00000531178 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.62■□□□□ 0.73
CDK2AP2-204ENST00000531178 NECTIN2Q92692 538 aa19.62■□□□□ 0.73
CDK2AP2-204ENST00000531178 RNF123Q5XPI4 1314 aa19.61■□□□□ 0.73
CDK2AP2-204ENST00000531178 BRPF1P55201 1214 aaPredicted RBP19.61■□□□□ 0.73
CDK2AP2-204ENST00000531178 RRP1P56182 461 aaKnown RBP19.61■□□□□ 0.73
CDK2AP2-204ENST00000531178 USP16Q9Y5T5 823 aa19.61■□□□□ 0.73
CDK2AP2-204ENST00000531178 LOC102724428A0A0B4J2F2 783 aa19.6■□□□□ 0.73
CDK2AP2-204ENST00000531178 SLC4A2P04920 1241 aa19.6■□□□□ 0.73
CDK2AP2-204ENST00000531178 SIK1P57059 783 aa19.6■□□□□ 0.73
CDK2AP2-204ENST00000531178 DNAJC10Q8IXB1 793 aa19.59■□□□□ 0.73
CDK2AP2-204ENST00000531178 SLC4A9Q96Q91 983 aa19.59■□□□□ 0.73
CDK2AP2-204ENST00000531178 DBF4Q9UBU7 674 aaPredicted RBP19.59■□□□□ 0.73
CDK2AP2-204ENST00000531178 BTAF1O14981 1849 aa19.59■□□□□ 0.73
CDK2AP2-204ENST00000531178 C5P01031 1676 aa19.59■□□□□ 0.73
CDK2AP2-204ENST00000531178 KIF16BQ96L93 1317 aa19.58■□□□□ 0.73
CDK2AP2-204ENST00000531178 STARD3NLO95772 234 aa19.58■□□□□ 0.72
CDK2AP2-204ENST00000531178 CANXP27824 592 aaKnown RBP19.58■□□□□ 0.72
CDK2AP2-204ENST00000531178 ATP6V1AP38606 617 aa19.58■□□□□ 0.72
CDK2AP2-204ENST00000531178 FRAT1Q92837 279 aaPredicted RBP19.58■□□□□ 0.72
CDK2AP2-204ENST00000531178 IPO8O15397 1037 aaKnown RBP19.57■□□□□ 0.72
CDK2AP2-204ENST00000531178 CHPF2Q9P2E5 772 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms