RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 PLSCR1O15162 318 aa21.14■□□□□ 0.97
BRK1-201ENST00000530758 PIGBQ92521 554 aa21.14■□□□□ 0.97
BRK1-201ENST00000530758 RTF1Q92541 710 aaKnown RBP21.14■□□□□ 0.97
BRK1-201ENST00000530758 SLC52A2Q9HAB3 445 aa21.14■□□□□ 0.97
BRK1-201ENST00000530758 LMOD3Q0VAK6 560 aa21.13■□□□□ 0.97
BRK1-201ENST00000530758 NFATC2IPQ8NCF5 419 aa21.13■□□□□ 0.97
BRK1-201ENST00000530758 TRIM35Q9UPQ4 493 aa21.13■□□□□ 0.97
BRK1-201ENST00000530758 CABP4P57796 275 aa21.12■□□□□ 0.97
BRK1-201ENST00000530758 CCDC27Q2M243 656 aa21.12■□□□□ 0.97
BRK1-201ENST00000530758 NGEFQ8N5V2 710 aa21.12■□□□□ 0.97
BRK1-201ENST00000530758 TMOD3Q9NYL9 352 aa21.12■□□□□ 0.97
BRK1-201ENST00000530758 SYTL4Q96C24 671 aaPredicted RBP21.11■□□□□ 0.97
BRK1-201ENST00000530758 R3HDM1Q15032 1099 aaKnown RBP21.1■□□□□ 0.97
BRK1-201ENST00000530758 MCM10Q7L590 875 aa21.1■□□□□ 0.97
BRK1-201ENST00000530758 RRP7AQ9Y3A4 280 aaKnown RBP21.1■□□□□ 0.97
BRK1-201ENST00000530758 LRP5O75197 1615 aa21.1■□□□□ 0.97
BRK1-201ENST00000530758 LY75O60449 1722 aa21.09■□□□□ 0.97
BRK1-201ENST00000530758 DCTN1Q14203 1278 aa21.09■□□□□ 0.97
BRK1-201ENST00000530758 NEUROD2Q15784 382 aa21.09■□□□□ 0.97
BRK1-201ENST00000530758 TEFQ10587 303 aa21.08■□□□□ 0.97
BRK1-201ENST00000530758 PROM2Q8N271 834 aa21.08■□□□□ 0.97
BRK1-201ENST00000530758 PAPPAQ13219 1627 aa21.07■□□□□ 0.96
BRK1-201ENST00000530758 SMARCC1Q92922 1105 aaPredicted RBP21.07■□□□□ 0.96
BRK1-201ENST00000530758 ATG3Q9NT62 314 aa21.07■□□□□ 0.96
BRK1-201ENST00000530758 TAF7Q15545 349 aaPredicted RBP21.06■□□□□ 0.96
BRK1-201ENST00000530758 BABAM1Q9NWV8 329 aa21.06■□□□□ 0.96
BRK1-201ENST00000530758 ZNF831Q5JPB2 1677 aa21.05■□□□□ 0.96
BRK1-201ENST00000530758 ASAP1Q9ULH1 1129 aa21.05■□□□□ 0.96
BRK1-201ENST00000530758 WWC1Q8IX03 1113 aa21.04■□□□□ 0.96
BRK1-201ENST00000530758 UBR2Q8IWV8 1755 aa21.04■□□□□ 0.96
BRK1-201ENST00000530758 THUMPD2Q9BTF0 503 aaKnown RBP21.03■□□□□ 0.96
BRK1-201ENST00000530758 KDM3BQ7LBC6 1761 aa21.02■□□□□ 0.96
BRK1-201ENST00000530758 PALLDQ8WX93 1383 aa21.02■□□□□ 0.96
BRK1-201ENST00000530758 ANO8Q9HCE9 1232 aaPredicted RBP21.02■□□□□ 0.96
BRK1-201ENST00000530758 BTBD11A6QL63 1104 aa21.01■□□□□ 0.95
BRK1-201ENST00000530758 CALD1Q05682 793 aaKnown RBP21.01■□□□□ 0.95
BRK1-201ENST00000530758 SLC27A3Q5K4L6 730 aa21.01■□□□□ 0.95
BRK1-201ENST00000530758 ZNF790Q6PG37 636 aa21.01■□□□□ 0.95
BRK1-201ENST00000530758 CHL1O00533 1208 aa21■□□□□ 0.95
BRK1-201ENST00000530758 ZNF853P0CG23 659 aa21■□□□□ 0.95
BRK1-201ENST00000530758 TXNRD1Q16881 649 aa21■□□□□ 0.95
BRK1-201ENST00000530758 WDR63Q8IWG1 891 aa21■□□□□ 0.95
BRK1-201ENST00000530758 ZNF521Q96K83 1311 aa21■□□□□ 0.95
BRK1-201ENST00000530758 CICQ96RK0 1608 aaPredicted RBP21■□□□□ 0.95
BRK1-201ENST00000530758 CFAP44Q96MT7 982 aa20.99■□□□□ 0.95
BRK1-201ENST00000530758 IL16Q14005 1332 aa20.99■□□□□ 0.95
BRK1-201ENST00000530758 KCPQ6ZWJ8 1503 aa20.99■□□□□ 0.95
BRK1-201ENST00000530758 CASZ1Q86V15 1759 aa20.98■□□□□ 0.95
BRK1-201ENST00000530758 HMGB2P26583 209 aaKnown RBP20.98■□□□□ 0.95
BRK1-201ENST00000530758 SLC39A6Q13433 755 aa20.98■□□□□ 0.95
BRK1-201ENST00000530758 TAF1LQ8IZX4 1826 aa20.98■□□□□ 0.95
BRK1-201ENST00000530758 LOC102724428A0A0B4J2F2 783 aa20.97■□□□□ 0.95
BRK1-201ENST00000530758 SIK1P57059 783 aa20.97■□□□□ 0.95
BRK1-201ENST00000530758 VSIG10Q8N0Z9 540 aa20.97■□□□□ 0.95
BRK1-201ENST00000530758 SLC4A9Q96Q91 983 aa20.97■□□□□ 0.95
BRK1-201ENST00000530758 IFT57Q9NWB7 429 aa20.97■□□□□ 0.95
BRK1-201ENST00000530758 NBPF14Q5TI25 921 aa20.96■□□□□ 0.95
BRK1-201ENST00000530758 LRRC4BQ9NT99 713 aa20.96■□□□□ 0.95
BRK1-201ENST00000530758 HEG1Q9ULI3 1381 aa20.96■□□□□ 0.95
BRK1-201ENST00000530758 KCNQ3O43525 872 aa20.95■□□□□ 0.94
BRK1-201ENST00000530758 GNAI1P63096 354 aa20.95■□□□□ 0.94
BRK1-201ENST00000530758 TTC5Q8N0Z6 440 aa20.95■□□□□ 0.94
BRK1-201ENST00000530758 MIS18AQ9NYP9 233 aa20.95■□□□□ 0.94
BRK1-201ENST00000530758 SENP3-EIF4A1A0A087X0R7 540 aa20.94■□□□□ 0.94
BRK1-201ENST00000530758 ZNF496Q96IT1 587 aaPredicted RBP20.94■□□□□ 0.94
BRK1-201ENST00000530758 CCNL1Q9UK58 526 aaPredicted RBP20.94■□□□□ 0.94
BRK1-201ENST00000530758 SALL2Q9Y467 1007 aaPredicted RBP20.94■□□□□ 0.94
BRK1-201ENST00000530758 FMNL2Q96PY5 1086 aa20.93■□□□□ 0.94
BRK1-201ENST00000530758 TSPYL4Q9UJ04 414 aa20.93■□□□□ 0.94
BRK1-201ENST00000530758 C5P01031 1676 aa20.93■□□□□ 0.94
BRK1-201ENST00000530758 COL5A3P25940 1745 aaPredicted RBP20.92■□□□□ 0.94
BRK1-201ENST00000530758 TJP1Q07157 1748 aa20.92■□□□□ 0.94
BRK1-201ENST00000530758 PTCD1O75127 700 aaKnown RBP20.92■□□□□ 0.94
BRK1-201ENST00000530758 ATP6V1AP38606 617 aa20.92■□□□□ 0.94
BRK1-201ENST00000530758 EIF4A1P60842 406 aaKnown RBP20.92■□□□□ 0.94
BRK1-201ENST00000530758 RBM42Q9BTD8 480 aaKnown RBP20.92■□□□□ 0.94
BRK1-201ENST00000530758 PDGFDQ9GZP0 370 aaPredicted RBP20.92■□□□□ 0.94
BRK1-201ENST00000530758 ITPK1Q13572 414 aa20.91■□□□□ 0.94
BRK1-201ENST00000530758 TEX13AQ9BXU3 409 aaPredicted RBP20.91■□□□□ 0.94
BRK1-201ENST00000530758 MBIPQ9NS73 344 aa20.9■□□□□ 0.94
BRK1-201ENST00000530758 SNRPA1P09661 255 aaKnown RBP20.88■□□□□ 0.93
BRK1-201ENST00000530758 KCNQ4P56696 695 aa20.88■□□□□ 0.93
BRK1-201ENST00000530758 RC3H1Q5TC82 1133 aaKnown RBP20.88■□□□□ 0.93
BRK1-201ENST00000530758 LAS1LQ9Y4W2 734 aaKnown RBP20.88■□□□□ 0.93
BRK1-201ENST00000530758 MYH14Q7Z406 1995 aaKnown RBP20.88■□□□□ 0.93
BRK1-201ENST00000530758 C4BP0C0L5 1744 aa20.87■□□□□ 0.93
BRK1-201ENST00000530758 GIGYF1O75420 1035 aaPredicted RBP20.87■□□□□ 0.93
BRK1-201ENST00000530758 GOLGA2Q08379 1002 aa20.87■□□□□ 0.93
BRK1-201ENST00000530758 SLC15A2Q16348 729 aa20.87■□□□□ 0.93
BRK1-201ENST00000530758 AKT1S1Q96B36 256 aa20.87■□□□□ 0.93
BRK1-201ENST00000530758 SPINK5Q9NQ38 1064 aaPredicted RBP20.87■□□□□ 0.93
BRK1-201ENST00000530758 HNRNPUQ00839 825 aaKnown RBP eCLIP20.86■□□□□ 0.93
BRK1-201ENST00000530758 DNAJC10Q8IXB1 793 aa20.86■□□□□ 0.93
BRK1-201ENST00000530758 LINC00116Q8NCU8 138 aa20.86■□□□□ 0.93
BRK1-201ENST00000530758 TUBGCP6Q96RT7 1819 aa20.85■□□□□ 0.93
BRK1-201ENST00000530758 CNTNAP4Q9C0A0 1308 aa20.85■□□□□ 0.93
BRK1-201ENST00000530758 QSER1Q2KHR3 1735 aa20.85■□□□□ 0.93
BRK1-201ENST00000530758 CYP19A1P11511 503 aaPredicted RBP20.85■□□□□ 0.93
BRK1-201ENST00000530758 ZNF827Q17R98 1081 aa20.85■□□□□ 0.93
BRK1-201ENST00000530758 TRMT2AQ8IZ69 625 aaKnown RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms