RNA–Protein interactions for RNA: ENST00000530640.6

CTSB-219, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTSB, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-219ENST00000530640 TUBGCP6Q96RT7 1819 aa20.77■□□□□ 0.92
CTSB-219ENST00000530640 NLGN2Q8NFZ4 835 aa20.76■□□□□ 0.91
CTSB-219ENST00000530640 PHKG2P15735 406 aa20.75■□□□□ 0.91
CTSB-219ENST00000530640 IFNL2Q8IZJ0 200 aa20.75■□□□□ 0.91
CTSB-219ENST00000530640 C5P01031 1676 aa20.74■□□□□ 0.91
CTSB-219ENST00000530640 AK7Q96M32 723 aa20.74■□□□□ 0.91
CTSB-219ENST00000530640 GIGYF1O75420 1035 aaPredicted RBP20.73■□□□□ 0.91
CTSB-219ENST00000530640 DIAPH1O60610 1272 aaKnown RBP20.72■□□□□ 0.91
CTSB-219ENST00000530640 IL13P35225 146 aa20.72■□□□□ 0.91
CTSB-219ENST00000530640 PIGBQ92521 554 aa20.72■□□□□ 0.91
CTSB-219ENST00000530640 SSFA2P28290 1259 aa20.72■□□□□ 0.91
CTSB-219ENST00000530640 AEBP1Q8IUX7 1158 aa20.72■□□□□ 0.91
CTSB-219ENST00000530640 SENP3-EIF4A1A0A087X0R7 540 aa20.71■□□□□ 0.91
CTSB-219ENST00000530640 PLEKHO1Q53GL0 409 aaPredicted RBP20.71■□□□□ 0.91
CTSB-219ENST00000530640 SULT6B1Q6IMI4 303 aa20.71■□□□□ 0.91
CTSB-219ENST00000530640 TMOD3Q9NYL9 352 aa20.71■□□□□ 0.91
CTSB-219ENST00000530640 KDRP35968 1356 aa20.7■□□□□ 0.91
CTSB-219ENST00000530640 TAF1LQ8IZX4 1826 aa20.7■□□□□ 0.9
CTSB-219ENST00000530640 YBX3P16989 372 aaKnown RBP eCLIP20.7■□□□□ 0.91e-9■■□□□ 12.9
CTSB-219ENST00000530640 WDR43Q15061 677 aaKnown RBP eCLIP20.7■□□□□ 0.9
CTSB-219ENST00000530640 AMOTQ4VCS5 1084 aa20.7■□□□□ 0.9
CTSB-219ENST00000530640 FAM9BQ8IZU0 186 aa20.7■□□□□ 0.9
CTSB-219ENST00000530640 LOC102724428A0A0B4J2F2 783 aa20.69■□□□□ 0.9
CTSB-219ENST00000530640 HSP90AB1P08238 724 aaKnown RBP20.69■□□□□ 0.9
CTSB-219ENST00000530640 SIK1P57059 783 aa20.69■□□□□ 0.9
CTSB-219ENST00000530640 MSL1Q68DK7 614 aa20.69■□□□□ 0.9
CTSB-219ENST00000530640 ZNF530Q6P9A1 599 aaPredicted RBP20.69■□□□□ 0.9
CTSB-219ENST00000530640 ADAMTS8Q9UP79 889 aa20.68■□□□□ 0.9
CTSB-219ENST00000530640 NUDCQ9Y266 331 aa20.68■□□□□ 0.9
CTSB-219ENST00000530640 C4BP0C0L5 1744 aa20.67■□□□□ 0.9
CTSB-219ENST00000530640 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.67■□□□□ 0.9
CTSB-219ENST00000530640 KDM6AO15550 1401 aaPredicted RBP20.65■□□□□ 0.9
CTSB-219ENST00000530640 C1orf141Q5JVX7 400 aa20.65■□□□□ 0.9
CTSB-219ENST00000530640 DCAF5Q96JK2 942 aa20.65■□□□□ 0.9
CTSB-219ENST00000530640 ATP6V1AP38606 617 aa20.64■□□□□ 0.89
CTSB-219ENST00000530640 ERVV-2B6SEH9 535 aa20.63■□□□□ 0.89
CTSB-219ENST00000530640 U2SURPO15042 1029 aaKnown RBP20.63■□□□□ 0.89
CTSB-219ENST00000530640 HMOX1P09601 288 aa20.62■□□□□ 0.89
CTSB-219ENST00000530640 U2AF1L5P0DN76 240 aaPredicted RBP20.62■□□□□ 0.89
CTSB-219ENST00000530640 U2AF1Q01081 240 aaKnown RBP eCLIP20.62■□□□□ 0.89
CTSB-219ENST00000530640 ASAP1Q9ULH1 1129 aa20.62■□□□□ 0.89
CTSB-219ENST00000530640 PHF14O94880 888 aa20.61■□□□□ 0.89
CTSB-219ENST00000530640 LINC00116Q8NCU8 138 aa20.61■□□□□ 0.89
CTSB-219ENST00000530640 RSPH6AQ9H0K4 717 aa20.61■□□□□ 0.89
CTSB-219ENST00000530640 UBR3Q6ZT12 1888 aa20.61■□□□□ 0.89
CTSB-219ENST00000530640 ADRA2BP18089 450 aa20.6■□□□□ 0.89
CTSB-219ENST00000530640 ATG3Q9NT62 314 aa20.6■□□□□ 0.89
CTSB-219ENST00000530640 GOLGB1Q14789 3259 aaKnown RBP20.6■□□□□ 0.89
CTSB-219ENST00000530640 SCN11AQ9UI33 1791 aa20.6■□□□□ 0.89
CTSB-219ENST00000530640 GNPATO15228 680 aa20.59■□□□□ 0.89
CTSB-219ENST00000530640 CABP4P57796 275 aa20.59■□□□□ 0.89
CTSB-219ENST00000530640 RC3H1Q5TC82 1133 aaKnown RBP20.59■□□□□ 0.89
CTSB-219ENST00000530640 NLGN1Q8N2Q7 840 aa20.59■□□□□ 0.89
CTSB-219ENST00000530640 GPBP1L1Q9HC44 474 aaPredicted RBP20.59■□□□□ 0.89
CTSB-219ENST00000530640 TRAPPC3LQ5T215 181 aa20.59■□□□□ 0.89
CTSB-219ENST00000530640 PLEKHF1Q96S99 279 aa20.59■□□□□ 0.89
CTSB-219ENST00000530640 RTCBQ9Y3I0 505 aaKnown RBP20.59■□□□□ 0.89
CTSB-219ENST00000530640 FCHSD2O94868 740 aa20.58■□□□□ 0.88
CTSB-219ENST00000530640 ITPK1Q13572 414 aa20.58■□□□□ 0.88
CTSB-219ENST00000530640 AKAP4Q5JQC9 854 aa20.58■□□□□ 0.88
CTSB-219ENST00000530640 AMIGO3Q86WK7 504 aa20.58■□□□□ 0.88
CTSB-219ENST00000530640 ATP10DQ9P241 1426 aa20.58■□□□□ 0.88
CTSB-219ENST00000530640 ZNF831Q5JPB2 1677 aa20.58■□□□□ 0.88
CTSB-219ENST00000530640 TGFB2P61812 414 aa20.57■□□□□ 0.88
CTSB-219ENST00000530640 CCDC146Q8IYE0 955 aa20.56■□□□□ 0.88
CTSB-219ENST00000530640 RUNDC1Q96C34 613 aa20.56■□□□□ 0.88
CTSB-219ENST00000530640 VIRMAQ69YN4 1812 aaKnown RBP20.56■□□□□ 0.88
CTSB-219ENST00000530640 ADCY9O60503 1353 aa20.55■□□□□ 0.88
CTSB-219ENST00000530640 YTHDC1Q96MU7 727 aaKnown RBP20.55■□□□□ 0.88
CTSB-219ENST00000530640 RBM42Q9BTD8 480 aaKnown RBP20.55■□□□□ 0.88
CTSB-219ENST00000530640 COL5A3P25940 1745 aaPredicted RBP20.54■□□□□ 0.88
CTSB-219ENST00000530640 PRKAR2BP31323 418 aa20.54■□□□□ 0.88
CTSB-219ENST00000530640 MRC1P22897 1456 aa20.54■□□□□ 0.88
CTSB-219ENST00000530640 CNTNAP4Q9C0A0 1308 aa20.53■□□□□ 0.88
CTSB-219ENST00000530640 MMP10P09238 476 aa20.53■□□□□ 0.88
CTSB-219ENST00000530640 HNRNPUQ00839 825 aaKnown RBP eCLIP20.53■□□□□ 0.88
CTSB-219ENST00000530640 NFATC2IPQ8NCF5 419 aa20.53■□□□□ 0.88
CTSB-219ENST00000530640 PNNQ9H307 717 aaKnown RBP20.53■□□□□ 0.88
CTSB-219ENST00000530640 MTHFSDQ2M296 383 aaKnown RBP20.52■□□□□ 0.88
CTSB-219ENST00000530640 ADAMTS7Q9UKP4 1686 aa20.52■□□□□ 0.88
CTSB-219ENST00000530640 RPS6KA4O75676 772 aa20.51■□□□□ 0.87
CTSB-219ENST00000530640 ZBED9Q6R2W3 1325 aa20.5■□□□□ 0.87
CTSB-219ENST00000530640 RFC4P35249 363 aa20.5■□□□□ 0.87
CTSB-219ENST00000530640 SLC4A9Q96Q91 983 aa20.5■□□□□ 0.87
CTSB-219ENST00000530640 MAPK8IP3Q9UPT6 1336 aa20.5■□□□□ 0.87
CTSB-219ENST00000530640 CICQ96RK0 1608 aaPredicted RBP20.5■□□□□ 0.87
CTSB-219ENST00000530640 DLG5Q8TDM6 1919 aa20.49■□□□□ 0.87
CTSB-219ENST00000530640 ARHGEF1Q92888 912 aaKnown RBP20.49■□□□□ 0.87
CTSB-219ENST00000530640 SLC52A2Q9HAB3 445 aa20.49■□□□□ 0.87
CTSB-219ENST00000530640 CCDC87Q9NVE4 849 aa20.49■□□□□ 0.87
CTSB-219ENST00000530640 TJP1Q07157 1748 aa20.49■□□□□ 0.87
CTSB-219ENST00000530640 APAF1O14727 1248 aa20.48■□□□□ 0.87
CTSB-219ENST00000530640 RNMTO43148 476 aaKnown RBP20.48■□□□□ 0.87
CTSB-219ENST00000530640 PTCD1O75127 700 aaKnown RBP20.48■□□□□ 0.87
CTSB-219ENST00000530640 NCBP3Q53F19 620 aaKnown RBP20.48■□□□□ 0.87
CTSB-219ENST00000530640 SMIM5Q71RC9 77 aa20.48■□□□□ 0.87
CTSB-219ENST00000530640 LGR6Q9HBX8 967 aa20.48■□□□□ 0.87
CTSB-219ENST00000530640 GAS2L2Q8NHY3 880 aa20.47■□□□□ 0.87
CTSB-219ENST00000530640 PHACTR3Q96KR7 559 aa20.47■□□□□ 0.87
CTSB-219ENST00000530640 NGEFQ8N5V2 710 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms