RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 MAGI1Q96QZ7 1491 aaPredicted RBP8.94□□□□□ -0.98
CTNND1-223ENST00000529986 GUCY1B3Q02153 619 aa8.94□□□□□ -0.98
CTNND1-223ENST00000529986 TTC39AQ5SRH9 613 aa8.94□□□□□ -0.98
CTNND1-223ENST00000529986 CFAP70Q5T0N1 1121 aa8.94□□□□□ -0.98
CTNND1-223ENST00000529986 AACSQ86V21 672 aa8.94□□□□□ -0.98
CTNND1-223ENST00000529986 THOC2Q8NI27 1593 aaKnown RBP8.93□□□□□ -0.98
CTNND1-223ENST00000529986 ZSCAN12O43309 604 aa8.93□□□□□ -0.98
CTNND1-223ENST00000529986 TRIM22Q8IYM9 498 aa8.93□□□□□ -0.98
CTNND1-223ENST00000529986 KIF5CO60282 957 aa8.93□□□□□ -0.98
CTNND1-223ENST00000529986 PLCD3Q8N3E9 789 aa8.93□□□□□ -0.98
CTNND1-223ENST00000529986 SLC12A5Q9H2X9 1139 aa8.93□□□□□ -0.98
CTNND1-223ENST00000529986 CCDC69A6NI79 296 aa8.93□□□□□ -0.98
CTNND1-223ENST00000529986 SSBP05455 408 aaKnown RBP eCLIP8.93□□□□□ -0.981e-7■■■■■ 26.8
CTNND1-223ENST00000529986 MNAT1P51948 309 aa8.93□□□□□ -0.98
CTNND1-223ENST00000529986 GTF2A1P52655 376 aaPredicted RBP8.93□□□□□ -0.98
CTNND1-223ENST00000529986 PSME1Q06323 249 aa8.93□□□□□ -0.98
CTNND1-223ENST00000529986 SLFN5Q08AF3 891 aa8.93□□□□□ -0.98
CTNND1-223ENST00000529986 ERC1Q8IUD2 1116 aa8.93□□□□□ -0.98
CTNND1-223ENST00000529986 URB2Q14146 1524 aaKnown RBP8.92□□□□□ -0.98
CTNND1-223ENST00000529986 TOP1P11387 765 aaKnown RBP8.92□□□□□ -0.98
CTNND1-223ENST00000529986 TAF4BQ92750 862 aa8.92□□□□□ -0.98
CTNND1-223ENST00000529986 SMARCC1Q92922 1105 aaPredicted RBP8.92□□□□□ -0.98
CTNND1-223ENST00000529986 GRIN2AQ12879 1464 aa8.92□□□□□ -0.98
CTNND1-223ENST00000529986 CCDC141Q6ZP82 1450 aa8.92□□□□□ -0.98
CTNND1-223ENST00000529986 SRGAP3O43295 1099 aa8.92□□□□□ -0.98
CTNND1-223ENST00000529986 BAG4O95429 457 aaKnown RBP8.92□□□□□ -0.98
CTNND1-223ENST00000529986 ZSCAN23Q3MJ62 389 aa8.92□□□□□ -0.98
CTNND1-223ENST00000529986 HDGFL1Q5TGJ6 251 aa8.92□□□□□ -0.98
CTNND1-223ENST00000529986 PRPF40BQ6NWY9 871 aaKnown RBP8.92□□□□□ -0.98
CTNND1-223ENST00000529986 FAM107BQ9H098 131 aa8.92□□□□□ -0.98
CTNND1-223ENST00000529986 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.92□□□□□ -0.98
CTNND1-223ENST00000529986 V9GYY5 206 aaPredicted RBP8.92□□□□□ -0.98
CTNND1-223ENST00000529986 LIG1P18858 919 aa8.92□□□□□ -0.98
CTNND1-223ENST00000529986 FKBP4Q02790 459 aaKnown RBP eCLIP8.92□□□□□ -0.98
CTNND1-223ENST00000529986 TMC6Q7Z403 805 aa8.92□□□□□ -0.98
CTNND1-223ENST00000529986 WDR63Q8IWG1 891 aa8.92□□□□□ -0.98
CTNND1-223ENST00000529986 ANO10Q9NW15 660 aa8.92□□□□□ -0.98
CTNND1-223ENST00000529986 CTTNBP2Q8WZ74 1663 aa8.92□□□□□ -0.98
CTNND1-223ENST00000529986 BIN1O00499 593 aa8.91□□□□□ -0.98
CTNND1-223ENST00000529986 ATP2C2O75185 946 aa8.91□□□□□ -0.98
CTNND1-223ENST00000529986 CCT4P50991 539 aaKnown RBP8.91□□□□□ -0.98
CTNND1-223ENST00000529986 CEP135Q66GS9 1140 aa8.91□□□□□ -0.98
CTNND1-223ENST00000529986 RAPGEF4Q8WZA2 1011 aa8.91□□□□□ -0.98
CTNND1-223ENST00000529986 TFIP11Q9UBB9 837 aaKnown RBP8.91□□□□□ -0.98
CTNND1-223ENST00000529986 FAM69CQ0P6D2 419 aa8.91□□□□□ -0.98
CTNND1-223ENST00000529986 HCLS1P14317 486 aaPredicted RBP8.91□□□□□ -0.98
CTNND1-223ENST00000529986 BMS1Q14692 1282 aaKnown RBP8.91□□□□□ -0.98
CTNND1-223ENST00000529986 CCDC158Q5M9N0 1113 aa8.91□□□□□ -0.98
CTNND1-223ENST00000529986 ISM2Q6H9L7 571 aa8.91□□□□□ -0.98
CTNND1-223ENST00000529986 NLRP2Q9NX02 1062 aa8.91□□□□□ -0.98
CTNND1-223ENST00000529986 SNW1Q13573 536 aaKnown RBP8.91□□□□□ -0.98
CTNND1-223ENST00000529986 MAP9Q49MG5 647 aa8.91□□□□□ -0.98
CTNND1-223ENST00000529986 AFAP1Q8N556 730 aa8.91□□□□□ -0.98
CTNND1-223ENST00000529986 ERBINQ96RT1 1412 aa8.91□□□□□ -0.98
CTNND1-223ENST00000529986 SULT6B1Q6IMI4 303 aa8.9□□□□□ -0.98
CTNND1-223ENST00000529986 SRCIN1Q9C0H9 1055 aa8.9□□□□□ -0.98
CTNND1-223ENST00000529986 GOPCQ9HD26 462 aa8.9□□□□□ -0.98
CTNND1-223ENST00000529986 RNF216Q9NWF9 866 aaPredicted RBP8.9□□□□□ -0.98
CTNND1-223ENST00000529986 CTR9Q6PD62 1173 aa8.9□□□□□ -0.98
CTNND1-223ENST00000529986 KRT222Q8N1A0 295 aa8.9□□□□□ -0.98
CTNND1-223ENST00000529986 ATP2B2Q01814 1243 aa8.9□□□□□ -0.98
CTNND1-223ENST00000529986 TMEM132AQ24JP5 1023 aa8.9□□□□□ -0.98
CTNND1-223ENST00000529986 DNAAF4Q8WXU2 420 aa8.9□□□□□ -0.98
CTNND1-223ENST00000529986 RSPH14Q9UHP6 348 aa8.9□□□□□ -0.98
CTNND1-223ENST00000529986 NLRP6P59044 892 aa8.9□□□□□ -0.99
CTNND1-223ENST00000529986 GIMAP6Q6P9H5 292 aa8.9□□□□□ -0.99
CTNND1-223ENST00000529986 TXLNBQ8N3L3 684 aa8.9□□□□□ -0.99
CTNND1-223ENST00000529986 PRIMPOLQ96LW4 560 aa8.9□□□□□ -0.99
CTNND1-223ENST00000529986 SPINK5Q9NQ38 1064 aaPredicted RBP8.9□□□□□ -0.99
CTNND1-223ENST00000529986 IFFO1Q0D2I5 559 aa8.89□□□□□ -0.99
CTNND1-223ENST00000529986 NOLC1Q14978 699 aaKnown RBP eCLIP8.89□□□□□ -0.99
CTNND1-223ENST00000529986 ANKRD18AQ8IVF6 992 aa8.89□□□□□ -0.99
CTNND1-223ENST00000529986 ZNF526Q8TF50 670 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-223ENST00000529986 THUMPD2Q9BTF0 503 aaKnown RBP8.89□□□□□ -0.99
CTNND1-223ENST00000529986 CNNM1Q9NRU3 951 aa8.89□□□□□ -0.99
CTNND1-223ENST00000529986 ABCC5O15440 1437 aa8.89□□□□□ -0.99
CTNND1-223ENST00000529986 PPFIA3O75145 1194 aa8.89□□□□□ -0.99
CTNND1-223ENST00000529986 EZRP15311 586 aaKnown RBP8.89□□□□□ -0.99
CTNND1-223ENST00000529986 MCM5P33992 734 aa8.89□□□□□ -0.99
CTNND1-223ENST00000529986 SPA17Q15506 151 aa8.89□□□□□ -0.99
CTNND1-223ENST00000529986 LUZP1Q86V48 1076 aa8.89□□□□□ -0.99
CTNND1-223ENST00000529986 ARHGEF11O15085 1522 aa8.89□□□□□ -0.99
CTNND1-223ENST00000529986 GBP2P32456 591 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-223ENST00000529986 CCDC178Q5BJE1 867 aa8.89□□□□□ -0.99
CTNND1-223ENST00000529986 NOL7Q9UMY1 257 aaKnown RBP8.89□□□□□ -0.99
CTNND1-223ENST00000529986 SSR1P43307 286 aaKnown RBP8.89□□□□□ -0.99
CTNND1-223ENST00000529986 DNAJC5BQ9UF47 199 aa8.89□□□□□ -0.99
CTNND1-223ENST00000529986 MYL6BP14649 208 aa8.88□□□□□ -0.99
CTNND1-223ENST00000529986 MATR3P43243 847 aaKnown RBP eCLIP8.88□□□□□ -0.996e-7■■■■□ 22.1
CTNND1-223ENST00000529986 GAS2L2Q8NHY3 880 aa8.88□□□□□ -0.99
CTNND1-223ENST00000529986 SLC26A8Q96RN1 970 aa8.88□□□□□ -0.99
CTNND1-223ENST00000529986 SCAND2PQ9GZW5 306 aaPredicted RBP8.88□□□□□ -0.99
CTNND1-223ENST00000529986 TTC12Q9H892 705 aaPredicted RBP8.88□□□□□ -0.99
CTNND1-223ENST00000529986 UBE4AQ14139 1066 aa8.88□□□□□ -0.99
CTNND1-223ENST00000529986 IGHDP01880 384 aa8.88□□□□□ -0.99
CTNND1-223ENST00000529986 KLHL40Q2TBA0 621 aa8.88□□□□□ -0.99
CTNND1-223ENST00000529986 MICALCLQ6ZW33 695 aa8.88□□□□□ -0.99
CTNND1-223ENST00000529986 NUP88Q99567 741 aaPredicted RBP8.88□□□□□ -0.99
CTNND1-223ENST00000529986 MIS18AQ9NYP9 233 aa8.88□□□□□ -0.99
CTNND1-223ENST00000529986 MX1P20591 662 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms