RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 HMGB2P26583 209 aaKnown RBP16.86■□□□□ 0.29
CCDC90B-216ENST00000529856 SIK1P57059 783 aa16.86■□□□□ 0.29
CCDC90B-216ENST00000529856 IL17REQ8NFR9 667 aa16.86■□□□□ 0.29
CCDC90B-216ENST00000529856 PLEKHF1Q96S99 279 aa16.86■□□□□ 0.29
CCDC90B-216ENST00000529856 PNNQ9H307 717 aaKnown RBP16.86■□□□□ 0.29
CCDC90B-216ENST00000529856 SLC52A2Q9HAB3 445 aa16.86■□□□□ 0.29
CCDC90B-216ENST00000529856 VIRMAQ69YN4 1812 aaKnown RBP16.86■□□□□ 0.29
CCDC90B-216ENST00000529856 ZNF827Q17R98 1081 aa16.85■□□□□ 0.29
CCDC90B-216ENST00000529856 NEFMP07197 916 aa16.84■□□□□ 0.29
CCDC90B-216ENST00000529856 MRC1P22897 1456 aa16.83■□□□□ 0.28
CCDC90B-216ENST00000529856 PDGFDQ9GZP0 370 aaPredicted RBP16.83■□□□□ 0.28
CCDC90B-216ENST00000529856 ATP6V1AP38606 617 aa16.82■□□□□ 0.28
CCDC90B-216ENST00000529856 RBM42Q9BTD8 480 aaKnown RBP16.82■□□□□ 0.28
CCDC90B-216ENST00000529856 TAF1LQ8IZX4 1826 aa16.82■□□□□ 0.28
CCDC90B-216ENST00000529856 CEMIPQ8WUJ3 1361 aa16.81■□□□□ 0.28
CCDC90B-216ENST00000529856 ANP32CO43423 234 aa16.81■□□□□ 0.28
CCDC90B-216ENST00000529856 HTATSF1O43719 755 aaKnown RBP16.81■□□□□ 0.28
CCDC90B-216ENST00000529856 SLC4A9Q96Q91 983 aa16.81■□□□□ 0.28
CCDC90B-216ENST00000529856 TFCP2L1Q9NZI6 479 aa16.81■□□□□ 0.28
CCDC90B-216ENST00000529856 C5P01031 1676 aa16.81■□□□□ 0.28
CCDC90B-216ENST00000529856 TEFQ10587 303 aa16.8■□□□□ 0.28
CCDC90B-216ENST00000529856 ITPK1Q13572 414 aa16.8■□□□□ 0.28
CCDC90B-216ENST00000529856 WDR43Q15061 677 aaKnown RBP eCLIP16.8■□□□□ 0.28
CCDC90B-216ENST00000529856 RTF1Q92541 710 aaKnown RBP16.8■□□□□ 0.28
CCDC90B-216ENST00000529856 CASZ1Q86V15 1759 aa16.79■□□□□ 0.28
CCDC90B-216ENST00000529856 MAPK8IP3Q9UPT6 1336 aa16.79■□□□□ 0.28
CCDC90B-216ENST00000529856 PTCD1O75127 700 aaKnown RBP16.79■□□□□ 0.28
CCDC90B-216ENST00000529856 SLC39A6Q13433 755 aa16.79■□□□□ 0.28
CCDC90B-216ENST00000529856 NFE2L2Q16236 605 aa16.79■□□□□ 0.28
CCDC90B-216ENST00000529856 LINC00116Q8NCU8 138 aa16.79■□□□□ 0.28
CCDC90B-216ENST00000529856 ADAMTS8Q9UP79 889 aa16.79■□□□□ 0.28
CCDC90B-216ENST00000529856 QSER1Q2KHR3 1735 aa16.79■□□□□ 0.28
CCDC90B-216ENST00000529856 ZNF831Q5JPB2 1677 aa16.78■□□□□ 0.28
CCDC90B-216ENST00000529856 PNPLA7Q6ZV29 1317 aa16.78■□□□□ 0.28
CCDC90B-216ENST00000529856 MCM10Q7L590 875 aa16.78■□□□□ 0.28
CCDC90B-216ENST00000529856 C4BP0C0L5 1744 aa16.77■□□□□ 0.28
CCDC90B-216ENST00000529856 DCTN1Q14203 1278 aa16.77■□□□□ 0.28
CCDC90B-216ENST00000529856 CCDC184Q52MB2 194 aa16.77■□□□□ 0.28
CCDC90B-216ENST00000529856 SPON1Q9HCB6 807 aa16.77■□□□□ 0.28
CCDC90B-216ENST00000529856 LRP5O75197 1615 aa16.77■□□□□ 0.27
CCDC90B-216ENST00000529856 TUBGCP6Q96RT7 1819 aa16.77■□□□□ 0.27
CCDC90B-216ENST00000529856 SIPA1L3O60292 1781 aaPredicted RBP16.77■□□□□ 0.27
CCDC90B-216ENST00000529856 DLG5Q8TDM6 1919 aa16.76■□□□□ 0.27
CCDC90B-216ENST00000529856 SRCAPQ6ZRS2 3230 aa16.76■□□□□ 0.27
CCDC90B-216ENST00000529856 ZBTB7AO95365 584 aa16.76■□□□□ 0.27
CCDC90B-216ENST00000529856 MAPK8IP2Q13387 824 aaPredicted RBP16.76■□□□□ 0.27
CCDC90B-216ENST00000529856 AK7Q96M32 723 aa16.76■□□□□ 0.27
CCDC90B-216ENST00000529856 COL23A1Q86Y22 540 aaPredicted RBP16.75■□□□□ 0.27
CCDC90B-216ENST00000529856 CCDC146Q8IYE0 955 aa16.75■□□□□ 0.27
CCDC90B-216ENST00000529856 RUNDC1Q96C34 613 aa16.75■□□□□ 0.27
CCDC90B-216ENST00000529856 TMPOP42166 694 aaKnown RBP16.74■□□□□ 0.27
CCDC90B-216ENST00000529856 RC3H1Q5TC82 1133 aaKnown RBP16.74■□□□□ 0.27
CCDC90B-216ENST00000529856 ZNF790Q6PG37 636 aa16.74■□□□□ 0.27
CCDC90B-216ENST00000529856 FLAD1Q8NFF5 587 aa16.74■□□□□ 0.27
CCDC90B-216ENST00000529856 SLC16A10Q8TF71 515 aa16.74■□□□□ 0.27
CCDC90B-216ENST00000529856 MTFR1LQ9H019 292 aa16.74■□□□□ 0.27
CCDC90B-216ENST00000529856 ATF5Q9Y2D1 282 aaPredicted RBP16.74■□□□□ 0.27
CCDC90B-216ENST00000529856 BTBD11A6QL63 1104 aa16.73■□□□□ 0.27
CCDC90B-216ENST00000529856 RIPK4P57078 832 aa16.73■□□□□ 0.27
CCDC90B-216ENST00000529856 AMIGO3Q86WK7 504 aa16.73■□□□□ 0.27
CCDC90B-216ENST00000529856 TTC5Q8N0Z6 440 aa16.73■□□□□ 0.27
CCDC90B-216ENST00000529856 VSIG10Q8N0Z9 540 aa16.73■□□□□ 0.27
CCDC90B-216ENST00000529856 KCPQ6ZWJ8 1503 aa16.73■□□□□ 0.27
CCDC90B-216ENST00000529856 CNTNAP4Q9C0A0 1308 aa16.72■□□□□ 0.27
CCDC90B-216ENST00000529856 UBR3Q6ZT12 1888 aa16.72■□□□□ 0.27
CCDC90B-216ENST00000529856 GNPATO15228 680 aa16.72■□□□□ 0.27
CCDC90B-216ENST00000529856 TAF7Q15545 349 aaPredicted RBP16.72■□□□□ 0.27
CCDC90B-216ENST00000529856 DNAJC10Q8IXB1 793 aa16.72■□□□□ 0.27
CCDC90B-216ENST00000529856 COL5A3P25940 1745 aaPredicted RBP16.72■□□□□ 0.27
CCDC90B-216ENST00000529856 UBR2Q8IWV8 1755 aa16.72■□□□□ 0.27
CCDC90B-216ENST00000529856 CICQ96RK0 1608 aaPredicted RBP16.71■□□□□ 0.27
CCDC90B-216ENST00000529856 TJP1Q07157 1748 aa16.71■□□□□ 0.27
CCDC90B-216ENST00000529856 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.71■□□□□ 0.27
CCDC90B-216ENST00000529856 KCNQ3O43525 872 aa16.71■□□□□ 0.27
CCDC90B-216ENST00000529856 SSFA2P28290 1259 aa16.71■□□□□ 0.27
CCDC90B-216ENST00000529856 PTGER2P43116 358 aa16.71■□□□□ 0.27
CCDC90B-216ENST00000529856 SMIM5Q71RC9 77 aa16.71■□□□□ 0.27
CCDC90B-216ENST00000529856 ZNF496Q96IT1 587 aaPredicted RBP16.71■□□□□ 0.27
CCDC90B-216ENST00000529856 PNISRQ8TF01 805 aaKnown RBP16.7■□□□□ 0.26
CCDC90B-216ENST00000529856 THUMPD2Q9BTF0 503 aaKnown RBP16.7■□□□□ 0.26
CCDC90B-216ENST00000529856 MRS2Q9HD23 443 aa16.7■□□□□ 0.26
CCDC90B-216ENST00000529856 MYH14Q7Z406 1995 aaKnown RBP16.69■□□□□ 0.26
CCDC90B-216ENST00000529856 RPS6KA4O75676 772 aa16.69■□□□□ 0.26
CCDC90B-216ENST00000529856 PHF14O94880 888 aa16.69■□□□□ 0.26
CCDC90B-216ENST00000529856 CYP19A1P11511 503 aaPredicted RBP16.69■□□□□ 0.26
CCDC90B-216ENST00000529856 CRKLP46109 303 aaKnown RBP16.69■□□□□ 0.26
CCDC90B-216ENST00000529856 LMOD3Q0VAK6 560 aa16.69■□□□□ 0.26
CCDC90B-216ENST00000529856 INTS5Q6P9B9 1019 aaKnown RBP16.69■□□□□ 0.26
CCDC90B-216ENST00000529856 FMNL2Q96PY5 1086 aa16.69■□□□□ 0.26
CCDC90B-216ENST00000529856 SGIP1Q9BQI5 828 aa16.69■□□□□ 0.26
CCDC90B-216ENST00000529856 RRP7AQ9Y3A4 280 aaKnown RBP16.69■□□□□ 0.26
CCDC90B-216ENST00000529856 RTCBQ9Y3I0 505 aaKnown RBP16.69■□□□□ 0.26
CCDC90B-216ENST00000529856 HEG1Q9ULI3 1381 aa16.68■□□□□ 0.26
CCDC90B-216ENST00000529856 NEUROD2Q15784 382 aa16.68■□□□□ 0.26
CCDC90B-216ENST00000529856 TRAPPC3LQ5T215 181 aa16.68■□□□□ 0.26
CCDC90B-216ENST00000529856 MIS18AQ9NYP9 233 aa16.68■□□□□ 0.26
CCDC90B-216ENST00000529856 TEX13AQ9BXU3 409 aaPredicted RBP16.67■□□□□ 0.26
CCDC90B-216ENST00000529856 CCDC87Q9NVE4 849 aa16.67■□□□□ 0.26
CCDC90B-216ENST00000529856 TRIM35Q9UPQ4 493 aa16.67■□□□□ 0.26
CCDC90B-216ENST00000529856 COL24A1Q17RW2 1714 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms