RNA–Protein interactions for RNA: ENST00000529500.1

PSMC3-206, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

TSL 2

Gene PSMC3, Length 563 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-206ENST00000529500 PTF1AQ7RTS3 328 aa17.8■□□□□ 0.44
PSMC3-206ENST00000529500 IFT57Q9NWB7 429 aa17.8■□□□□ 0.44
PSMC3-206ENST00000529500 SPG7Q9UQ90 795 aa17.8■□□□□ 0.44
PSMC3-206ENST00000529500 WNK3Q9BYP7 1800 aa17.79■□□□□ 0.44
PSMC3-206ENST00000529500 PEAK1Q9H792 1746 aa17.79■□□□□ 0.44
PSMC3-206ENST00000529500 PSDA5PKW4 1024 aaPredicted RBP17.79■□□□□ 0.44
PSMC3-206ENST00000529500 GNAI1P63096 354 aa17.79■□□□□ 0.44
PSMC3-206ENST00000529500 R3HDM1Q15032 1099 aaKnown RBP17.79■□□□□ 0.44
PSMC3-206ENST00000529500 PCDH11XQ9BZA7 1347 aa17.78■□□□□ 0.44
PSMC3-206ENST00000529500 PCDH11YQ9BZA8 1340 aa17.78■□□□□ 0.44
PSMC3-206ENST00000529500 ALDH1L2Q3SY69 923 aa17.78■□□□□ 0.44
PSMC3-206ENST00000529500 TSR2Q969E8 191 aaKnown RBP17.78■□□□□ 0.44
PSMC3-206ENST00000529500 SYTL4Q96C24 671 aaPredicted RBP17.78■□□□□ 0.44
PSMC3-206ENST00000529500 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.78■□□□□ 0.446e-6■□□□□ 8.9
PSMC3-206ENST00000529500 ZNF853P0CG23 659 aa17.77■□□□□ 0.44
PSMC3-206ENST00000529500 PRIM1P49642 420 aaKnown RBP17.77■□□□□ 0.44
PSMC3-206ENST00000529500 BRPF1P55201 1214 aaPredicted RBP17.77■□□□□ 0.44
PSMC3-206ENST00000529500 ZKSCAN2Q63HK3 967 aa17.77■□□□□ 0.44
PSMC3-206ENST00000529500 TNS1Q9HBL0 1735 aaKnown RBP17.77■□□□□ 0.44
PSMC3-206ENST00000529500 MEGF6O75095 1541 aa17.77■□□□□ 0.43
PSMC3-206ENST00000529500 TXNRD1Q16881 649 aa17.76■□□□□ 0.43
PSMC3-206ENST00000529500 KAT6BQ8WYB5 2073 aa17.76■□□□□ 0.43
PSMC3-206ENST00000529500 SULT6B1Q6IMI4 303 aa17.75■□□□□ 0.43
PSMC3-206ENST00000529500 PROM2Q8N271 834 aa17.75■□□□□ 0.43
PSMC3-206ENST00000529500 FRAT1Q92837 279 aaPredicted RBP17.75■□□□□ 0.43
PSMC3-206ENST00000529500 CLUAP1Q96AJ1 413 aa17.75■□□□□ 0.43
PSMC3-206ENST00000529500 KDRP35968 1356 aa17.75■□□□□ 0.43
PSMC3-206ENST00000529500 KIF16BQ96L93 1317 aa17.74■□□□□ 0.43
PSMC3-206ENST00000529500 SMC4Q9NTJ3 1288 aa17.74■□□□□ 0.43
PSMC3-206ENST00000529500 IGSF1Q8N6C5 1336 aa17.73■□□□□ 0.43
PSMC3-206ENST00000529500 SBF2Q86WG5 1849 aa17.73■□□□□ 0.43
PSMC3-206ENST00000529500 IPO8O15397 1037 aaKnown RBP17.73■□□□□ 0.43
PSMC3-206ENST00000529500 CYP27B1O15528 508 aa17.73■□□□□ 0.43
PSMC3-206ENST00000529500 PLEKHO1Q53GL0 409 aaPredicted RBP17.73■□□□□ 0.43
PSMC3-206ENST00000529500 IFNL2Q8IZJ0 200 aa17.73■□□□□ 0.43
PSMC3-206ENST00000529500 PANK1Q8TE04 598 aa17.73■□□□□ 0.43
PSMC3-206ENST00000529500 CFAP44Q96MT7 982 aa17.73■□□□□ 0.43
PSMC3-206ENST00000529500 RGPD2P0DJD1 1756 aa17.73■□□□□ 0.43
PSMC3-206ENST00000529500 NCAPD2Q15021 1401 aa17.72■□□□□ 0.43
PSMC3-206ENST00000529500 HMGB2P26583 209 aaKnown RBP17.72■□□□□ 0.43
PSMC3-206ENST00000529500 AMOTQ4VCS5 1084 aa17.72■□□□□ 0.43
PSMC3-206ENST00000529500 SSH1Q8WYL5 1049 aa17.72■□□□□ 0.43
PSMC3-206ENST00000529500 STK32BQ9NY57 414 aa17.72■□□□□ 0.43
PSMC3-206ENST00000529500 PLEKHG2Q9H7P9 1386 aa17.71■□□□□ 0.43
PSMC3-206ENST00000529500 SLC27A3Q5K4L6 730 aa17.71■□□□□ 0.43
PSMC3-206ENST00000529500 DZIP1LQ8IYY4 767 aaKnown RBP17.71■□□□□ 0.43
PSMC3-206ENST00000529500 COG6Q9Y2V7 657 aa17.71■□□□□ 0.43
PSMC3-206ENST00000529500 NKX1-1Q15270 411 aaPredicted RBP17.7■□□□□ 0.42
PSMC3-206ENST00000529500 AEBP1Q8IUX7 1158 aa17.7■□□□□ 0.42
PSMC3-206ENST00000529500 MVPQ14764 893 aaKnown RBP17.69■□□□□ 0.42
PSMC3-206ENST00000529500 ATF7IPQ6VMQ6 1270 aa17.69■□□□□ 0.42
PSMC3-206ENST00000529500 HTATSF1O43719 755 aaKnown RBP17.68■□□□□ 0.42
PSMC3-206ENST00000529500 HSP90AB1P08238 724 aaKnown RBP17.68■□□□□ 0.42
PSMC3-206ENST00000529500 PHKG2P15735 406 aa17.68■□□□□ 0.42
PSMC3-206ENST00000529500 MPRIPQ6WCQ1 1025 aa17.68■□□□□ 0.42
PSMC3-206ENST00000529500 FTSJ3Q8IY81 847 aaKnown RBP17.68■□□□□ 0.42
PSMC3-206ENST00000529500 GAS2L2Q8NHY3 880 aa17.68■□□□□ 0.42
PSMC3-206ENST00000529500 ARHGAP45Q92619 1136 aa17.68■□□□□ 0.42
PSMC3-206ENST00000529500 BCL2L13Q9BXK5 485 aa17.68■□□□□ 0.42
PSMC3-206ENST00000529500 MBIPQ9NS73 344 aa17.68■□□□□ 0.42
PSMC3-206ENST00000529500 VAMP4O75379 141 aa17.67■□□□□ 0.42
PSMC3-206ENST00000529500 RLBP1P12271 317 aa17.67■□□□□ 0.42
PSMC3-206ENST00000529500 SLC15A2Q16348 729 aa17.67■□□□□ 0.42
PSMC3-206ENST00000529500 SMARCC1Q92922 1105 aaPredicted RBP17.67■□□□□ 0.42
PSMC3-206ENST00000529500 NHSQ6T4R5 1651 aa17.67■□□□□ 0.42
PSMC3-206ENST00000529500 TRIM27P14373 513 aa17.66■□□□□ 0.42
PSMC3-206ENST00000529500 DDX19BQ9UMR2 479 aa17.66■□□□□ 0.42
PSMC3-206ENST00000529500 LAS1LQ9Y4W2 734 aaKnown RBP17.66■□□□□ 0.42
PSMC3-206ENST00000529500 CHL1O00533 1208 aa17.65■□□□□ 0.42
PSMC3-206ENST00000529500 C1orf141Q5JVX7 400 aa17.65■□□□□ 0.42
PSMC3-206ENST00000529500 ZNF530Q6P9A1 599 aaPredicted RBP17.65■□□□□ 0.42
PSMC3-206ENST00000529500 THUMPD2Q9BTF0 503 aaKnown RBP17.65■□□□□ 0.42
PSMC3-206ENST00000529500 CHMP4BQ9H444 224 aaKnown RBP17.65■□□□□ 0.42
PSMC3-206ENST00000529500 ANO8Q9HCE9 1232 aaPredicted RBP17.65■□□□□ 0.42
PSMC3-206ENST00000529500 RGPD3A6NKT7 1758 aaPredicted RBP17.65■□□□□ 0.42
PSMC3-206ENST00000529500 RGPD4Q7Z3J3 1758 aa17.65■□□□□ 0.42
PSMC3-206ENST00000529500 DCAF5Q96JK2 942 aa17.64■□□□□ 0.41
PSMC3-206ENST00000529500 TMOD3Q9NYL9 352 aa17.64■□□□□ 0.41
PSMC3-206ENST00000529500 NOB1Q9ULX3 412 aaKnown RBP17.64■□□□□ 0.41
PSMC3-206ENST00000529500 RREB1Q92766 1687 aa17.64■□□□□ 0.41
PSMC3-206ENST00000529500 ERVV-2B6SEH9 535 aa17.63■□□□□ 0.41
PSMC3-206ENST00000529500 MRPL50Q8N5N7 158 aaKnown RBP17.63■□□□□ 0.41
PSMC3-206ENST00000529500 RWDD1Q9H446 243 aaPredicted RBP17.63■□□□□ 0.41
PSMC3-206ENST00000529500 SPON1Q9HCB6 807 aa17.63■□□□□ 0.41
PSMC3-206ENST00000529500 LRRC4BQ9NT99 713 aa17.63■□□□□ 0.41
PSMC3-206ENST00000529500 CCNL1Q9UK58 526 aaPredicted RBP17.63■□□□□ 0.41
PSMC3-206ENST00000529500 PDE4AP27815 886 aa17.62■□□□□ 0.41
PSMC3-206ENST00000529500 TWISTNBQ3B726 338 aaPredicted RBP17.62■□□□□ 0.41
PSMC3-206ENST00000529500 PIGBQ92521 554 aa17.62■□□□□ 0.41
PSMC3-206ENST00000529500 BACH2Q9BYV9 841 aa17.62■□□□□ 0.41
PSMC3-206ENST00000529500 IGHDP01880 384 aa17.61■□□□□ 0.41
PSMC3-206ENST00000529500 RTF1Q92541 710 aaKnown RBP17.61■□□□□ 0.41
PSMC3-206ENST00000529500 TNNQ9UQP3 1299 aa17.61■□□□□ 0.41
PSMC3-206ENST00000529500 NUP188Q5SRE5 1749 aa17.61■□□□□ 0.41
PSMC3-206ENST00000529500 MTHFSDQ2M296 383 aaKnown RBP17.6■□□□□ 0.41
PSMC3-206ENST00000529500 BABAM1Q9NWV8 329 aa17.6■□□□□ 0.41
PSMC3-206ENST00000529500 BTAF1O14981 1849 aa17.6■□□□□ 0.41
PSMC3-206ENST00000529500 CABP4P57796 275 aa17.59■□□□□ 0.41
PSMC3-206ENST00000529500 API5Q9BZZ5 524 aaKnown RBP17.59■□□□□ 0.41
PSMC3-206ENST00000529500 TFCP2L1Q9NZI6 479 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms