RNA–Protein interactions for RNA: ENST00000528653.1

EIF3F-202, Transcript of eukaryotic translation initiation factor 3 subunit F, humanhuman

TSL 2

Gene EIF3F, Length 739 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3F-202ENST00000528653 PAPPAQ13219 1627 aa17.94■□□□□ 0.46
EIF3F-202ENST00000528653 PIGBQ92521 554 aa17.93■□□□□ 0.46
EIF3F-202ENST00000528653 BCL11BQ9C0K0 894 aaPredicted RBP17.93■□□□□ 0.46
EIF3F-202ENST00000528653 NFATC2IPQ8NCF5 419 aa17.92■□□□□ 0.46
EIF3F-202ENST00000528653 HNRNPUQ00839 825 aaKnown RBP eCLIP17.91■□□□□ 0.46
EIF3F-202ENST00000528653 CCDC27Q2M243 656 aa17.91■□□□□ 0.46
EIF3F-202ENST00000528653 KDM3BQ7LBC6 1761 aa17.91■□□□□ 0.46
EIF3F-202ENST00000528653 NCBP3Q53F19 620 aaKnown RBP17.9■□□□□ 0.46
EIF3F-202ENST00000528653 DEFB132Q7Z7B7 95 aa17.9■□□□□ 0.46
EIF3F-202ENST00000528653 WWC1Q8IX03 1113 aa17.9■□□□□ 0.46
EIF3F-202ENST00000528653 NGEFQ8N5V2 710 aa17.89■□□□□ 0.45
EIF3F-202ENST00000528653 UBR2Q8IWV8 1755 aa17.89■□□□□ 0.45
EIF3F-202ENST00000528653 CCDC125Q86Z20 511 aa17.88■□□□□ 0.45
EIF3F-202ENST00000528653 RGPD3A6NKT7 1758 aaPredicted RBP17.88■□□□□ 0.45
EIF3F-202ENST00000528653 RGPD4Q7Z3J3 1758 aa17.88■□□□□ 0.45
EIF3F-202ENST00000528653 PALLDQ8WX93 1383 aa17.88■□□□□ 0.45
EIF3F-202ENST00000528653 LY75O60449 1722 aa17.87■□□□□ 0.45
EIF3F-202ENST00000528653 BTBD11A6QL63 1104 aa17.87■□□□□ 0.45
EIF3F-202ENST00000528653 APBA3O96018 575 aa17.87■□□□□ 0.45
EIF3F-202ENST00000528653 CALD1Q05682 793 aaKnown RBP17.87■□□□□ 0.45
EIF3F-202ENST00000528653 SLC39A6Q13433 755 aa17.87■□□□□ 0.45
EIF3F-202ENST00000528653 SF3B2Q13435 895 aaKnown RBP17.87■□□□□ 0.45
EIF3F-202ENST00000528653 TAF7Q15545 349 aaPredicted RBP17.87■□□□□ 0.45
EIF3F-202ENST00000528653 ATG3Q9NT62 314 aa17.87■□□□□ 0.45
EIF3F-202ENST00000528653 ASAP1Q9ULH1 1129 aa17.87■□□□□ 0.45
EIF3F-202ENST00000528653 KCPQ6ZWJ8 1503 aa17.87■□□□□ 0.45
EIF3F-202ENST00000528653 MIS18AQ9NYP9 233 aa17.86■□□□□ 0.45
EIF3F-202ENST00000528653 LAS1LQ9Y4W2 734 aaKnown RBP17.86■□□□□ 0.45
EIF3F-202ENST00000528653 ZNF521Q96K83 1311 aa17.86■□□□□ 0.45
EIF3F-202ENST00000528653 TSPYL4Q9UJ04 414 aa17.85■□□□□ 0.45
EIF3F-202ENST00000528653 KCNQ3O43525 872 aa17.84■□□□□ 0.45
EIF3F-202ENST00000528653 TTC5Q8N0Z6 440 aa17.84■□□□□ 0.45
EIF3F-202ENST00000528653 SMARCC1Q92922 1105 aaPredicted RBP17.84■□□□□ 0.45
EIF3F-202ENST00000528653 IL16Q14005 1332 aa17.83■□□□□ 0.44
EIF3F-202ENST00000528653 BAG6P46379 1132 aa17.83■□□□□ 0.44
EIF3F-202ENST00000528653 ZNF790Q6PG37 636 aa17.83■□□□□ 0.44
EIF3F-202ENST00000528653 WDR63Q8IWG1 891 aa17.83■□□□□ 0.44
EIF3F-202ENST00000528653 YTHDC1Q96MU7 727 aaKnown RBP17.83■□□□□ 0.44
EIF3F-202ENST00000528653 IFT57Q9NWB7 429 aa17.83■□□□□ 0.44
EIF3F-202ENST00000528653 TJP1Q07157 1748 aa17.82■□□□□ 0.44
EIF3F-202ENST00000528653 PTCD1O75127 700 aaKnown RBP17.82■□□□□ 0.44
EIF3F-202ENST00000528653 GNAI1P63096 354 aa17.82■□□□□ 0.44
EIF3F-202ENST00000528653 EN1Q05925 392 aaPredicted RBP17.82■□□□□ 0.44
EIF3F-202ENST00000528653 CFAP44Q96MT7 982 aa17.82■□□□□ 0.44
EIF3F-202ENST00000528653 RREB1Q92766 1687 aa17.82■□□□□ 0.44
EIF3F-202ENST00000528653 ZBED9Q6R2W3 1325 aa17.81■□□□□ 0.44
EIF3F-202ENST00000528653 CHL1O00533 1208 aa17.81■□□□□ 0.44
EIF3F-202ENST00000528653 ZNF853P0CG23 659 aa17.81■□□□□ 0.44
EIF3F-202ENST00000528653 RBM42Q9BTD8 480 aaKnown RBP17.81■□□□□ 0.44
EIF3F-202ENST00000528653 MBIPQ9NS73 344 aa17.81■□□□□ 0.44
EIF3F-202ENST00000528653 C5P01031 1676 aa17.8■□□□□ 0.44
EIF3F-202ENST00000528653 CICQ96RK0 1608 aaPredicted RBP17.8■□□□□ 0.44
EIF3F-202ENST00000528653 LOC102724428A0A0B4J2F2 783 aa17.8■□□□□ 0.44
EIF3F-202ENST00000528653 PLSCR1O15162 318 aa17.8■□□□□ 0.44
EIF3F-202ENST00000528653 SIK1P57059 783 aa17.8■□□□□ 0.44
EIF3F-202ENST00000528653 TSR2Q969E8 191 aaKnown RBP17.8■□□□□ 0.44
EIF3F-202ENST00000528653 ZNF496Q96IT1 587 aaPredicted RBP17.8■□□□□ 0.44
EIF3F-202ENST00000528653 SPINK5Q9NQ38 1064 aaPredicted RBP17.8■□□□□ 0.44
EIF3F-202ENST00000528653 BABAM1Q9NWV8 329 aa17.8■□□□□ 0.44
EIF3F-202ENST00000528653 ZNF831Q5JPB2 1677 aa17.8■□□□□ 0.44
EIF3F-202ENST00000528653 NUP188Q5SRE5 1749 aa17.79■□□□□ 0.44
EIF3F-202ENST00000528653 GOLGA2Q08379 1002 aa17.79■□□□□ 0.44
EIF3F-202ENST00000528653 EZH2Q15910 746 aaKnown RBP17.79■□□□□ 0.44
EIF3F-202ENST00000528653 TXNRD1Q16881 649 aa17.79■□□□□ 0.44
EIF3F-202ENST00000528653 CCNL1Q9UK58 526 aaPredicted RBP17.79■□□□□ 0.44
EIF3F-202ENST00000528653 FANCIQ9NVI1 1328 aa17.78■□□□□ 0.44
EIF3F-202ENST00000528653 TAF1LQ8IZX4 1826 aa17.78■□□□□ 0.44
EIF3F-202ENST00000528653 KCNQ4P56696 695 aa17.78■□□□□ 0.44
EIF3F-202ENST00000528653 FMNL2Q96PY5 1086 aa17.78■□□□□ 0.44
EIF3F-202ENST00000528653 SLC4A9Q96Q91 983 aa17.78■□□□□ 0.44
EIF3F-202ENST00000528653 CAMKK2Q96RR4 588 aa17.78■□□□□ 0.44
EIF3F-202ENST00000528653 LAMB4A4D0S4 1761 aa17.78■□□□□ 0.44
EIF3F-202ENST00000528653 COL5A3P25940 1745 aaPredicted RBP17.78■□□□□ 0.44
EIF3F-202ENST00000528653 HEG1Q9ULI3 1381 aa17.78■□□□□ 0.44
EIF3F-202ENST00000528653 EIF4A1P60842 406 aaKnown RBP17.77■□□□□ 0.44
EIF3F-202ENST00000528653 CDCA7LQ96GN5 454 aa17.77■□□□□ 0.44
EIF3F-202ENST00000528653 ATP6V1AP38606 617 aa17.76■□□□□ 0.43
EIF3F-202ENST00000528653 KRT24Q2M2I5 525 aa17.76■□□□□ 0.43
EIF3F-202ENST00000528653 PROM2Q8N271 834 aa17.76■□□□□ 0.43
EIF3F-202ENST00000528653 MYH16Q9H6N6 1097 aa17.76■□□□□ 0.43
EIF3F-202ENST00000528653 E9PSI1 815 aa17.75■□□□□ 0.43
EIF3F-202ENST00000528653 ITPK1Q13572 414 aa17.75■□□□□ 0.43
EIF3F-202ENST00000528653 SLC27A3Q5K4L6 730 aa17.75■□□□□ 0.43
EIF3F-202ENST00000528653 LRRC4BQ9NT99 713 aa17.75■□□□□ 0.43
EIF3F-202ENST00000528653 SLFN5Q08AF3 891 aa17.74■□□□□ 0.43
EIF3F-202ENST00000528653 DNAJC10Q8IXB1 793 aa17.74■□□□□ 0.43
EIF3F-202ENST00000528653 C4BP0C0L5 1744 aa17.73■□□□□ 0.43
EIF3F-202ENST00000528653 PRAMEF22A3QJZ6 481 aa17.73■□□□□ 0.43
EIF3F-202ENST00000528653 VSIG10Q8N0Z9 540 aa17.73■□□□□ 0.43
EIF3F-202ENST00000528653 LINC00116Q8NCU8 138 aa17.73■□□□□ 0.43
EIF3F-202ENST00000528653 PSDA5PKW4 1024 aaPredicted RBP17.72■□□□□ 0.43
EIF3F-202ENST00000528653 GIGYF1O75420 1035 aaPredicted RBP17.72■□□□□ 0.43
EIF3F-202ENST00000528653 SNRPA1P09661 255 aaKnown RBP17.72■□□□□ 0.43
EIF3F-202ENST00000528653 MYH14Q7Z406 1995 aaKnown RBP17.7■□□□□ 0.42
EIF3F-202ENST00000528653 ELL2O00472 640 aaPredicted RBP17.7■□□□□ 0.42
EIF3F-202ENST00000528653 EXOSC9Q06265 439 aaKnown RBP17.7■□□□□ 0.42
EIF3F-202ENST00000528653 DUSP27Q5VZP5 1158 aa17.7■□□□□ 0.42
EIF3F-202ENST00000528653 C8orf58Q8NAV2 365 aa17.7■□□□□ 0.42
EIF3F-202ENST00000528653 CYP19A1P11511 503 aaPredicted RBP17.69■□□□□ 0.42
EIF3F-202ENST00000528653 TSPYL6Q8N831 410 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms