RNA–Protein interactions for RNA: ENST00000527446.5

RPS3-209, Transcript of ribosomal protein S3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RPS3, Length 1,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-209ENST00000527446 WDR63Q8IWG1 891 aa16.7■□□□□ 0.26
RPS3-209ENST00000527446 BCL11BQ9C0K0 894 aaPredicted RBP16.7■□□□□ 0.26
RPS3-209ENST00000527446 TEFQ10587 303 aa16.7■□□□□ 0.26
RPS3-209ENST00000527446 TAF7Q15545 349 aaPredicted RBP16.7■□□□□ 0.26
RPS3-209ENST00000527446 SPINK5Q9NQ38 1064 aaPredicted RBP16.7■□□□□ 0.26
RPS3-209ENST00000527446 TMOD3Q9NYL9 352 aa16.7■□□□□ 0.26
RPS3-209ENST00000527446 CHL1O00533 1208 aa16.69■□□□□ 0.26
RPS3-209ENST00000527446 TRIM37O94972 964 aa16.69■□□□□ 0.26
RPS3-209ENST00000527446 IL16Q14005 1332 aa16.69■□□□□ 0.26
RPS3-209ENST00000527446 SYTL4Q96C24 671 aaPredicted RBP16.69■□□□□ 0.26
RPS3-209ENST00000527446 ZBED9Q6R2W3 1325 aa16.68■□□□□ 0.26
RPS3-209ENST00000527446 CFAP44Q96MT7 982 aa16.68■□□□□ 0.26
RPS3-209ENST00000527446 ATG3Q9NT62 314 aa16.68■□□□□ 0.26
RPS3-209ENST00000527446 MIS18AQ9NYP9 233 aa16.68■□□□□ 0.26
RPS3-209ENST00000527446 BTAF1O14981 1849 aa16.67■□□□□ 0.26
RPS3-209ENST00000527446 CALD1Q05682 793 aaKnown RBP16.67■□□□□ 0.26
RPS3-209ENST00000527446 IFT57Q9NWB7 429 aa16.67■□□□□ 0.26
RPS3-209ENST00000527446 BABAM1Q9NWV8 329 aa16.67■□□□□ 0.26
RPS3-209ENST00000527446 ASAP1Q9ULH1 1129 aa16.67■□□□□ 0.26
RPS3-209ENST00000527446 BTBD11A6QL63 1104 aa16.66■□□□□ 0.26
RPS3-209ENST00000527446 KCNQ3O43525 872 aa16.66■□□□□ 0.26
RPS3-209ENST00000527446 SLC39A6Q13433 755 aa16.66■□□□□ 0.26
RPS3-209ENST00000527446 PAPPAQ13219 1627 aa16.66■□□□□ 0.26
RPS3-209ENST00000527446 KDM3BQ7LBC6 1761 aa16.65■□□□□ 0.26
RPS3-209ENST00000527446 TNS1Q9HBL0 1735 aaKnown RBP16.65■□□□□ 0.26
RPS3-209ENST00000527446 CDCA7LQ96GN5 454 aa16.65■□□□□ 0.26
RPS3-209ENST00000527446 GNAI1P63096 354 aa16.64■□□□□ 0.25
RPS3-209ENST00000527446 GOLGA2Q08379 1002 aa16.64■□□□□ 0.25
RPS3-209ENST00000527446 SLFN5Q08AF3 891 aa16.64■□□□□ 0.25
RPS3-209ENST00000527446 ZNF790Q6PG37 636 aa16.64■□□□□ 0.25
RPS3-209ENST00000527446 TRMT2AQ8IZ69 625 aaKnown RBP16.64■□□□□ 0.25
RPS3-209ENST00000527446 MBIPQ9NS73 344 aa16.64■□□□□ 0.25
RPS3-209ENST00000527446 UBR2Q8IWV8 1755 aa16.63■□□□□ 0.25
RPS3-209ENST00000527446 YTHDC1Q96MU7 727 aaKnown RBP16.63■□□□□ 0.25
RPS3-209ENST00000527446 LAS1LQ9Y4W2 734 aaKnown RBP16.63■□□□□ 0.25
RPS3-209ENST00000527446 HEG1Q9ULI3 1381 aa16.62■□□□□ 0.25
RPS3-209ENST00000527446 KCPQ6ZWJ8 1503 aa16.62■□□□□ 0.25
RPS3-209ENST00000527446 TSPYL4Q9UJ04 414 aa16.62■□□□□ 0.25
RPS3-209ENST00000527446 E9PSI1 815 aa16.61■□□□□ 0.25
RPS3-209ENST00000527446 EIF4A1P60842 406 aaKnown RBP16.61■□□□□ 0.25
RPS3-209ENST00000527446 SMARCC1Q92922 1105 aaPredicted RBP16.61■□□□□ 0.25
RPS3-209ENST00000527446 TSR2Q969E8 191 aaKnown RBP16.61■□□□□ 0.25
RPS3-209ENST00000527446 ZNF496Q96IT1 587 aaPredicted RBP16.61■□□□□ 0.25
RPS3-209ENST00000527446 SLC4A9Q96Q91 983 aa16.61■□□□□ 0.25
RPS3-209ENST00000527446 PALLDQ8WX93 1383 aa16.61■□□□□ 0.25
RPS3-209ENST00000527446 FANCIQ9NVI1 1328 aa16.6■□□□□ 0.25
RPS3-209ENST00000527446 PLSCR1O15162 318 aa16.6■□□□□ 0.25
RPS3-209ENST00000527446 APBA3O96018 575 aa16.6■□□□□ 0.25
RPS3-209ENST00000527446 LY75O60449 1722 aa16.59■□□□□ 0.25
RPS3-209ENST00000527446 DUSP27Q5VZP5 1158 aa16.59■□□□□ 0.25
RPS3-209ENST00000527446 CCDC125Q86Z20 511 aa16.59■□□□□ 0.25
RPS3-209ENST00000527446 PROM2Q8N271 834 aa16.59■□□□□ 0.25
RPS3-209ENST00000527446 UPF1Q92900 1129 aaKnown RBP eCLIP16.59■□□□□ 0.25
RPS3-209ENST00000527446 PTCD1O75127 700 aaKnown RBP16.58■□□□□ 0.24
RPS3-209ENST00000527446 KRT24Q2M2I5 525 aa16.58■□□□□ 0.24
RPS3-209ENST00000527446 TTC5Q8N0Z6 440 aa16.58■□□□□ 0.24
RPS3-209ENST00000527446 MYH16Q9H6N6 1097 aa16.58■□□□□ 0.24
RPS3-209ENST00000527446 LOC102724428A0A0B4J2F2 783 aa16.57■□□□□ 0.24
RPS3-209ENST00000527446 SIK1P57059 783 aa16.57■□□□□ 0.24
RPS3-209ENST00000527446 FMNL2Q96PY5 1086 aa16.57■□□□□ 0.24
RPS3-209ENST00000527446 CAMKK2Q96RR4 588 aa16.57■□□□□ 0.24
RPS3-209ENST00000527446 ZNF831Q5JPB2 1677 aa16.57■□□□□ 0.24
RPS3-209ENST00000527446 RGPD3A6NKT7 1758 aaPredicted RBP16.56■□□□□ 0.24
RPS3-209ENST00000527446 RGPD4Q7Z3J3 1758 aa16.56■□□□□ 0.24
RPS3-209ENST00000527446 GIGYF1O75420 1035 aaPredicted RBP16.56■□□□□ 0.24
RPS3-209ENST00000527446 VSIG10Q8N0Z9 540 aa16.56■□□□□ 0.24
RPS3-209ENST00000527446 C8orf58Q8NAV2 365 aa16.56■□□□□ 0.24
RPS3-209ENST00000527446 PRAMEF22A3QJZ6 481 aa16.55■□□□□ 0.24
RPS3-209ENST00000527446 ITPK1Q13572 414 aa16.55■□□□□ 0.24
RPS3-209ENST00000527446 TSPYL6Q8N831 410 aa16.55■□□□□ 0.24
RPS3-209ENST00000527446 RBM42Q9BTD8 480 aaKnown RBP16.55■□□□□ 0.24
RPS3-209ENST00000527446 LRRC4BQ9NT99 713 aa16.55■□□□□ 0.24
RPS3-209ENST00000527446 CICQ96RK0 1608 aaPredicted RBP16.55■□□□□ 0.24
RPS3-209ENST00000527446 KCNQ4P56696 695 aa16.54■□□□□ 0.24
RPS3-209ENST00000527446 EN1Q05925 392 aaPredicted RBP16.54■□□□□ 0.24
RPS3-209ENST00000527446 EXOSC9Q06265 439 aaKnown RBP16.54■□□□□ 0.24
RPS3-209ENST00000527446 TXNRD1Q16881 649 aa16.54■□□□□ 0.24
RPS3-209ENST00000527446 DEFB132Q7Z7B7 95 aa16.54■□□□□ 0.24
RPS3-209ENST00000527446 TJP1Q07157 1748 aa16.54■□□□□ 0.24
RPS3-209ENST00000527446 SNRPA1P09661 255 aaKnown RBP16.53■□□□□ 0.24
RPS3-209ENST00000527446 SLC27A3Q5K4L6 730 aa16.53■□□□□ 0.24
RPS3-209ENST00000527446 DNAJC10Q8IXB1 793 aa16.53■□□□□ 0.24
RPS3-209ENST00000527446 C5P01031 1676 aa16.52■□□□□ 0.24
RPS3-209ENST00000527446 ATP6V1AP38606 617 aa16.52■□□□□ 0.24
RPS3-209ENST00000527446 SF3B2Q13435 895 aaKnown RBP16.52■□□□□ 0.24
RPS3-209ENST00000527446 EZH2Q15910 746 aaKnown RBP16.52■□□□□ 0.24
RPS3-209ENST00000527446 CCNL1Q9UK58 526 aaPredicted RBP16.52■□□□□ 0.24
RPS3-209ENST00000527446 USP16Q9Y5T5 823 aa16.52■□□□□ 0.24
RPS3-209ENST00000527446 ELL2O00472 640 aaPredicted RBP16.51■□□□□ 0.23
RPS3-209ENST00000527446 VAMP4O75379 141 aa16.51■□□□□ 0.23
RPS3-209ENST00000527446 HOXB7P09629 217 aa16.51■□□□□ 0.23
RPS3-209ENST00000527446 BAG6P46379 1132 aa16.51■□□□□ 0.23
RPS3-209ENST00000527446 TAF1LQ8IZX4 1826 aa16.51■□□□□ 0.23
RPS3-209ENST00000527446 CYP19A1P11511 503 aaPredicted RBP16.5■□□□□ 0.23
RPS3-209ENST00000527446 LINC00116Q8NCU8 138 aa16.5■□□□□ 0.23
RPS3-209ENST00000527446 COL5A3P25940 1745 aaPredicted RBP16.5■□□□□ 0.23
RPS3-209ENST00000527446 SOS1Q07889 1333 aaPredicted RBP16.5■□□□□ 0.23
RPS3-209ENST00000527446 MYH14Q7Z406 1995 aaKnown RBP16.5■□□□□ 0.23
RPS3-209ENST00000527446 TWISTNBQ3B726 338 aaPredicted RBP16.49■□□□□ 0.23
RPS3-209ENST00000527446 TEX13AQ9BXU3 409 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms