RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 PIK3R4Q99570 1358 aa15.34■□□□□ 0.05
CAPN1-208ENST00000527323 CDC42BPGQ6DT37 1551 aa15.34■□□□□ 0.05
CAPN1-208ENST00000527323 SMARCA5O60264 1052 aaPredicted RBP15.34■□□□□ 0.05
CAPN1-208ENST00000527323 ST18O60284 1047 aa15.34■□□□□ 0.05
CAPN1-208ENST00000527323 PRPF40AO75400 957 aaKnown RBP15.34■□□□□ 0.05
CAPN1-208ENST00000527323 LRRC7Q96NW7 1537 aa15.34■□□□□ 0.05
CAPN1-208ENST00000527323 ZNF142P52746 1687 aaPredicted RBP15.34■□□□□ 0.05
CAPN1-208ENST00000527323 XRN1Q8IZH2 1706 aaKnown RBP15.34■□□□□ 0.05
CAPN1-208ENST00000527323 CLEC17AQ6ZS10 378 aa15.34■□□□□ 0.05
CAPN1-208ENST00000527323 PPP1R9BQ96SB3 815 aa15.34■□□□□ 0.05
CAPN1-208ENST00000527323 PKP1Q13835 747 aa15.33■□□□□ 0.05
CAPN1-208ENST00000527323 KIAA1211Q6ZU35 1233 aa15.33■□□□□ 0.05
CAPN1-208ENST00000527323 MCM10Q7L590 875 aa15.33■□□□□ 0.05
CAPN1-208ENST00000527323 ADGRL3Q9HAR2 1447 aa15.33■□□□□ 0.05
CAPN1-208ENST00000527323 STRCP1A6NGW2 1772 aa15.33■□□□□ 0.05
CAPN1-208ENST00000527323 KNDC1Q76NI1 1749 aa15.33■□□□□ 0.04
CAPN1-208ENST00000527323 ADRA2BP18089 450 aa15.32■□□□□ 0.04
CAPN1-208ENST00000527323 SDSP20132 328 aa15.32■□□□□ 0.04
CAPN1-208ENST00000527323 FOXD4L5Q5VV16 416 aaPredicted RBP15.32■□□□□ 0.04
CAPN1-208ENST00000527323 FOXD4L4Q8WXT5 416 aaPredicted RBP15.32■□□□□ 0.04
CAPN1-208ENST00000527323 AXIN2Q9Y2T1 843 aa15.32■□□□□ 0.04
CAPN1-208ENST00000527323 TPM2P07951 284 aa15.32■□□□□ 0.04
CAPN1-208ENST00000527323 ZSCAN23Q3MJ62 389 aa15.32■□□□□ 0.04
CAPN1-208ENST00000527323 ZGPATQ8N5A5 531 aaKnown RBP15.32■□□□□ 0.04
CAPN1-208ENST00000527323 CWC22Q9HCG8 908 aaKnown RBP15.32■□□□□ 0.04
CAPN1-208ENST00000527323 LMBRD1Q9NUN5 540 aa15.32■□□□□ 0.04
CAPN1-208ENST00000527323 ANKRD44Q8N8A2 993 aa15.31■□□□□ 0.04
CAPN1-208ENST00000527323 KRT24Q2M2I5 525 aa15.31■□□□□ 0.04
CAPN1-208ENST00000527323 EYA1Q99502 592 aa15.31■□□□□ 0.04
CAPN1-208ENST00000527323 SLAIN2Q9P270 581 aa15.31■□□□□ 0.04
CAPN1-208ENST00000527323 GCP02774 474 aa15.3■□□□□ 0.04
CAPN1-208ENST00000527323 RPAP2Q8IXW5 612 aaPredicted RBP15.3■□□□□ 0.04
CAPN1-208ENST00000527323 ZNF445P59923 1031 aa15.3■□□□□ 0.04
CAPN1-208ENST00000527323 REC8O95072 547 aa15.3■□□□□ 0.04
CAPN1-208ENST00000527323 RBM27Q9P2N5 1060 aaKnown RBP15.3■□□□□ 0.04
CAPN1-208ENST00000527323 BRINP3Q76B58 766 aa15.29■□□□□ 0.04
CAPN1-208ENST00000527323 RBSNQ9H1K0 784 aa15.29■□□□□ 0.04
CAPN1-208ENST00000527323 PRIM1P49642 420 aaKnown RBP15.29■□□□□ 0.04
CAPN1-208ENST00000527323 ITSN1Q15811 1721 aa15.29■□□□□ 0.04
CAPN1-208ENST00000527323 HOXC9P31274 260 aa15.28■□□□□ 0.04
CAPN1-208ENST00000527323 CEP85Q6P2H3 762 aa15.28■□□□□ 0.04
CAPN1-208ENST00000527323 MSH6P52701 1360 aa15.28■□□□□ 0.04
CAPN1-208ENST00000527323 CADPS2Q86UW7 1296 aa15.28■□□□□ 0.04
CAPN1-208ENST00000527323 IBTKQ9P2D0 1353 aaPredicted RBP15.28■□□□□ 0.04
CAPN1-208ENST00000527323 C1orf167Q5SNV9 1468 aa15.28■□□□□ 0.04
CAPN1-208ENST00000527323 KIF20BQ96Q89 1820 aa15.27■□□□□ 0.04
CAPN1-208ENST00000527323 SLC4A10Q6U841 1118 aa15.27■□□□□ 0.04
CAPN1-208ENST00000527323 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.27■□□□□ 0.04
CAPN1-208ENST00000527323 NECTIN2Q92692 538 aa15.27■□□□□ 0.04
CAPN1-208ENST00000527323 CHAMP1Q96JM3 812 aa15.27■□□□□ 0.04
CAPN1-208ENST00000527323 STRCQ7RTU9 1775 aa15.27■□□□□ 0.04
CAPN1-208ENST00000527323 CYP2E1P05181 493 aaPredicted RBP15.27■□□□□ 0.03
CAPN1-208ENST00000527323 NBPF6Q5VWK0 638 aa15.27■□□□□ 0.03
CAPN1-208ENST00000527323 NBPF4Q96M43 638 aa15.27■□□□□ 0.03
CAPN1-208ENST00000527323 MEIS3Q99687 375 aa15.27■□□□□ 0.03
CAPN1-208ENST00000527323 ERC2O15083 957 aa15.26■□□□□ 0.03
CAPN1-208ENST00000527323 OFD1O75665 1012 aa15.26■□□□□ 0.03
CAPN1-208ENST00000527323 NEK4P51957 841 aa15.26■□□□□ 0.03
CAPN1-208ENST00000527323 R3HCC1Q9Y3T6 440 aaKnown RBP15.26■□□□□ 0.03
CAPN1-208ENST00000527323 AK9Q5TCS8 1911 aa15.25■□□□□ 0.03
CAPN1-208ENST00000527323 OVOS2A0A0J9YW53 1432 aa15.25■□□□□ 0.03
CAPN1-208ENST00000527323 OVOS2Q6IE36 1432 aa15.25■□□□□ 0.03
CAPN1-208ENST00000527323 NOL8Q76FK4 1167 aaKnown RBP15.25■□□□□ 0.03
CAPN1-208ENST00000527323 GPT2Q8TD30 523 aa15.25■□□□□ 0.03
CAPN1-208ENST00000527323 KIF24Q5T7B8 1368 aa15.25■□□□□ 0.03
CAPN1-208ENST00000527323 SSH2Q76I76 1423 aa15.25■□□□□ 0.03
CAPN1-208ENST00000527323 HMMRO75330 724 aa15.25■□□□□ 0.03
CAPN1-208ENST00000527323 SLC4A2P04920 1241 aa15.25■□□□□ 0.03
CAPN1-208ENST00000527323 CSB-PGBD3P0DP91 1061 aa15.25■□□□□ 0.03
CAPN1-208ENST00000527323 SYCE3A1L190 88 aa15.24■□□□□ 0.03
CAPN1-208ENST00000527323 TTC21AQ8NDW8 1320 aa15.24■□□□□ 0.03
CAPN1-208ENST00000527323 RBM10P98175 930 aaKnown RBP15.24■□□□□ 0.03
CAPN1-208ENST00000527323 MTHFSDQ2M296 383 aaKnown RBP15.24■□□□□ 0.03
CAPN1-208ENST00000527323 ZMYND15Q9H091 742 aa15.24■□□□□ 0.03
CAPN1-208ENST00000527323 STRN4Q9NRL3 753 aa15.24■□□□□ 0.03
CAPN1-208ENST00000527323 ZDHHC9Q9Y397 364 aa15.24■□□□□ 0.03
CAPN1-208ENST00000527323 NLRP2Q9NX02 1062 aa15.23■□□□□ 0.03
CAPN1-208ENST00000527323 GOLGB1Q14789 3259 aaKnown RBP15.23■□□□□ 0.03
CAPN1-208ENST00000527323 RNF214Q8ND24 703 aa15.23■□□□□ 0.03
CAPN1-208ENST00000527323 MON2Q7Z3U7 1717 aa15.23■□□□□ 0.03
CAPN1-208ENST00000527323 AKAP12Q02952 1782 aa15.22■□□□□ 0.03
CAPN1-208ENST00000527323 FMN2Q9NZ56 1722 aa15.22■□□□□ 0.03
CAPN1-208ENST00000527323 ANKRD26Q9UPS8 1709 aa15.22■□□□□ 0.03
CAPN1-208ENST00000527323 NUTM2BA6NNL0 878 aaPredicted RBP15.22■□□□□ 0.03
CAPN1-208ENST00000527323 NUTM2EB1AL46 878 aaPredicted RBP15.22■□□□□ 0.03
CAPN1-208ENST00000527323 NUTM2AQ8IVF1 878 aaPredicted RBP15.22■□□□□ 0.03
CAPN1-208ENST00000527323 MST1RQ04912 1400 aa15.22■□□□□ 0.03
CAPN1-208ENST00000527323 FOXD4L6Q3SYB3 417 aaPredicted RBP15.22■□□□□ 0.03
CAPN1-208ENST00000527323 FOXD4L3Q6VB84 417 aaPredicted RBP15.22■□□□□ 0.03
CAPN1-208ENST00000527323 PDCL3Q9H2J4 239 aa15.22■□□□□ 0.03
CAPN1-208ENST00000527323 TMEM63CQ9P1W3 806 aa15.22■□□□□ 0.03
CAPN1-208ENST00000527323 PIK3C2AO00443 1686 aa15.22■□□□□ 0.03
CAPN1-208ENST00000527323 RTL1A6NKG5 1358 aa15.21■□□□□ 0.03
CAPN1-208ENST00000527323 HS1BP3Q53T59 392 aa15.21■□□□□ 0.03
CAPN1-208ENST00000527323 TSHZ3Q63HK5 1081 aa15.21■□□□□ 0.03
CAPN1-208ENST00000527323 NOL7Q9UMY1 257 aaKnown RBP15.21■□□□□ 0.03
CAPN1-208ENST00000527323 F6X3S4 739 aa15.21■□□□□ 0.03
CAPN1-208ENST00000527323 CHL1O00533 1208 aa15.21■□□□□ 0.03
CAPN1-208ENST00000527323 LRSAM1Q6UWE0 723 aa15.21■□□□□ 0.03
CAPN1-208ENST00000527323 TMX3Q96JJ7 454 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms