RNA–Protein interactions for RNA: ENST00000527133.2

CLNS1A-207, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-207ENST00000527133 N4BP2Q86UW6 1770 aaPredicted RBP18.1■□□□□ 0.49
CLNS1A-207ENST00000527133 KIAA1551Q9HCM1 1747 aa18.1■□□□□ 0.49
CLNS1A-207ENST00000527133 TOMM70O94826 608 aa18.1■□□□□ 0.49
CLNS1A-207ENST00000527133 PHKG2P15735 406 aa18.1■□□□□ 0.49
CLNS1A-207ENST00000527133 TGFB2P61812 414 aa18.1■□□□□ 0.49
CLNS1A-207ENST00000527133 CDCA8Q53HL2 280 aa18.1■□□□□ 0.49
CLNS1A-207ENST00000527133 IFNL2Q8IZJ0 200 aa18.1■□□□□ 0.49
CLNS1A-207ENST00000527133 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.1■□□□□ 0.491e-8■■■□□ 17.5
CLNS1A-207ENST00000527133 KIF13BQ9NQT8 1826 aa18.09■□□□□ 0.49
CLNS1A-207ENST00000527133 TRAPPC3LQ5T215 181 aa18.09■□□□□ 0.49
CLNS1A-207ENST00000527133 ARHGAP27Q6ZUM4 889 aa18.09■□□□□ 0.49
CLNS1A-207ENST00000527133 RTCBQ9Y3I0 505 aaKnown RBP18.09■□□□□ 0.49
CLNS1A-207ENST00000527133 C10orf71Q711Q0 1435 aa18.08■□□□□ 0.49
CLNS1A-207ENST00000527133 WASHC2AQ641Q2 1341 aa18.08■□□□□ 0.49
CLNS1A-207ENST00000527133 NLGN1Q8N2Q7 840 aa18.08■□□□□ 0.48
CLNS1A-207ENST00000527133 NMRK2Q9NPI5 230 aa18.08■□□□□ 0.48
CLNS1A-207ENST00000527133 ANKRD26Q9UPS8 1709 aa18.08■□□□□ 0.48
CLNS1A-207ENST00000527133 DNAJC5GQ8N7S2 189 aa18.07■□□□□ 0.48
CLNS1A-207ENST00000527133 KDRP35968 1356 aa18.06■□□□□ 0.48
CLNS1A-207ENST00000527133 FCHSD2O94868 740 aa18.06■□□□□ 0.48
CLNS1A-207ENST00000527133 DPEP1P16444 411 aa18.06■□□□□ 0.48
CLNS1A-207ENST00000527133 RBM42Q9BTD8 480 aaKnown RBP18.06■□□□□ 0.48
CLNS1A-207ENST00000527133 CCDC87Q9NVE4 849 aa18.06■□□□□ 0.48
CLNS1A-207ENST00000527133 ARHGEF1Q92888 912 aaKnown RBP18.05■□□□□ 0.48
CLNS1A-207ENST00000527133 SLC4A9Q96Q91 983 aa18.05■□□□□ 0.48
CLNS1A-207ENST00000527133 PCNTO95613 3336 aa18.05■□□□□ 0.48
CLNS1A-207ENST00000527133 GYS1P13807 737 aa18.04■□□□□ 0.48
CLNS1A-207ENST00000527133 C4AP0C0L4 1744 aa18.03■□□□□ 0.48
CLNS1A-207ENST00000527133 ADRA2BP18089 450 aa18.03■□□□□ 0.48
CLNS1A-207ENST00000527133 RFC4P35249 363 aa18.03■□□□□ 0.48
CLNS1A-207ENST00000527133 POLKQ9UBT6 870 aa18.03■□□□□ 0.48
CLNS1A-207ENST00000527133 PARP3Q9Y6F1 533 aa18.03■□□□□ 0.48
CLNS1A-207ENST00000527133 EIF4A2Q14240 407 aaKnown RBP18.02■□□□□ 0.48
CLNS1A-207ENST00000527133 RC3H1Q5TC82 1133 aaKnown RBP18.02■□□□□ 0.48
CLNS1A-207ENST00000527133 C9orf131Q5VYM1 1079 aa18.02■□□□□ 0.48
CLNS1A-207ENST00000527133 CNTNAP4Q9C0A0 1308 aa18.01■□□□□ 0.47
CLNS1A-207ENST00000527133 ERVV-2B6SEH9 535 aa18.01■□□□□ 0.47
CLNS1A-207ENST00000527133 C16orf71Q8IYS4 520 aaPredicted RBP18.01■□□□□ 0.47
CLNS1A-207ENST00000527133 RBM46Q8TBY0 533 aaKnown RBP18.01■□□□□ 0.47
CLNS1A-207ENST00000527133 BRCA1P38398 1863 aaKnown RBP18.01■□□□□ 0.47
CLNS1A-207ENST00000527133 COL5A3P25940 1745 aaPredicted RBP18.01■□□□□ 0.47
CLNS1A-207ENST00000527133 RPS6KA4O75676 772 aa18■□□□□ 0.47
CLNS1A-207ENST00000527133 KCNA3P22001 575 aa18■□□□□ 0.47
CLNS1A-207ENST00000527133 TNNT2P45379 298 aaPredicted RBP18■□□□□ 0.47
CLNS1A-207ENST00000527133 HTRA3P83110 453 aa18■□□□□ 0.47
CLNS1A-207ENST00000527133 WDR90Q96KV7 1748 aa18■□□□□ 0.47
CLNS1A-207ENST00000527133 ZNF831Q5JPB2 1677 aa17.99■□□□□ 0.47
CLNS1A-207ENST00000527133 DCAF5Q96JK2 942 aa17.99■□□□□ 0.47
CLNS1A-207ENST00000527133 PLEKHG2Q9H7P9 1386 aa17.99■□□□□ 0.47
CLNS1A-207ENST00000527133 HSP90AB1P08238 724 aaKnown RBP17.98■□□□□ 0.47
CLNS1A-207ENST00000527133 PIM2Q9P1W9 311 aa17.98■□□□□ 0.47
CLNS1A-207ENST00000527133 CABP4P57796 275 aa17.97■□□□□ 0.47
CLNS1A-207ENST00000527133 DALRD3Q5D0E6 543 aaKnown RBP17.97■□□□□ 0.47
CLNS1A-207ENST00000527133 KLRG1Q96E93 195 aa17.97■□□□□ 0.47
CLNS1A-207ENST00000527133 ARFGEF1Q9Y6D6 1849 aa17.97■□□□□ 0.47
CLNS1A-207ENST00000527133 KCPQ6ZWJ8 1503 aa17.97■□□□□ 0.47
CLNS1A-207ENST00000527133 KDM6AO15550 1401 aaPredicted RBP17.97■□□□□ 0.47
CLNS1A-207ENST00000527133 MYH14Q7Z406 1995 aaKnown RBP17.97■□□□□ 0.47
CLNS1A-207ENST00000527133 PTCD1O75127 700 aaKnown RBP17.96■□□□□ 0.47
CLNS1A-207ENST00000527133 FSTL1Q12841 308 aa17.96■□□□□ 0.47
CLNS1A-207ENST00000527133 ZNF530Q6P9A1 599 aaPredicted RBP17.96■□□□□ 0.47
CLNS1A-207ENST00000527133 RNF181Q9P0P0 153 aa17.96■□□□□ 0.47
CLNS1A-207ENST00000527133 SRP68Q9UHB9 627 aaKnown RBP17.96■□□□□ 0.47
CLNS1A-207ENST00000527133 KDM2BQ8NHM5 1336 aa17.96■□□□□ 0.46
CLNS1A-207ENST00000527133 FKBP8Q14318 412 aa17.95■□□□□ 0.46
CLNS1A-207ENST00000527133 PLEKHO1Q53GL0 409 aaPredicted RBP17.95■□□□□ 0.46
CLNS1A-207ENST00000527133 CRKLP46109 303 aaKnown RBP17.94■□□□□ 0.46
CLNS1A-207ENST00000527133 DDR1Q08345 913 aa17.94■□□□□ 0.46
CLNS1A-207ENST00000527133 COL13A1Q5TAT6 717 aaPredicted RBP17.94■□□□□ 0.46
CLNS1A-207ENST00000527133 POLR3GLQ9BT43 218 aa17.94■□□□□ 0.46
CLNS1A-207ENST00000527133 RRAGCQ9HB90 399 aa17.94■□□□□ 0.46
CLNS1A-207ENST00000527133 USP42Q9H9J4 1324 aaKnown RBP17.94■□□□□ 0.46
CLNS1A-207ENST00000527133 CHRNA5P30532 468 aa17.93■□□□□ 0.46
CLNS1A-207ENST00000527133 JMYQ8N9B5 988 aa17.93■□□□□ 0.46
CLNS1A-207ENST00000527133 MTHFSP49914 203 aa17.92■□□□□ 0.46
CLNS1A-207ENST00000527133 AMOTQ4VCS5 1084 aa17.92■□□□□ 0.46
CLNS1A-207ENST00000527133 C1orf141Q5JVX7 400 aa17.91■□□□□ 0.46
CLNS1A-207ENST00000527133 CAPN15O75808 1086 aa17.9■□□□□ 0.46
CLNS1A-207ENST00000527133 NFATC2IPQ8NCF5 419 aa17.9■□□□□ 0.46
CLNS1A-207ENST00000527133 POLRMTO00411 1230 aaKnown RBP17.89■□□□□ 0.45
CLNS1A-207ENST00000527133 AEBP1Q8IUX7 1158 aa17.89■□□□□ 0.45
CLNS1A-207ENST00000527133 TNRC6CQ9HCJ0 1690 aaKnown RBP17.89■□□□□ 0.45
CLNS1A-207ENST00000527133 RASSF7Q02833 373 aa17.88■□□□□ 0.45
CLNS1A-207ENST00000527133 INTS5Q6P9B9 1019 aaKnown RBP17.88■□□□□ 0.45
CLNS1A-207ENST00000527133 SMC1BQ8NDV3 1235 aa17.88■□□□□ 0.45
CLNS1A-207ENST00000527133 TJP1Q07157 1748 aa17.88■□□□□ 0.45
CLNS1A-207ENST00000527133 SBF1O95248 1867 aa17.87■□□□□ 0.45
CLNS1A-207ENST00000527133 TM4SF1P30408 202 aa17.87■□□□□ 0.45
CLNS1A-207ENST00000527133 ZPR1O75312 459 aa17.86■□□□□ 0.45
CLNS1A-207ENST00000527133 USPL1Q5W0Q7 1092 aa17.86■□□□□ 0.45
CLNS1A-207ENST00000527133 TNS4Q8IZW8 715 aa17.86■□□□□ 0.45
CLNS1A-207ENST00000527133 ADAMTS7Q9UKP4 1686 aa17.85■□□□□ 0.45
CLNS1A-207ENST00000527133 SULT6B1Q6IMI4 303 aa17.84■□□□□ 0.45
CLNS1A-207ENST00000527133 DNAJC10Q8IXB1 793 aa17.84■□□□□ 0.45
CLNS1A-207ENST00000527133 SOS1Q07889 1333 aaPredicted RBP17.83■□□□□ 0.44
CLNS1A-207ENST00000527133 ZC3H4Q9UPT8 1303 aaKnown RBP17.83■□□□□ 0.44
CLNS1A-207ENST00000527133 LMNB1P20700 586 aa17.82■□□□□ 0.44
CLNS1A-207ENST00000527133 NFIXQ14938 502 aa17.82■□□□□ 0.44
CLNS1A-207ENST00000527133 PANK3Q9H999 370 aa17.82■□□□□ 0.44
CLNS1A-207ENST00000527133 GLTPD2A6NH11 291 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms