RNA–Protein interactions for RNA: ENST00000527025.5

CCDC90B-208, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 777 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-208ENST00000527025 PHKG2P15735 406 aa12.01□□□□□ -0.49
CCDC90B-208ENST00000527025 LY75O60449 1722 aa12□□□□□ -0.49
CCDC90B-208ENST00000527025 DIAPH1O60610 1272 aaKnown RBP12□□□□□ -0.49
CCDC90B-208ENST00000527025 CD44P16070 742 aaKnown RBP12□□□□□ -0.49
CCDC90B-208ENST00000527025 SPG7Q9UQ90 795 aa12□□□□□ -0.49
CCDC90B-208ENST00000527025 PAPPAQ13219 1627 aa12□□□□□ -0.49
CCDC90B-208ENST00000527025 POTEIP0CG38 1075 aa11.99□□□□□ -0.49
CCDC90B-208ENST00000527025 MPRIPQ6WCQ1 1025 aa11.99□□□□□ -0.49
CCDC90B-208ENST00000527025 PIGBQ92521 554 aa11.99□□□□□ -0.49
CCDC90B-208ENST00000527025 KDM6AO15550 1401 aaPredicted RBP11.98□□□□□ -0.49
CCDC90B-208ENST00000527025 ZNF316A6NFI3 1004 aaPredicted RBP11.98□□□□□ -0.49
CCDC90B-208ENST00000527025 IFNL2Q8IZJ0 200 aa11.98□□□□□ -0.49
CCDC90B-208ENST00000527025 ZNF827Q17R98 1081 aa11.97□□□□□ -0.49
CCDC90B-208ENST00000527025 PLEKHO1Q53GL0 409 aaPredicted RBP11.97□□□□□ -0.49
CCDC90B-208ENST00000527025 MTHFSDQ2M296 383 aaKnown RBP11.96□□□□□ -0.49
CCDC90B-208ENST00000527025 ZNF530Q6P9A1 599 aaPredicted RBP11.96□□□□□ -0.49
CCDC90B-208ENST00000527025 CASZ1Q86V15 1759 aa11.96□□□□□ -0.49
CCDC90B-208ENST00000527025 PLEKHG2Q9H7P9 1386 aa11.95□□□□□ -0.5
CCDC90B-208ENST00000527025 U2SURPO15042 1029 aaKnown RBP11.95□□□□□ -0.5
CCDC90B-208ENST00000527025 SLC15A2Q16348 729 aa11.95□□□□□ -0.5
CCDC90B-208ENST00000527025 AMOTQ4VCS5 1084 aa11.95□□□□□ -0.5
CCDC90B-208ENST00000527025 NBPF14Q5TI25 921 aa11.95□□□□□ -0.5
CCDC90B-208ENST00000527025 LHX8Q68G74 356 aa11.95□□□□□ -0.5
CCDC90B-208ENST00000527025 PHACTR3Q96KR7 559 aa11.95□□□□□ -0.5
CCDC90B-208ENST00000527025 LGR6Q9HBX8 967 aa11.95□□□□□ -0.5
CCDC90B-208ENST00000527025 ASAP1Q9ULH1 1129 aa11.95□□□□□ -0.5
CCDC90B-208ENST00000527025 VIRMAQ69YN4 1812 aaKnown RBP11.95□□□□□ -0.5
CCDC90B-208ENST00000527025 ATG3Q9NT62 314 aa11.94□□□□□ -0.5
CCDC90B-208ENST00000527025 TAF1LQ8IZX4 1826 aa11.94□□□□□ -0.5
CCDC90B-208ENST00000527025 TUBGCP6Q96RT7 1819 aa11.94□□□□□ -0.5
CCDC90B-208ENST00000527025 SCN11AQ9UI33 1791 aa11.94□□□□□ -0.5
CCDC90B-208ENST00000527025 AMIGO3Q86WK7 504 aa11.93□□□□□ -0.5
CCDC90B-208ENST00000527025 DCAF5Q96JK2 942 aa11.93□□□□□ -0.5
CCDC90B-208ENST00000527025 SLC4A9Q96Q91 983 aa11.93□□□□□ -0.5
CCDC90B-208ENST00000527025 RSPH6AQ9H0K4 717 aa11.93□□□□□ -0.5
CCDC90B-208ENST00000527025 PALLDQ8WX93 1383 aa11.92□□□□□ -0.5
CCDC90B-208ENST00000527025 ADAMTS7Q9UKP4 1686 aa11.92□□□□□ -0.5
CCDC90B-208ENST00000527025 ERVV-2B6SEH9 535 aa11.92□□□□□ -0.5
CCDC90B-208ENST00000527025 SLC27A3Q5K4L6 730 aa11.92□□□□□ -0.5
CCDC90B-208ENST00000527025 NFATC2IPQ8NCF5 419 aa11.92□□□□□ -0.5
CCDC90B-208ENST00000527025 TMOD3Q9NYL9 352 aa11.92□□□□□ -0.5
CCDC90B-208ENST00000527025 CCNL1Q9UK58 526 aaPredicted RBP11.92□□□□□ -0.5
CCDC90B-208ENST00000527025 LRP5O75197 1615 aa11.92□□□□□ -0.5
CCDC90B-208ENST00000527025 C5P01031 1676 aa11.91□□□□□ -0.5
CCDC90B-208ENST00000527025 ITPK1Q13572 414 aa11.91□□□□□ -0.5
CCDC90B-208ENST00000527025 AKAP4Q5JQC9 854 aa11.91□□□□□ -0.5
CCDC90B-208ENST00000527025 SMIM5Q71RC9 77 aa11.91□□□□□ -0.5
CCDC90B-208ENST00000527025 CREBZFQ9NS37 354 aa11.91□□□□□ -0.5
CCDC90B-208ENST00000527025 STK32BQ9NY57 414 aa11.91□□□□□ -0.5
CCDC90B-208ENST00000527025 U2AF1L5P0DN76 240 aaPredicted RBP11.9□□□□□ -0.5
CCDC90B-208ENST00000527025 PRKAR2BP31323 418 aa11.9□□□□□ -0.5
CCDC90B-208ENST00000527025 U2AF1Q01081 240 aaKnown RBP eCLIP11.9□□□□□ -0.5
CCDC90B-208ENST00000527025 IL17REQ8NFR9 667 aa11.9□□□□□ -0.5
CCDC90B-208ENST00000527025 CFAP53Q96M91 514 aa11.9□□□□□ -0.5
CCDC90B-208ENST00000527025 PNPLA7Q6ZV29 1317 aa11.89□□□□□ -0.51
CCDC90B-208ENST00000527025 LOC102724428A0A0B4J2F2 783 aa11.89□□□□□ -0.51
CCDC90B-208ENST00000527025 RNMTO43148 476 aaKnown RBP11.89□□□□□ -0.51
CCDC90B-208ENST00000527025 ZBTB7AO95365 584 aa11.89□□□□□ -0.51
CCDC90B-208ENST00000527025 HSP90AB1P08238 724 aaKnown RBP11.89□□□□□ -0.51
CCDC90B-208ENST00000527025 SIK1P57059 783 aa11.89□□□□□ -0.51
CCDC90B-208ENST00000527025 CABP4P57796 275 aa11.89□□□□□ -0.51
CCDC90B-208ENST00000527025 RALBP1Q15311 655 aa11.89□□□□□ -0.51
CCDC90B-208ENST00000527025 C1orf141Q5JVX7 400 aa11.89□□□□□ -0.51
CCDC90B-208ENST00000527025 LINC00116Q8NCU8 138 aa11.89□□□□□ -0.51
CCDC90B-208ENST00000527025 QSER1Q2KHR3 1735 aa11.89□□□□□ -0.51
CCDC90B-208ENST00000527025 PTGER2P43116 358 aa11.88□□□□□ -0.51
CCDC90B-208ENST00000527025 SMARCC1Q92922 1105 aaPredicted RBP11.88□□□□□ -0.51
CCDC90B-208ENST00000527025 C4BP0C0L5 1744 aa11.88□□□□□ -0.51
CCDC90B-208ENST00000527025 FCHSD2O94868 740 aa11.87□□□□□ -0.51
CCDC90B-208ENST00000527025 COL23A1Q86Y22 540 aaPredicted RBP11.87□□□□□ -0.51
CCDC90B-208ENST00000527025 PLEKHF1Q96S99 279 aa11.87□□□□□ -0.51
CCDC90B-208ENST00000527025 SGIP1Q9BQI5 828 aa11.87□□□□□ -0.51
CCDC90B-208ENST00000527025 PRKRIP1Q9H875 184 aaPredicted RBP11.87□□□□□ -0.51
CCDC90B-208ENST00000527025 SLC52A2Q9HAB3 445 aa11.87□□□□□ -0.51
CCDC90B-208ENST00000527025 MRC1P22897 1456 aa11.87□□□□□ -0.51
CCDC90B-208ENST00000527025 SIPA1L3O60292 1781 aaPredicted RBP11.87□□□□□ -0.51
CCDC90B-208ENST00000527025 SLC39A6Q13433 755 aa11.86□□□□□ -0.51
CCDC90B-208ENST00000527025 CCDC184Q52MB2 194 aa11.86□□□□□ -0.51
CCDC90B-208ENST00000527025 TFCP2L1Q9NZI6 479 aa11.86□□□□□ -0.51
CCDC90B-208ENST00000527025 NUDCQ9Y266 331 aa11.86□□□□□ -0.51
CCDC90B-208ENST00000527025 UBR3Q6ZT12 1888 aa11.86□□□□□ -0.51
CCDC90B-208ENST00000527025 MYH14Q7Z406 1995 aaKnown RBP11.86□□□□□ -0.51
CCDC90B-208ENST00000527025 DLG5Q8TDM6 1919 aa11.86□□□□□ -0.51
CCDC90B-208ENST00000527025 COL24A1Q17RW2 1714 aa11.86□□□□□ -0.51
CCDC90B-208ENST00000527025 MYBBP1AQ9BQG0 1328 aaKnown RBP11.86□□□□□ -0.51
CCDC90B-208ENST00000527025 ZNF831Q5JPB2 1677 aa11.85□□□□□ -0.51
CCDC90B-208ENST00000527025 GNAT3A8MTJ3 354 aa11.85□□□□□ -0.51
CCDC90B-208ENST00000527025 PTCD1O75127 700 aaKnown RBP11.85□□□□□ -0.51
CCDC90B-208ENST00000527025 ATP6V1AP38606 617 aa11.85□□□□□ -0.51
CCDC90B-208ENST00000527025 COL5A3P25940 1745 aaPredicted RBP11.85□□□□□ -0.51
CCDC90B-208ENST00000527025 TJP1Q07157 1748 aa11.85□□□□□ -0.51
CCDC90B-208ENST00000527025 MAP3K5Q99683 1374 aa11.84□□□□□ -0.51
CCDC90B-208ENST00000527025 DCTN1Q14203 1278 aa11.84□□□□□ -0.51
CCDC90B-208ENST00000527025 SPON1Q9HCB6 807 aa11.84□□□□□ -0.51
CCDC90B-208ENST00000527025 KCPQ6ZWJ8 1503 aa11.84□□□□□ -0.51
CCDC90B-208ENST00000527025 CEMIPQ8WUJ3 1361 aa11.83□□□□□ -0.52
CCDC90B-208ENST00000527025 UBR2Q8IWV8 1755 aa11.83□□□□□ -0.52
CCDC90B-208ENST00000527025 KCNQ3O43525 872 aa11.83□□□□□ -0.52
CCDC90B-208ENST00000527025 MCM10Q7L590 875 aa11.83□□□□□ -0.52
CCDC90B-208ENST00000527025 GAS2L2Q8NHY3 880 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms