RNA–Protein interactions for RNA: ENST00000526527.1

COPB1-205, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-205ENST00000526527 EPS8L1Q8TE68 723 aa6.85□□□□□ -1.31
COPB1-205ENST00000526527 KRTAP9-9Q9BYP9 154 aa6.85□□□□□ -1.31
COPB1-205ENST00000526527 KRTAP9-4Q9BYQ2 154 aa6.85□□□□□ -1.31
COPB1-205ENST00000526527 GPBP1L1Q9HC44 474 aaPredicted RBP6.85□□□□□ -1.31
COPB1-205ENST00000526527 NOP53Q9NZM5 478 aaKnown RBP6.85□□□□□ -1.31
COPB1-205ENST00000526527 ERVK-9P63128 1117 aa6.84□□□□□ -1.31
COPB1-205ENST00000526527 SH3D19Q5HYK7 790 aa6.84□□□□□ -1.31
COPB1-205ENST00000526527 CC2D2BQ6DHV5 1058 aa6.84□□□□□ -1.31
COPB1-205ENST00000526527 SLCO4C1Q6ZQN7 724 aa6.84□□□□□ -1.31
COPB1-205ENST00000526527 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.84□□□□□ -1.31
COPB1-205ENST00000526527 FAM117AQ9C073 453 aa6.84□□□□□ -1.31
COPB1-205ENST00000526527 GGA1Q9UJY5 639 aa6.84□□□□□ -1.31
COPB1-205ENST00000526527 BMP4P12644 408 aa6.83□□□□□ -1.32
COPB1-205ENST00000526527 CCDC125Q86Z20 511 aa6.83□□□□□ -1.32
COPB1-205ENST00000526527 KDM4CQ9H3R0 1056 aa6.83□□□□□ -1.32
COPB1-205ENST00000526527 EPXP11678 715 aa6.82□□□□□ -1.32
COPB1-205ENST00000526527 GATA4P43694 442 aa6.82□□□□□ -1.32
COPB1-205ENST00000526527 LBRQ14739 615 aaKnown RBP6.82□□□□□ -1.32
COPB1-205ENST00000526527 FOXD4L6Q3SYB3 417 aaPredicted RBP6.82□□□□□ -1.32
COPB1-205ENST00000526527 FOXD4L3Q6VB84 417 aaPredicted RBP6.82□□□□□ -1.32
COPB1-205ENST00000526527 GPAMQ9HCL2 828 aa6.82□□□□□ -1.32
COPB1-205ENST00000526527 ATP1B4Q9UN42 357 aaPredicted RBP6.82□□□□□ -1.32
COPB1-205ENST00000526527 SCO2A0A1W2PP80 73 aa6.81□□□□□ -1.32
COPB1-205ENST00000526527 BTBD11A6QL63 1104 aa6.81□□□□□ -1.32
COPB1-205ENST00000526527 AP1G2O75843 785 aa6.81□□□□□ -1.32
COPB1-205ENST00000526527 DGKGP49619 791 aa6.81□□□□□ -1.32
COPB1-205ENST00000526527 CTBSQ01459 385 aa6.81□□□□□ -1.32
COPB1-205ENST00000526527 ATXN7L1Q9ULK2 861 aaPredicted RBP6.81□□□□□ -1.32
COPB1-205ENST00000526527 A0A1B0GTH6 734 aa6.8□□□□□ -1.32
COPB1-205ENST00000526527 RSPO4Q2I0M5 234 aaPredicted RBP6.8□□□□□ -1.32
COPB1-205ENST00000526527 ARTNQ5T4W7 220 aa6.8□□□□□ -1.32
COPB1-205ENST00000526527 CYP2U1Q7Z449 544 aa6.8□□□□□ -1.32
COPB1-205ENST00000526527 DDRGK1Q96HY6 314 aa6.8□□□□□ -1.32
COPB1-205ENST00000526527 HMX1Q9NP08 348 aaPredicted RBP6.8□□□□□ -1.32
COPB1-205ENST00000526527 FGFR3P22607 806 aa6.79□□□□□ -1.32
COPB1-205ENST00000526527 PHKA2P46019 1235 aa6.79□□□□□ -1.32
COPB1-205ENST00000526527 ZFP64Q9NPA5 681 aa6.79□□□□□ -1.32
COPB1-205ENST00000526527 NDFIP2Q9NV92 336 aa6.79□□□□□ -1.32
COPB1-205ENST00000526527 CSB-PGBD3P0DP91 1061 aa6.78□□□□□ -1.32
COPB1-205ENST00000526527 ARAFP10398 606 aa6.78□□□□□ -1.32
COPB1-205ENST00000526527 CENPCQ03188 943 aa6.78□□□□□ -1.32
COPB1-205ENST00000526527 NKAPLQ5M9Q1 402 aa6.78□□□□□ -1.32
COPB1-205ENST00000526527 RNF135Q8IUD6 432 aa6.78□□□□□ -1.32
COPB1-205ENST00000526527 PGBD3Q8N328 593 aa6.78□□□□□ -1.32
COPB1-205ENST00000526527 ABHD17AQ96GS6 310 aa6.78□□□□□ -1.32
COPB1-205ENST00000526527 ARHGEF10LQ9HCE6 1279 aa6.78□□□□□ -1.32
COPB1-205ENST00000526527 BNIP3LO60238 219 aa6.77□□□□□ -1.33
COPB1-205ENST00000526527 TRAK2O60296 914 aa6.77□□□□□ -1.33
COPB1-205ENST00000526527 USP17L8P0C7I0 530 aa6.77□□□□□ -1.33
COPB1-205ENST00000526527 SCTRP47872 440 aa6.77□□□□□ -1.33
COPB1-205ENST00000526527 RNF20Q5VTR2 975 aa6.77□□□□□ -1.33
COPB1-205ENST00000526527 OSBPL3Q9H4L5 887 aa6.77□□□□□ -1.33
COPB1-205ENST00000526527 RUBCNLQ9H714 662 aa6.77□□□□□ -1.33
COPB1-205ENST00000526527 KRTAP4-8A0A0G2JLE6 195 aa6.76□□□□□ -1.33
COPB1-205ENST00000526527 NEURL1BA8MQ27 555 aa6.76□□□□□ -1.33
COPB1-205ENST00000526527 MSX1P28360 303 aa6.76□□□□□ -1.33
COPB1-205ENST00000526527 EFHC2Q5JST6 749 aa6.76□□□□□ -1.33
COPB1-205ENST00000526527 CHSY3Q70JA7 882 aa6.76□□□□□ -1.33
COPB1-205ENST00000526527 KRTAP19-1Q8IUB9 90 aa6.76□□□□□ -1.33
COPB1-205ENST00000526527 CNKSR1Q969H4 720 aa6.76□□□□□ -1.33
COPB1-205ENST00000526527 ESYT1Q9BSJ8 1104 aa6.76□□□□□ -1.33
COPB1-205ENST00000526527 PCDHB9Q9Y5E1 797 aa6.76□□□□□ -1.33
COPB1-205ENST00000526527 GNRH1P01148 92 aa6.75□□□□□ -1.33
COPB1-205ENST00000526527 ZSCAN10Q96SZ4 725 aaPredicted RBP6.75□□□□□ -1.33
COPB1-205ENST00000526527 HRH3Q9Y5N1 445 aa6.75□□□□□ -1.33
COPB1-205ENST00000526527 IL2RAP01589 272 aa6.74□□□□□ -1.33
COPB1-205ENST00000526527 SPATA31C1P0DKV0 1188 aa6.74□□□□□ -1.33
COPB1-205ENST00000526527 RFC5P40937 340 aa6.74□□□□□ -1.33
COPB1-205ENST00000526527 NBPF11Q86T75 865 aa6.74□□□□□ -1.33
COPB1-205ENST00000526527 TRIM11Q96F44 468 aa6.74□□□□□ -1.33
COPB1-205ENST00000526527 PLVAPQ9BX97 442 aa6.74□□□□□ -1.33
COPB1-205ENST00000526527 ESF1Q9H501 851 aaKnown RBP6.74□□□□□ -1.33
COPB1-205ENST00000526527 RAB6BQ9NRW1 208 aa6.74□□□□□ -1.33
COPB1-205ENST00000526527 ZBBXA8MT70 800 aa6.73□□□□□ -1.33
COPB1-205ENST00000526527 TPSG1Q9NRR2 321 aa6.73□□□□□ -1.33
COPB1-205ENST00000526527 KLF15Q9UIH9 416 aa6.73□□□□□ -1.33
COPB1-205ENST00000526527 DYRK3O43781 588 aa6.72□□□□□ -1.33
COPB1-205ENST00000526527 C4orf17Q53FE4 359 aa6.72□□□□□ -1.33
COPB1-205ENST00000526527 GNASQ5JWF2 1037 aa6.72□□□□□ -1.33
COPB1-205ENST00000526527 XAGE2Q96GT9 111 aa6.72□□□□□ -1.33
COPB1-205ENST00000526527 TRIM34Q9BYJ4 488 aa6.72□□□□□ -1.33
COPB1-205ENST00000526527 GOLGA2P5Q9HBQ8 144 aa6.72□□□□□ -1.33
COPB1-205ENST00000526527 PCDHB11Q9Y5F2 797 aa6.72□□□□□ -1.33
COPB1-205ENST00000526527 TMEM214Q6NUQ4 689 aaKnown RBP6.71□□□□□ -1.34
COPB1-205ENST00000526527 FHDC1Q9C0D6 1143 aaPredicted RBP6.71□□□□□ -1.34
COPB1-205ENST00000526527 CRISPLD1Q9H336 500 aa6.71□□□□□ -1.34
COPB1-205ENST00000526527 ADH6P28332 368 aa6.7□□□□□ -1.34
COPB1-205ENST00000526527 GTF2E1P29083 439 aaPredicted RBP6.7□□□□□ -1.34
COPB1-205ENST00000526527 MCCD1P59942 119 aaPredicted RBP6.7□□□□□ -1.34
COPB1-205ENST00000526527 PRSS36Q5K4E3 855 aa6.7□□□□□ -1.34
COPB1-205ENST00000526527 FIGNL1Q6PIW4 674 aa6.7□□□□□ -1.34
COPB1-205ENST00000526527 ZCCHC2Q9C0B9 1178 aaKnown RBP6.7□□□□□ -1.34
COPB1-205ENST00000526527 PCDHGC4Q9Y5F7 938 aa6.7□□□□□ -1.34
COPB1-205ENST00000526527 FBXO45P0C2W1 286 aa6.69□□□□□ -1.34
COPB1-205ENST00000526527 FCHSD1Q86WN1 690 aa6.69□□□□□ -1.34
COPB1-205ENST00000526527 AVENQ9NQS1 362 aaPredicted RBP6.69□□□□□ -1.34
COPB1-205ENST00000526527 DNAAF2Q9NVR5 837 aaKnown RBP6.68□□□□□ -1.34
COPB1-205ENST00000526527 TMEM259Q4ZIN3 620 aa6.67□□□□□ -1.34
COPB1-205ENST00000526527 FAM182BQ5T319 152 aa6.67□□□□□ -1.34
COPB1-205ENST00000526527 GJD4Q96KN9 370 aaPredicted RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms