RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 RRAGCQ9HB90 399 aa15.23■□□□□ 0.03
NEDD8-204ENST00000526430 MAP3K19Q56UN5 1328 aa15.22■□□□□ 0.03
NEDD8-204ENST00000526430 ZC3H4Q9UPT8 1303 aaKnown RBP15.22■□□□□ 0.03
NEDD8-204ENST00000526430 MPRIPQ6WCQ1 1025 aa15.22■□□□□ 0.03
NEDD8-204ENST00000526430 SMIM5Q71RC9 77 aa15.22■□□□□ 0.03
NEDD8-204ENST00000526430 ZEB1P37275 1124 aaPredicted RBP15.21■□□□□ 0.03
NEDD8-204ENST00000526430 EIF4G2P78344 907 aaKnown RBP eCLIP15.21■□□□□ 0.03
NEDD8-204ENST00000526430 HDGFL2Q7Z4V5 671 aaPredicted RBP15.21■□□□□ 0.03
NEDD8-204ENST00000526430 RAPGEF4Q8WZA2 1011 aa15.21■□□□□ 0.03
NEDD8-204ENST00000526430 DICER1Q9UPY3 1922 aaKnown RBP15.2■□□□□ 0.02
NEDD8-204ENST00000526430 DPEP1P16444 411 aa15.2■□□□□ 0.02
NEDD8-204ENST00000526430 LINC00116Q8NCU8 138 aa15.2■□□□□ 0.02
NEDD8-204ENST00000526430 DCAF5Q96JK2 942 aa15.2■□□□□ 0.02
NEDD8-204ENST00000526430 DLEC1Q9Y238 1755 aa15.2■□□□□ 0.02
NEDD8-204ENST00000526430 A0A1W2PP64 1363 aa15.2■□□□□ 0.02
NEDD8-204ENST00000526430 VIRMAQ69YN4 1812 aaKnown RBP15.2■□□□□ 0.02
NEDD8-204ENST00000526430 KDM6AO15550 1401 aaPredicted RBP15.19■□□□□ 0.02
NEDD8-204ENST00000526430 LOC102724428A0A0B4J2F2 783 aa15.19■□□□□ 0.02
NEDD8-204ENST00000526430 GNPATO15228 680 aa15.19■□□□□ 0.02
NEDD8-204ENST00000526430 KCNA3P22001 575 aa15.19■□□□□ 0.02
NEDD8-204ENST00000526430 SIK1P57059 783 aa15.19■□□□□ 0.02
NEDD8-204ENST00000526430 NBPF6Q5VWK0 638 aa15.19■□□□□ 0.02
NEDD8-204ENST00000526430 NLGN1Q8N2Q7 840 aa15.19■□□□□ 0.02
NEDD8-204ENST00000526430 NBPF4Q96M43 638 aa15.19■□□□□ 0.02
NEDD8-204ENST00000526430 CCDC87Q9NVE4 849 aa15.19■□□□□ 0.02
NEDD8-204ENST00000526430 RNF181Q9P0P0 153 aa15.19■□□□□ 0.02
NEDD8-204ENST00000526430 MYH14Q7Z406 1995 aaKnown RBP15.18■□□□□ 0.02
NEDD8-204ENST00000526430 SMG6Q86US8 1419 aaKnown RBP15.18■□□□□ 0.02
NEDD8-204ENST00000526430 TATP17735 454 aaPredicted RBP15.18■□□□□ 0.02
NEDD8-204ENST00000526430 AMPHP49418 695 aa15.18■□□□□ 0.02
NEDD8-204ENST00000526430 PRDM10Q9NQV6 1147 aa15.18■□□□□ 0.02
NEDD8-204ENST00000526430 TERF2IPQ9NYB0 399 aa15.18■□□□□ 0.02
NEDD8-204ENST00000526430 CYP27B1O15528 508 aa15.17■□□□□ 0.02
NEDD8-204ENST00000526430 PIGBQ92521 554 aa15.17■□□□□ 0.02
NEDD8-204ENST00000526430 PIM2Q9P1W9 311 aa15.17■□□□□ 0.02
NEDD8-204ENST00000526430 TMF1P82094 1093 aa15.16■□□□□ 0.02
NEDD8-204ENST00000526430 PUS7Q96PZ0 661 aaKnown RBP15.16■□□□□ 0.02
NEDD8-204ENST00000526430 VEGFAP15692 232 aaPredicted RBP15.15■□□□□ 0.02
NEDD8-204ENST00000526430 SLC12A5Q9H2X9 1139 aa15.15■□□□□ 0.02
NEDD8-204ENST00000526430 ADRA2BP18089 450 aa15.14■□□□□ 0.01
NEDD8-204ENST00000526430 ITPK1Q13572 414 aa15.14■□□□□ 0.01
NEDD8-204ENST00000526430 NKX1-1Q15270 411 aaPredicted RBP15.14■□□□□ 0.01
NEDD8-204ENST00000526430 DALRD3Q5D0E6 543 aaKnown RBP15.14■□□□□ 0.01
NEDD8-204ENST00000526430 USHBP1Q8N6Y0 703 aa15.14■□□□□ 0.01
NEDD8-204ENST00000526430 TMC1Q8TDI8 760 aa15.14■□□□□ 0.01
NEDD8-204ENST00000526430 COG3Q96JB2 828 aa15.14■□□□□ 0.01
NEDD8-204ENST00000526430 AFDNP55196 1824 aaKnown RBP15.13■□□□□ 0.01
NEDD8-204ENST00000526430 KDRP35968 1356 aa15.12■□□□□ 0.01
NEDD8-204ENST00000526430 NCAPD2Q15021 1401 aa15.12■□□□□ 0.01
NEDD8-204ENST00000526430 GLTPD2A6NH11 291 aa15.12■□□□□ 0.01
NEDD8-204ENST00000526430 FOXN1O15353 648 aa15.12■□□□□ 0.01
NEDD8-204ENST00000526430 FAM161AQ3B820 660 aa15.12■□□□□ 0.01
NEDD8-204ENST00000526430 TRAPPC3LQ5T215 181 aa15.12■□□□□ 0.01
NEDD8-204ENST00000526430 CREBZFQ9NS37 354 aa15.12■□□□□ 0.01
NEDD8-204ENST00000526430 RTCBQ9Y3I0 505 aaKnown RBP15.12■□□□□ 0.01
NEDD8-204ENST00000526430 PARP3Q9Y6F1 533 aa15.12■□□□□ 0.01
NEDD8-204ENST00000526430 KIF20BQ96Q89 1820 aa15.12■□□□□ 0.01
NEDD8-204ENST00000526430 GYS1P13807 737 aa15.11■□□□□ 0.01
NEDD8-204ENST00000526430 ATP6V1AP38606 617 aa15.11■□□□□ 0.01
NEDD8-204ENST00000526430 INSRP06213 1382 aa15.11■□□□□ 0.01
NEDD8-204ENST00000526430 ANKRD26Q9UPS8 1709 aa15.1■□□□□ 0.01
NEDD8-204ENST00000526430 SLC24A1O60721 1099 aa15.1■□□□□ 0.01
NEDD8-204ENST00000526430 KIF24Q5T7B8 1368 aa15.1■□□□□ 0.01
NEDD8-204ENST00000526430 FBLN1P23142 703 aa15.09■□□□□ 0.01
NEDD8-204ENST00000526430 CTCFP49711 727 aaPredicted RBP15.09■□□□□ 0.01
NEDD8-204ENST00000526430 RC3H1Q5TC82 1133 aaKnown RBP15.09■□□□□ 0.01
NEDD8-204ENST00000526430 TMOD3Q9NYL9 352 aa15.09■□□□□ 0.01
NEDD8-204ENST00000526430 ASAP1Q9ULH1 1129 aa15.09■□□□□ 0.01
NEDD8-204ENST00000526430 PDE4DIPQ5VU43 2346 aa15.09■□□□□ 0.01
NEDD8-204ENST00000526430 NRXN2Q9P2S2 1712 aa15.09■□□□□ 0.01
NEDD8-204ENST00000526430 FER1L6Q2WGJ9 1857 aa15.08■□□□□ 0.01
NEDD8-204ENST00000526430 LMNB1P20700 586 aa15.08■□□□□ 0
NEDD8-204ENST00000526430 ARHGEF1Q92888 912 aaKnown RBP15.08■□□□□ 0
NEDD8-204ENST00000526430 ADAMTS7Q9UKP4 1686 aa15.08■□□□□ 0
NEDD8-204ENST00000526430 CNTNAP1P78357 1384 aa15.08■□□□□ 0
NEDD8-204ENST00000526430 KIF7Q2M1P5 1343 aa15.07■□□□□ 0
NEDD8-204ENST00000526430 WASHC2AQ641Q2 1341 aa15.07■□□□□ 0
NEDD8-204ENST00000526430 CNTNAP4Q9C0A0 1308 aa15.07■□□□□ 0
NEDD8-204ENST00000526430 FLT4P35916 1363 aa15.07■□□□□ 0
NEDD8-204ENST00000526430 SCN4AP35499 1836 aa15.06■□□□□ 0
NEDD8-204ENST00000526430 RFC4P35249 363 aa15.06■□□□□ 0
NEDD8-204ENST00000526430 RRS1Q15050 365 aaKnown RBP15.06■□□□□ 0
NEDD8-204ENST00000526430 ABHD8Q96I13 439 aa15.06■□□□□ 0
NEDD8-204ENST00000526430 MKRN1Q9UHC7 482 aaKnown RBP15.06■□□□□ 0
NEDD8-204ENST00000526430 POTECB2RU33 542 aa15.05■□□□□ -0
NEDD8-204ENST00000526430 RPS6KA4O75676 772 aa15.05■□□□□ -0
NEDD8-204ENST00000526430 RASSF7Q02833 373 aa15.05■□□□□ -0
NEDD8-204ENST00000526430 AIDAQ96BJ3 306 aa15.05■□□□□ -0
NEDD8-204ENST00000526430 ATG3Q9NT62 314 aa15.05■□□□□ -0
NEDD8-204ENST00000526430 RGS19P49795 217 aa15.04■□□□□ -0
NEDD8-204ENST00000526430 MLLT1Q03111 559 aaPredicted RBP15.04■□□□□ -0
NEDD8-204ENST00000526430 CARD14Q9BXL6 1004 aa15.04■□□□□ -0
NEDD8-204ENST00000526430 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.04■□□□□ -06e-8■■□□□ 11.8
NEDD8-204ENST00000526430 SPG7Q9UQ90 795 aa15.04■□□□□ -0
NEDD8-204ENST00000526430 TNRC18O15417 2968 aaPredicted RBP15.03■□□□□ -0
NEDD8-204ENST00000526430 CHRNA5P30532 468 aa15.03■□□□□ -0
NEDD8-204ENST00000526430 HSP90AB2PQ58FF8 381 aa15.03■□□□□ -0
NEDD8-204ENST00000526430 TJP1Q07157 1748 aa15.03■□□□□ -0
NEDD8-204ENST00000526430 DDR1Q08345 913 aa15.02■□□□□ -0
NEDD8-204ENST00000526430 CDCA8Q53HL2 280 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms