RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 WDR44Q5JSH3 913 aa8.87□□□□□ -0.99
SVIP-202ENST00000525670 ESYT1Q9BSJ8 1104 aa8.87□□□□□ -0.99
SVIP-202ENST00000525670 DYRK1BQ9Y463 629 aa8.87□□□□□ -0.99
SVIP-202ENST00000525670 WDR97A6NE52 1622 aa8.87□□□□□ -0.99
SVIP-202ENST00000525670 BIVM-ERCC5R4GMW8 1640 aa8.87□□□□□ -0.99
SVIP-202ENST00000525670 AQRO60306 1485 aaKnown RBP eCLIP8.86□□□□□ -0.99
SVIP-202ENST00000525670 ABL2P42684 1182 aa8.86□□□□□ -0.99
SVIP-202ENST00000525670 VAC14Q08AM6 782 aa8.86□□□□□ -0.99
SVIP-202ENST00000525670 USP4Q13107 963 aa8.86□□□□□ -0.99
SVIP-202ENST00000525670 TSGA10IPQ3SY00 556 aa8.86□□□□□ -0.99
SVIP-202ENST00000525670 NBPF10Q6P3W6 841 aaKnown RBP8.86□□□□□ -0.99
SVIP-202ENST00000525670 TRIM22Q8IYM9 498 aa8.86□□□□□ -0.99
SVIP-202ENST00000525670 NBPF15Q8N660 670 aa8.86□□□□□ -0.99
SVIP-202ENST00000525670 CNKSR1Q969H4 720 aa8.86□□□□□ -0.99
SVIP-202ENST00000525670 TOP2BQ02880 1626 aa8.85□□□□□ -0.99
SVIP-202ENST00000525670 XAGE2Q96GT9 111 aa8.85□□□□□ -0.99
SVIP-202ENST00000525670 RAB6BQ9NRW1 208 aa8.85□□□□□ -0.99
SVIP-202ENST00000525670 DOLKQ9UPQ8 538 aa8.85□□□□□ -0.99
SVIP-202ENST00000525670 SOGA1O94964 1423 aa8.85□□□□□ -0.99
SVIP-202ENST00000525670 TDRD9Q8NDG6 1382 aaKnown RBP8.85□□□□□ -0.99
SVIP-202ENST00000525670 H7C1W4 665 aa8.84□□□□□ -0.99
SVIP-202ENST00000525670 IL2RAP01589 272 aa8.84□□□□□ -0.99
SVIP-202ENST00000525670 CENPCQ03188 943 aa8.84□□□□□ -0.99
SVIP-202ENST00000525670 MCM6Q14566 821 aa8.84□□□□□ -0.99
SVIP-202ENST00000525670 RIPOR1Q6ZS17 1223 aa8.84□□□□□ -0.99
SVIP-202ENST00000525670 TAS1R3Q7RTX0 852 aa8.84□□□□□ -0.99
SVIP-202ENST00000525670 RNF135Q8IUD6 432 aa8.84□□□□□ -0.99
SVIP-202ENST00000525670 CHIC2Q9UKJ5 165 aa8.84□□□□□ -0.99
SVIP-202ENST00000525670 PBRM1Q86U86 1689 aa8.84□□□□□ -0.99
SVIP-202ENST00000525670 DBN1Q16643 649 aa8.83□□□□□ -1
SVIP-202ENST00000525670 FOXR1Q6PIV2 292 aa8.83□□□□□ -1
SVIP-202ENST00000525670 SIRT1Q96EB6 747 aa8.83□□□□□ -1
SVIP-202ENST00000525670 ZNF837Q96EG3 531 aaPredicted RBP8.83□□□□□ -1
SVIP-202ENST00000525670 GAS2L1Q99501 681 aaPredicted RBP8.83□□□□□ -1
SVIP-202ENST00000525670 TIMMDC1Q9NPL8 285 aa8.83□□□□□ -1
SVIP-202ENST00000525670 HRH3Q9Y5N1 445 aa8.83□□□□□ -1
SVIP-202ENST00000525670 CHD1O14646 1710 aa8.83□□□□□ -1
SVIP-202ENST00000525670 WASLO00401 505 aaPredicted RBP8.82□□□□□ -1
SVIP-202ENST00000525670 SRSF11Q05519 484 aaKnown RBP8.82□□□□□ -1
SVIP-202ENST00000525670 ESCO1Q5FWF5 840 aa8.82□□□□□ -1
SVIP-202ENST00000525670 ZNF385CQ66K41 422 aaPredicted RBP8.82□□□□□ -1
SVIP-202ENST00000525670 SOX11P35716 441 aa8.81□□□□□ -1
SVIP-202ENST00000525670 SEMA3FQ13275 785 aa8.81□□□□□ -1
SVIP-202ENST00000525670 GAS6Q14393 721 aa8.81□□□□□ -1
SVIP-202ENST00000525670 SVOPQ8N4V2 548 aa8.81□□□□□ -1
SVIP-202ENST00000525670 ZSCAN10Q96SZ4 725 aaPredicted RBP8.81□□□□□ -1
SVIP-202ENST00000525670 ADAMTS8Q9UP79 889 aa8.81□□□□□ -1
SVIP-202ENST00000525670 SNAPC4Q5SXM2 1469 aa8.81□□□□□ -1
SVIP-202ENST00000525670 ADAMTS2O95450 1211 aa8.8□□□□□ -1
SVIP-202ENST00000525670 F11P03951 625 aa8.8□□□□□ -1
SVIP-202ENST00000525670 KCNMA1Q12791 1236 aa8.8□□□□□ -1
SVIP-202ENST00000525670 MAP7D1Q3KQU3 841 aa8.8□□□□□ -1
SVIP-202ENST00000525670 WHAMMQ8TF30 809 aa8.8□□□□□ -1
SVIP-202ENST00000525670 GTF2E1P29083 439 aaPredicted RBP8.79□□□□□ -1
SVIP-202ENST00000525670 OXLD1Q5BKU9 147 aa8.79□□□□□ -1
SVIP-202ENST00000525670 GTPBP3Q969Y2 492 aaKnown RBP8.79□□□□□ -1
SVIP-202ENST00000525670 FHDC1Q9C0D6 1143 aaPredicted RBP8.79□□□□□ -1
SVIP-202ENST00000525670 COG6Q9Y2V7 657 aa8.79□□□□□ -1
SVIP-202ENST00000525670 ABCA5Q8WWZ7 1642 aa8.79□□□□□ -1
SVIP-202ENST00000525670 ARHGEF15O94989 841 aa8.78□□□□□ -1
SVIP-202ENST00000525670 GNASQ5JWF2 1037 aa8.78□□□□□ -1
SVIP-202ENST00000525670 TMEM214Q6NUQ4 689 aaKnown RBP8.78□□□□□ -1
SVIP-202ENST00000525670 ETNK1Q9HBU6 452 aa8.78□□□□□ -1
SVIP-202ENST00000525670 MBIPQ9NS73 344 aa8.78□□□□□ -1
SVIP-202ENST00000525670 ABCA10Q8WWZ4 1543 aa8.77□□□□□ -1.01
SVIP-202ENST00000525670 GPR25O00155 361 aa8.77□□□□□ -1.01
SVIP-202ENST00000525670 PLPP7Q8NBV4 271 aa8.77□□□□□ -1.01
SVIP-202ENST00000525670 TRERF1Q96PN7 1200 aa8.77□□□□□ -1.01
SVIP-202ENST00000525670 GAPVD1Q14C86 1478 aa8.77□□□□□ -1.01
SVIP-202ENST00000525670 A0A1B0GTH6 734 aa8.76□□□□□ -1.01
SVIP-202ENST00000525670 PHKA2P46019 1235 aa8.76□□□□□ -1.01
SVIP-202ENST00000525670 LYPD4Q6UWN0 246 aa8.76□□□□□ -1.01
SVIP-202ENST00000525670 NUCKS1Q9H1E3 243 aaKnown RBP8.76□□□□□ -1.01
SVIP-202ENST00000525670 C4orf17Q53FE4 359 aa8.75□□□□□ -1.01
SVIP-202ENST00000525670 PPARGC1BQ86YN6 1023 aaKnown RBP8.75□□□□□ -1.01
SVIP-202ENST00000525670 WWC1Q8IX03 1113 aa8.75□□□□□ -1.01
SVIP-202ENST00000525670 STAU1O95793 577 aaKnown RBP8.74□□□□□ -1.01
SVIP-202ENST00000525670 INHAP05111 366 aa8.74□□□□□ -1.01
SVIP-202ENST00000525670 CELA2BP08218 269 aaPredicted RBP8.74□□□□□ -1.01
SVIP-202ENST00000525670 GSK3AP49840 483 aa8.74□□□□□ -1.01
SVIP-202ENST00000525670 GRIN2BQ13224 1484 aa8.74□□□□□ -1.01
SVIP-202ENST00000525670 IGF1RP08069 1367 aa8.73□□□□□ -1.01
SVIP-202ENST00000525670 ADAMTS12P58397 1594 aa8.73□□□□□ -1.01
SVIP-202ENST00000525670 RNF225M0QZC1 329 aaPredicted RBP8.73□□□□□ -1.01
SVIP-202ENST00000525670 SCNN1DP51172 638 aa8.73□□□□□ -1.01
SVIP-202ENST00000525670 GDF10P55107 478 aa8.73□□□□□ -1.01
SVIP-202ENST00000525670 MAP3K10Q02779 954 aa8.73□□□□□ -1.01
SVIP-202ENST00000525670 TLR1Q15399 786 aa8.73□□□□□ -1.01
SVIP-202ENST00000525670 RHBDD1Q8TEB9 315 aa8.73□□□□□ -1.01
SVIP-202ENST00000525670 CFHR5Q9BXR6 569 aa8.73□□□□□ -1.01
SVIP-202ENST00000525670 GPAMQ9HCL2 828 aa8.73□□□□□ -1.01
SVIP-202ENST00000525670 MARSP56192 900 aaKnown RBP8.72□□□□□ -1.01
SVIP-202ENST00000525670 FLIIQ13045 1269 aa8.72□□□□□ -1.01
SVIP-202ENST00000525670 LBRQ14739 615 aaKnown RBP8.72□□□□□ -1.01
SVIP-202ENST00000525670 ALG2Q9H553 416 aa8.72□□□□□ -1.01
SVIP-202ENST00000525670 ENAMQ9NRM1 1142 aa8.72□□□□□ -1.01
SVIP-202ENST00000525670 RAD21O60216 631 aa8.71□□□□□ -1.02
SVIP-202ENST00000525670 THBS1P07996 1170 aa8.71□□□□□ -1.02
SVIP-202ENST00000525670 CSB-PGBD3P0DP91 1061 aa8.71□□□□□ -1.02
SVIP-202ENST00000525670 MX2P20592 715 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms