RNA–Protein interactions for RNA: ENST00000525207.1

SF3B2-204, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-204ENST00000525207 C4AP0C0L4 1744 aa12.85□□□□□ -0.35
SF3B2-204ENST00000525207 TJP1Q07157 1748 aa12.85□□□□□ -0.35
SF3B2-204ENST00000525207 LOC102724428A0A0B4J2F2 783 aa12.85□□□□□ -0.35
SF3B2-204ENST00000525207 HSP90AB1P08238 724 aaKnown RBP12.85□□□□□ -0.35
SF3B2-204ENST00000525207 POLD1P28340 1107 aa12.85□□□□□ -0.35
SF3B2-204ENST00000525207 SIK1P57059 783 aa12.85□□□□□ -0.35
SF3B2-204ENST00000525207 AMOTQ4VCS5 1084 aa12.85□□□□□ -0.35
SF3B2-204ENST00000525207 PLEKHO1Q53GL0 409 aaPredicted RBP12.85□□□□□ -0.35
SF3B2-204ENST00000525207 ZNF530Q6P9A1 599 aaPredicted RBP12.85□□□□□ -0.35
SF3B2-204ENST00000525207 DCAF5Q96JK2 942 aa12.85□□□□□ -0.35
SF3B2-204ENST00000525207 CC2D1BQ5T0F9 858 aaKnown RBP12.84□□□□□ -0.35
SF3B2-204ENST00000525207 SULT6B1Q6IMI4 303 aa12.84□□□□□ -0.35
SF3B2-204ENST00000525207 AK7Q96M32 723 aa12.84□□□□□ -0.35
SF3B2-204ENST00000525207 ASAP1Q9ULH1 1129 aa12.84□□□□□ -0.35
SF3B2-204ENST00000525207 DCAF8L1A6NGE4 600 aa12.83□□□□□ -0.36
SF3B2-204ENST00000525207 ERVV-2B6SEH9 535 aa12.83□□□□□ -0.36
SF3B2-204ENST00000525207 HOXD11P31277 338 aaPredicted RBP12.83□□□□□ -0.36
SF3B2-204ENST00000525207 MTHFSP49914 203 aa12.83□□□□□ -0.36
SF3B2-204ENST00000525207 AMIGO3Q86WK7 504 aa12.83□□□□□ -0.36
SF3B2-204ENST00000525207 LINC00116Q8NCU8 138 aa12.83□□□□□ -0.36
SF3B2-204ENST00000525207 FLAD1Q8NFF5 587 aa12.83□□□□□ -0.36
SF3B2-204ENST00000525207 ATG3Q9NT62 314 aa12.83□□□□□ -0.36
SF3B2-204ENST00000525207 MYH14Q7Z406 1995 aaKnown RBP12.82□□□□□ -0.36
SF3B2-204ENST00000525207 ITPK1Q13572 414 aa12.82□□□□□ -0.36
SF3B2-204ENST00000525207 C1orf141Q5JVX7 400 aa12.82□□□□□ -0.36
SF3B2-204ENST00000525207 UTRNP46939 3433 aa12.82□□□□□ -0.36
SF3B2-204ENST00000525207 UBR2Q8IWV8 1755 aa12.81□□□□□ -0.36
SF3B2-204ENST00000525207 YY1P25490 414 aa12.81□□□□□ -0.36
SF3B2-204ENST00000525207 SSFA2P28290 1259 aa12.81□□□□□ -0.36
SF3B2-204ENST00000525207 MSL1Q68DK7 614 aa12.81□□□□□ -0.36
SF3B2-204ENST00000525207 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.8□□□□□ -0.36
SF3B2-204ENST00000525207 PHF14O94880 888 aa12.8□□□□□ -0.36
SF3B2-204ENST00000525207 ATP6V1AP38606 617 aa12.8□□□□□ -0.36
SF3B2-204ENST00000525207 KLHL34Q8N239 644 aa12.8□□□□□ -0.36
SF3B2-204ENST00000525207 SIPA1L3O60292 1781 aaPredicted RBP12.79□□□□□ -0.36
SF3B2-204ENST00000525207 KIF13BQ9NQT8 1826 aa12.79□□□□□ -0.36
SF3B2-204ENST00000525207 GNPATO15228 680 aa12.79□□□□□ -0.36
SF3B2-204ENST00000525207 DIAPH1O60610 1272 aaKnown RBP12.79□□□□□ -0.36
SF3B2-204ENST00000525207 CABP4P57796 275 aa12.79□□□□□ -0.36
SF3B2-204ENST00000525207 SLC4A9Q96Q91 983 aa12.79□□□□□ -0.36
SF3B2-204ENST00000525207 KCPQ6ZWJ8 1503 aa12.78□□□□□ -0.36
SF3B2-204ENST00000525207 HMOX1P09601 288 aa12.78□□□□□ -0.36
SF3B2-204ENST00000525207 AKAP4Q5JQC9 854 aa12.78□□□□□ -0.36
SF3B2-204ENST00000525207 SMIM5Q71RC9 77 aa12.78□□□□□ -0.36
SF3B2-204ENST00000525207 NLGN2Q8NFZ4 835 aa12.78□□□□□ -0.36
SF3B2-204ENST00000525207 CNTNAP4Q9C0A0 1308 aa12.78□□□□□ -0.36
SF3B2-204ENST00000525207 KIAA1551Q9HCM1 1747 aa12.77□□□□□ -0.36
SF3B2-204ENST00000525207 RBM42Q9BTD8 480 aaKnown RBP12.76□□□□□ -0.37
SF3B2-204ENST00000525207 GOLGB1Q14789 3259 aaKnown RBP12.76□□□□□ -0.37
SF3B2-204ENST00000525207 CNGB1Q14028 1251 aaPredicted RBP12.75□□□□□ -0.37
SF3B2-204ENST00000525207 NFATC2IPQ8NCF5 419 aa12.75□□□□□ -0.37
SF3B2-204ENST00000525207 SLC52A2Q9HAB3 445 aa12.75□□□□□ -0.37
SF3B2-204ENST00000525207 MTHFSDQ2M296 383 aaKnown RBP12.74□□□□□ -0.37
SF3B2-204ENST00000525207 RC3H1Q5TC82 1133 aaKnown RBP12.74□□□□□ -0.37
SF3B2-204ENST00000525207 RTCBQ9Y3I0 505 aaKnown RBP12.74□□□□□ -0.37
SF3B2-204ENST00000525207 RNMTO43148 476 aaKnown RBP12.73□□□□□ -0.37
SF3B2-204ENST00000525207 PTCD1O75127 700 aaKnown RBP12.73□□□□□ -0.37
SF3B2-204ENST00000525207 GPR162Q16538 588 aa12.73□□□□□ -0.37
SF3B2-204ENST00000525207 CD2APQ9Y5K6 639 aa12.73□□□□□ -0.37
SF3B2-204ENST00000525207 BRCA1P38398 1863 aaKnown RBP12.73□□□□□ -0.37
SF3B2-204ENST00000525207 C10orf71Q711Q0 1435 aa12.72□□□□□ -0.37
SF3B2-204ENST00000525207 U2SURPO15042 1029 aaKnown RBP12.72□□□□□ -0.37
SF3B2-204ENST00000525207 LGR6Q9HBX8 967 aa12.72□□□□□ -0.37
SF3B2-204ENST00000525207 N4BP2Q86UW6 1770 aaPredicted RBP12.71□□□□□ -0.37
SF3B2-204ENST00000525207 SCN7AQ01118 1682 aa12.71□□□□□ -0.37
SF3B2-204ENST00000525207 RPS6KA4O75676 772 aa12.71□□□□□ -0.37
SF3B2-204ENST00000525207 YBX3P16989 372 aaKnown RBP eCLIP12.71□□□□□ -0.37
SF3B2-204ENST00000525207 CRKLP46109 303 aaKnown RBP12.71□□□□□ -0.37
SF3B2-204ENST00000525207 PELP1Q8IZL8 1130 aaKnown RBP12.71□□□□□ -0.37
SF3B2-204ENST00000525207 CFAP53Q96M91 514 aa12.71□□□□□ -0.37
SF3B2-204ENST00000525207 PXDNLA1KZ92 1463 aa12.71□□□□□ -0.38
SF3B2-204ENST00000525207 PPP2R1AP30153 589 aa12.7□□□□□ -0.38
SF3B2-204ENST00000525207 TRAPPC3LQ5T215 181 aa12.7□□□□□ -0.38
SF3B2-204ENST00000525207 GAS2L2Q8NHY3 880 aa12.7□□□□□ -0.38
SF3B2-204ENST00000525207 CEMIPQ8WUJ3 1361 aa12.69□□□□□ -0.38
SF3B2-204ENST00000525207 MMP10P09238 476 aa12.69□□□□□ -0.38
SF3B2-204ENST00000525207 GYS1P13807 737 aa12.69□□□□□ -0.38
SF3B2-204ENST00000525207 SLC39A6Q13433 755 aa12.69□□□□□ -0.38
SF3B2-204ENST00000525207 ZNF784Q8NCA9 323 aaPredicted RBP12.69□□□□□ -0.38
SF3B2-204ENST00000525207 ARHGEF1Q92888 912 aaKnown RBP12.69□□□□□ -0.38
SF3B2-204ENST00000525207 RSPH6AQ9H0K4 717 aa12.69□□□□□ -0.38
SF3B2-204ENST00000525207 USP42Q9H9J4 1324 aaKnown RBP12.68□□□□□ -0.38
SF3B2-204ENST00000525207 PRKAR2BP31323 418 aa12.68□□□□□ -0.38
SF3B2-204ENST00000525207 DNAJC10Q8IXB1 793 aa12.68□□□□□ -0.38
SF3B2-204ENST00000525207 DLG5Q8TDM6 1919 aa12.68□□□□□ -0.38
SF3B2-204ENST00000525207 NRXN2Q9P2S2 1712 aa12.68□□□□□ -0.38
SF3B2-204ENST00000525207 COL15A1P39059 1388 aa12.68□□□□□ -0.38
SF3B2-204ENST00000525207 SOS1Q07889 1333 aaPredicted RBP12.67□□□□□ -0.38
SF3B2-204ENST00000525207 GNAT3A8MTJ3 354 aa12.67□□□□□ -0.38
SF3B2-204ENST00000525207 GRIN3BO60391 1043 aa12.67□□□□□ -0.38
SF3B2-204ENST00000525207 RFC4P35249 363 aa12.67□□□□□ -0.38
SF3B2-204ENST00000525207 NLGN1Q8N2Q7 840 aa12.67□□□□□ -0.38
SF3B2-204ENST00000525207 CCDC87Q9NVE4 849 aa12.67□□□□□ -0.38
SF3B2-204ENST00000525207 AFDNP55196 1824 aaKnown RBP12.67□□□□□ -0.38
SF3B2-204ENST00000525207 ARFGEF1Q9Y6D6 1849 aa12.67□□□□□ -0.38
SF3B2-204ENST00000525207 BCORQ6W2J9 1755 aa12.66□□□□□ -0.38
SF3B2-204ENST00000525207 INTS5Q6P9B9 1019 aaKnown RBP12.66□□□□□ -0.38
SF3B2-204ENST00000525207 VSIG10Q8N0Z9 540 aa12.66□□□□□ -0.38
SF3B2-204ENST00000525207 NUDCQ9Y266 331 aa12.66□□□□□ -0.38
SF3B2-204ENST00000525207 LAMB4A4D0S4 1761 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms