RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 FAM117AQ9C073 453 aa5.8□□□□□ -1.48
CSDE1-209ENST00000525132 MTFR1LQ9H019 292 aa5.8□□□□□ -1.48
CSDE1-209ENST00000525132 VCANP13611 3396 aa5.8□□□□□ -1.48
CSDE1-209ENST00000525132 EHBP1L1Q8N3D4 1523 aa5.79□□□□□ -1.48
CSDE1-209ENST00000525132 KDM4AO75164 1064 aa5.79□□□□□ -1.48
CSDE1-209ENST00000525132 USP46P62068 366 aa5.79□□□□□ -1.48
CSDE1-209ENST00000525132 LAPTM4AQ15012 233 aa5.79□□□□□ -1.48
CSDE1-209ENST00000525132 KMT5BQ4FZB7 885 aa5.79□□□□□ -1.48
CSDE1-209ENST00000525132 BLOC1S3Q6QNY0 202 aa5.79□□□□□ -1.48
CSDE1-209ENST00000525132 AFAP1Q8N556 730 aa5.79□□□□□ -1.48
CSDE1-209ENST00000525132 HLA-CQ95604 372 aa5.79□□□□□ -1.48
CSDE1-209ENST00000525132 BEGAINQ9BUH8 593 aa5.79□□□□□ -1.48
CSDE1-209ENST00000525132 SALL2Q9Y467 1007 aaPredicted RBP5.79□□□□□ -1.48
CSDE1-209ENST00000525132 FMN1Q68DA7 1419 aa5.79□□□□□ -1.48
CSDE1-209ENST00000525132 CFAP74Q9C0B2 1584 aa5.79□□□□□ -1.48
CSDE1-209ENST00000525132 ARHGEF28Q8N1W1 1705 aaKnown RBP5.79□□□□□ -1.48
CSDE1-209ENST00000525132 KDM5AP29375 1690 aaKnown RBP5.79□□□□□ -1.48
CSDE1-209ENST00000525132 SYNGAP1Q96PV0 1343 aa5.78□□□□□ -1.48
CSDE1-209ENST00000525132 RNF40O75150 1001 aa5.78□□□□□ -1.48
CSDE1-209ENST00000525132 ATP6V1AP38606 617 aa5.78□□□□□ -1.48
CSDE1-209ENST00000525132 SLC4A3P48751 1232 aa5.78□□□□□ -1.48
CSDE1-209ENST00000525132 TUSC1Q2TAM9 212 aa5.78□□□□□ -1.48
CSDE1-209ENST00000525132 RDH13Q8NBN7 331 aa5.78□□□□□ -1.48
CSDE1-209ENST00000525132 SPTBN5Q9NRC6 3674 aaKnown RBP5.78□□□□□ -1.48
CSDE1-209ENST00000525132 UGGT1Q9NYU2 1555 aa5.78□□□□□ -1.48
CSDE1-209ENST00000525132 PCDHGC3Q9UN70 934 aa5.78□□□□□ -1.48
CSDE1-209ENST00000525132 ADGRB2O60241 1585 aa5.77□□□□□ -1.49
CSDE1-209ENST00000525132 SPTLC1O15269 473 aa5.77□□□□□ -1.49
CSDE1-209ENST00000525132 KRT37O76014 449 aa5.77□□□□□ -1.49
CSDE1-209ENST00000525132 MYSM1Q5VVJ2 828 aa5.77□□□□□ -1.49
CSDE1-209ENST00000525132 ALYREFQ86V81 257 aaKnown RBP5.77□□□□□ -1.49
CSDE1-209ENST00000525132 ZNF516Q92618 1163 aa5.77□□□□□ -1.49
CSDE1-209ENST00000525132 TBC1D2Q9BYX2 928 aa5.77□□□□□ -1.49
CSDE1-209ENST00000525132 IL21Q9HBE4 155 aa5.77□□□□□ -1.49
CSDE1-209ENST00000525132 STK17AQ9UEE5 414 aa5.77□□□□□ -1.49
CSDE1-209ENST00000525132 PCDHB3Q9Y5E6 796 aa5.77□□□□□ -1.49
CSDE1-209ENST00000525132 TNRQ92752 1358 aa5.77□□□□□ -1.49
CSDE1-209ENST00000525132 MOXD2PA6NHM9 499 aa5.76□□□□□ -1.49
CSDE1-209ENST00000525132 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.76□□□□□ -1.49
CSDE1-209ENST00000525132 ZPR1O75312 459 aa5.76□□□□□ -1.49
CSDE1-209ENST00000525132 PPP1R15AO75807 674 aaPredicted RBP5.76□□□□□ -1.49
CSDE1-209ENST00000525132 LTKP29376 864 aa5.76□□□□□ -1.49
CSDE1-209ENST00000525132 PUS10Q3MIT2 529 aaKnown RBP5.76□□□□□ -1.49
CSDE1-209ENST00000525132 SH3D19Q5HYK7 790 aa5.76□□□□□ -1.49
CSDE1-209ENST00000525132 RSPH4AQ5TD94 716 aa5.76□□□□□ -1.49
CSDE1-209ENST00000525132 RSBN1LQ6PCB5 846 aaPredicted RBP5.76□□□□□ -1.49
CSDE1-209ENST00000525132 SLC27A5Q9Y2P5 690 aa5.76□□□□□ -1.49
CSDE1-209ENST00000525132 TET3O43151 1660 aa5.75□□□□□ -1.49
CSDE1-209ENST00000525132 GUCA2AQ02747 115 aa5.75□□□□□ -1.49
CSDE1-209ENST00000525132 BRICD5Q6PL45 260 aa5.75□□□□□ -1.49
CSDE1-209ENST00000525132 SCUBE3Q8IX30 993 aa5.75□□□□□ -1.49
CSDE1-209ENST00000525132 SMC1BQ8NDV3 1235 aa5.75□□□□□ -1.49
CSDE1-209ENST00000525132 DDRGK1Q96HY6 314 aa5.75□□□□□ -1.49
CSDE1-209ENST00000525132 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.75□□□□□ -1.49
CSDE1-209ENST00000525132 GOPCQ9HD26 462 aa5.75□□□□□ -1.49
CSDE1-209ENST00000525132 CCDC9Q9Y3X0 531 aaKnown RBP5.75□□□□□ -1.49
CSDE1-209ENST00000525132 TLL1O43897 1013 aa5.74□□□□□ -1.49
CSDE1-209ENST00000525132 COPS2P61201 443 aa5.74□□□□□ -1.49
CSDE1-209ENST00000525132 MAP3K12Q12852 859 aa5.74□□□□□ -1.49
CSDE1-209ENST00000525132 COL9A2Q14055 689 aaPredicted RBP5.74□□□□□ -1.49
CSDE1-209ENST00000525132 NEUROD2Q15784 382 aa5.74□□□□□ -1.49
CSDE1-209ENST00000525132 RNF19BQ6ZMZ0 732 aa5.74□□□□□ -1.49
CSDE1-209ENST00000525132 LIMD1Q9UGP4 676 aa5.74□□□□□ -1.49
CSDE1-209ENST00000525132 ABCA6Q8N139 1617 aa5.74□□□□□ -1.49
CSDE1-209ENST00000525132 ATF3P18847 181 aa5.73□□□□□ -1.49
CSDE1-209ENST00000525132 NDUFV2P19404 249 aa5.73□□□□□ -1.49
CSDE1-209ENST00000525132 KCNC4Q03721 635 aa5.73□□□□□ -1.49
CSDE1-209ENST00000525132 FAM160A2Q8N612 972 aaPredicted RBP5.73□□□□□ -1.49
CSDE1-209ENST00000525132 NKX2-3Q8TAU0 364 aa5.73□□□□□ -1.49
CSDE1-209ENST00000525132 P2RX7Q99572 595 aaKnown RBP5.73□□□□□ -1.49
CSDE1-209ENST00000525132 ABCC5O15440 1437 aa5.73□□□□□ -1.49
CSDE1-209ENST00000525132 ERBB4Q15303 1308 aa5.73□□□□□ -1.49
CSDE1-209ENST00000525132 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.72□□□□□ -1.49
CSDE1-209ENST00000525132 NR1I2O75469 434 aa5.72□□□□□ -1.49
CSDE1-209ENST00000525132 ADH1BP00325 375 aa5.72□□□□□ -1.49
CSDE1-209ENST00000525132 DGKZQ13574 1117 aa5.72□□□□□ -1.49
CSDE1-209ENST00000525132 DIXDC1Q155Q3 683 aa5.72□□□□□ -1.49
CSDE1-209ENST00000525132 MSS51Q4VC12 460 aa5.72□□□□□ -1.49
CSDE1-209ENST00000525132 C14orf37Q86TY3 774 aa5.72□□□□□ -1.49
CSDE1-209ENST00000525132 TXNDC2Q86VQ3 553 aa5.72□□□□□ -1.49
CSDE1-209ENST00000525132 KRTAP1-3Q8IUG1 177 aa5.72□□□□□ -1.49
CSDE1-209ENST00000525132 CCDC24Q8N4L8 307 aa5.72□□□□□ -1.49
CSDE1-209ENST00000525132 PCDHB15Q9Y5E8 787 aa5.72□□□□□ -1.49
CSDE1-209ENST00000525132 ASXL1Q8IXJ9 1541 aa5.72□□□□□ -1.49
CSDE1-209ENST00000525132 WRNQ14191 1432 aaPredicted RBP eCLIP5.72□□□□□ -1.49
CSDE1-209ENST00000525132 CROCC2H7BZ55 1655 aa5.72□□□□□ -1.49
CSDE1-209ENST00000525132 MROH1Q8NDA8 1641 aa5.71□□□□□ -1.5
CSDE1-209ENST00000525132 TMEM265A0A087WTH1 108 aa5.71□□□□□ -1.5
CSDE1-209ENST00000525132 LILRB3O75022 631 aa5.71□□□□□ -1.5
CSDE1-209ENST00000525132 FDX1P10109 184 aa5.71□□□□□ -1.5
CSDE1-209ENST00000525132 MMP16P51512 607 aa5.71□□□□□ -1.5
CSDE1-209ENST00000525132 SKIV2LQ15477 1246 aaKnown RBP5.71□□□□□ -1.5
CSDE1-209ENST00000525132 VPS72Q15906 364 aa5.71□□□□□ -1.5
CSDE1-209ENST00000525132 NUTM1Q86Y26 1132 aa5.71□□□□□ -1.5
CSDE1-209ENST00000525132 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.71□□□□□ -1.5
CSDE1-209ENST00000525132 KRTAP9-2Q9BYQ4 174 aa5.71□□□□□ -1.5
CSDE1-209ENST00000525132 TULP4Q9NRJ4 1543 aa5.7□□□□□ -1.5
CSDE1-209ENST00000525132 KRTAP9-6A0A140TA67 174 aa5.7□□□□□ -1.5
CSDE1-209ENST00000525132 VEGFBP49765 207 aa5.7□□□□□ -1.5
CSDE1-209ENST00000525132 GRIPAP1Q4V328 841 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms