RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 MAP2P11137 1827 aaKnown RBP16.04■□□□□ 0.16
CAPN1-202ENST00000524773 COG3Q96JB2 828 aa16.04■□□□□ 0.16
CAPN1-202ENST00000524773 IL1RAPL2Q9NP60 686 aa16.04■□□□□ 0.16
CAPN1-202ENST00000524773 RGS12O14924 1447 aa16.04■□□□□ 0.16
CAPN1-202ENST00000524773 RPAP2Q8IXW5 612 aaPredicted RBP16.03■□□□□ 0.16
CAPN1-202ENST00000524773 PNMA6EA0A0J9YXQ4 647 aa16.03■□□□□ 0.16
CAPN1-202ENST00000524773 HSP90AB2PQ58FF8 381 aa16.02■□□□□ 0.16
CAPN1-202ENST00000524773 USP48Q86UV5 1035 aa16.02■□□□□ 0.16
CAPN1-202ENST00000524773 CPA1P15085 419 aa16.02■□□□□ 0.16
CAPN1-202ENST00000524773 DDX54Q8TDD1 881 aaKnown RBP16.02■□□□□ 0.16
CAPN1-202ENST00000524773 TSPY26PQ9H489 355 aa16.02■□□□□ 0.16
CAPN1-202ENST00000524773 A2ML1A8K2U0 1454 aa16.02■□□□□ 0.15
CAPN1-202ENST00000524773 EIF4A2Q14240 407 aaKnown RBP16.02■□□□□ 0.15
CAPN1-202ENST00000524773 BCL11BQ9C0K0 894 aaPredicted RBP16.02■□□□□ 0.15
CAPN1-202ENST00000524773 BRD1O95696 1058 aa16.01■□□□□ 0.15
CAPN1-202ENST00000524773 CCDC39Q9UFE4 941 aa16.01■□□□□ 0.15
CAPN1-202ENST00000524773 ANKRD26Q9UPS8 1709 aa16.01■□□□□ 0.15
CAPN1-202ENST00000524773 ESYT1Q9BSJ8 1104 aa16.01■□□□□ 0.15
CAPN1-202ENST00000524773 NUTM1Q86Y26 1132 aa16■□□□□ 0.15
CAPN1-202ENST00000524773 ZHX1Q9UKY1 873 aaPredicted RBP16■□□□□ 0.15
CAPN1-202ENST00000524773 CNPY2Q9Y2B0 182 aa16■□□□□ 0.15
CAPN1-202ENST00000524773 HCLS1P14317 486 aaPredicted RBP15.99■□□□□ 0.15
CAPN1-202ENST00000524773 LMOD3Q0VAK6 560 aa15.99■□□□□ 0.15
CAPN1-202ENST00000524773 HS1BP3Q53T59 392 aa15.99■□□□□ 0.15
CAPN1-202ENST00000524773 NUDT16Q96DE0 195 aaKnown RBP15.99■□□□□ 0.15
CAPN1-202ENST00000524773 CHMP3Q9Y3E7 222 aa15.99■□□□□ 0.15
CAPN1-202ENST00000524773 CHL1O00533 1208 aa15.98■□□□□ 0.15
CAPN1-202ENST00000524773 DLG5Q8TDM6 1919 aa15.98■□□□□ 0.15
CAPN1-202ENST00000524773 KCNA4P22459 653 aa15.98■□□□□ 0.15
CAPN1-202ENST00000524773 TNRQ92752 1358 aa15.98■□□□□ 0.15
CAPN1-202ENST00000524773 FIBPO43427 364 aa15.97■□□□□ 0.15
CAPN1-202ENST00000524773 MX1P20591 662 aa15.97■□□□□ 0.15
CAPN1-202ENST00000524773 CHMLP26374 656 aa15.97■□□□□ 0.15
CAPN1-202ENST00000524773 SASS6Q6UVJ0 657 aa15.97■□□□□ 0.15
CAPN1-202ENST00000524773 TSPYL4Q9UJ04 414 aa15.97■□□□□ 0.15
CAPN1-202ENST00000524773 PRDM4Q9UKN5 801 aa15.97■□□□□ 0.15
CAPN1-202ENST00000524773 KIAA2012Q0VF49 1180 aa15.96■□□□□ 0.15
CAPN1-202ENST00000524773 SRCIN1Q9C0H9 1055 aa15.96■□□□□ 0.15
CAPN1-202ENST00000524773 CPS1P31327 1500 aa15.96■□□□□ 0.15
CAPN1-202ENST00000524773 ALKQ9UM73 1620 aa15.96■□□□□ 0.15
CAPN1-202ENST00000524773 WASLO00401 505 aaPredicted RBP15.96■□□□□ 0.15
CAPN1-202ENST00000524773 MBD3O95983 291 aa15.96■□□□□ 0.15
CAPN1-202ENST00000524773 FKBP5Q13451 457 aaPredicted RBP15.96■□□□□ 0.14
CAPN1-202ENST00000524773 ADCY5O95622 1261 aa15.95■□□□□ 0.14
CAPN1-202ENST00000524773 GIMAP6Q6P9H5 292 aa15.95■□□□□ 0.14
CAPN1-202ENST00000524773 SPC24Q8NBT2 197 aa15.95■□□□□ 0.14
CAPN1-202ENST00000524773 LRRFIP2Q9Y608 721 aaKnown RBP15.95■□□□□ 0.14
CAPN1-202ENST00000524773 KIF20BQ96Q89 1820 aa15.95■□□□□ 0.14
CAPN1-202ENST00000524773 CDC42BPGQ6DT37 1551 aa15.95■□□□□ 0.14
CAPN1-202ENST00000524773 HMMRO75330 724 aa15.95■□□□□ 0.14
CAPN1-202ENST00000524773 HDGFP51858 240 aaKnown RBP15.95■□□□□ 0.14
CAPN1-202ENST00000524773 LRRCC1Q9C099 1032 aa15.95■□□□□ 0.14
CAPN1-202ENST00000524773 CEBPAP49715 358 aaPredicted RBP15.94■□□□□ 0.14
CAPN1-202ENST00000524773 CBX1P83916 185 aa15.94■□□□□ 0.14
CAPN1-202ENST00000524773 GNAI2P04899 355 aa15.93■□□□□ 0.14
CAPN1-202ENST00000524773 CSPP1Q1MSJ5 1256 aa15.93■□□□□ 0.14
CAPN1-202ENST00000524773 CUL4AQ13619 759 aa15.93■□□□□ 0.14
CAPN1-202ENST00000524773 MTHFSDQ2M296 383 aaKnown RBP15.93■□□□□ 0.14
CAPN1-202ENST00000524773 ZNF710Q8N1W2 664 aa15.93■□□□□ 0.14
CAPN1-202ENST00000524773 SPG7Q9UQ90 795 aa15.93■□□□□ 0.14
CAPN1-202ENST00000524773 DYNC1I1O14576 645 aa15.93■□□□□ 0.14
CAPN1-202ENST00000524773 AP5Z1O43299 807 aa15.93■□□□□ 0.14
CAPN1-202ENST00000524773 TCHHQ07283 1943 aa15.92■□□□□ 0.14
CAPN1-202ENST00000524773 RASEFQ8IZ41 740 aa15.92■□□□□ 0.14
CAPN1-202ENST00000524773 IGSF3O75054 1194 aa15.92■□□□□ 0.14
CAPN1-202ENST00000524773 LARGE1O95461 756 aa15.92■□□□□ 0.14
CAPN1-202ENST00000524773 MCCP23508 829 aa15.92■□□□□ 0.14
CAPN1-202ENST00000524773 TERF1P54274 439 aa15.92■□□□□ 0.14
CAPN1-202ENST00000524773 NOLC1Q14978 699 aaKnown RBP eCLIP15.92■□□□□ 0.14
CAPN1-202ENST00000524773 SPDYE4A6NLX3 237 aa15.91■□□□□ 0.14
CAPN1-202ENST00000524773 PRR36Q9H6K5 1346 aa15.91■□□□□ 0.14
CAPN1-202ENST00000524773 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.9■□□□□ 0.14
CAPN1-202ENST00000524773 PTPRCP08575 1304 aa15.9■□□□□ 0.14
CAPN1-202ENST00000524773 METP08581 1390 aa15.9■□□□□ 0.14
CAPN1-202ENST00000524773 COL9A3Q14050 684 aaPredicted RBP15.9■□□□□ 0.14
CAPN1-202ENST00000524773 FAM173BQ6P4H8 233 aa15.9■□□□□ 0.14
CAPN1-202ENST00000524773 CWC27Q6UX04 472 aaKnown RBP15.9■□□□□ 0.14
CAPN1-202ENST00000524773 OSBPL3Q9H4L5 887 aa15.9■□□□□ 0.14
CAPN1-202ENST00000524773 CCDC61Q9Y6R9 512 aa15.9■□□□□ 0.14
CAPN1-202ENST00000524773 RPAP1Q9BWH6 1393 aaPredicted RBP15.89■□□□□ 0.13
CAPN1-202ENST00000524773 MAP3K19Q56UN5 1328 aa15.89■□□□□ 0.13
CAPN1-202ENST00000524773 SALL3Q9BXA9 1300 aa15.89■□□□□ 0.13
CAPN1-202ENST00000524773 AK2P54819 239 aa15.89■□□□□ 0.13
CAPN1-202ENST00000524773 FLIIQ13045 1269 aa15.89■□□□□ 0.13
CAPN1-202ENST00000524773 NUTM2GQ5VZR2 741 aa15.89■□□□□ 0.13
CAPN1-202ENST00000524773 RTF1Q92541 710 aaKnown RBP15.89■□□□□ 0.13
CAPN1-202ENST00000524773 PYCARDQ9ULZ3 195 aa15.89■□□□□ 0.13
CAPN1-202ENST00000524773 CDK12Q9NYV4 1490 aaPredicted RBP15.89■□□□□ 0.13
CAPN1-202ENST00000524773 KIF24Q5T7B8 1368 aa15.88■□□□□ 0.13
CAPN1-202ENST00000524773 EDC4Q6P2E9 1401 aaKnown RBP15.88■□□□□ 0.13
CAPN1-202ENST00000524773 SYAP1Q96A49 352 aaPredicted RBP15.88■□□□□ 0.13
CAPN1-202ENST00000524773 TMEM2Q9UHN6 1383 aa15.88■□□□□ 0.13
CAPN1-202ENST00000524773 SYT1P21579 422 aa15.88■□□□□ 0.13
CAPN1-202ENST00000524773 MCM5P33992 734 aa15.88■□□□□ 0.13
CAPN1-202ENST00000524773 DNM1Q05193 864 aaKnown RBP15.88■□□□□ 0.13
CAPN1-202ENST00000524773 CAMK4Q16566 473 aa15.88■□□□□ 0.13
CAPN1-202ENST00000524773 SURF6O75683 361 aaKnown RBP15.87■□□□□ 0.13
CAPN1-202ENST00000524773 FERMT3Q86UX7 667 aa15.87■□□□□ 0.13
CAPN1-202ENST00000524773 CCDC83Q8IWF9 413 aa15.87■□□□□ 0.13
CAPN1-202ENST00000524773 LTV1Q96GA3 475 aaPredicted RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms