RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 ATG3Q9NT62 314 aa20.04■□□□□ 0.8
SF3B2-202ENST00000524475 C5P01031 1676 aa20.03■□□□□ 0.8
SF3B2-202ENST00000524475 MAPK8IP3Q9UPT6 1336 aa20.03■□□□□ 0.8
SF3B2-202ENST00000524475 QSER1Q2KHR3 1735 aa20.03■□□□□ 0.8
SF3B2-202ENST00000524475 NFATC2IPQ8NCF5 419 aa20.03■□□□□ 0.8
SF3B2-202ENST00000524475 CCNL1Q9UK58 526 aaPredicted RBP20.03■□□□□ 0.8
SF3B2-202ENST00000524475 ASAP1Q9ULH1 1129 aa20.03■□□□□ 0.8
SF3B2-202ENST00000524475 NFE2L2Q16236 605 aa20.02■□□□□ 0.8
SF3B2-202ENST00000524475 IL17REQ8NFR9 667 aa20.02■□□□□ 0.8
SF3B2-202ENST00000524475 ANO8Q9HCE9 1232 aaPredicted RBP20.02■□□□□ 0.8
SF3B2-202ENST00000524475 ADAMTS8Q9UP79 889 aa20.01■□□□□ 0.79
SF3B2-202ENST00000524475 LOC102724428A0A0B4J2F2 783 aa20■□□□□ 0.79
SF3B2-202ENST00000524475 SIK1P57059 783 aa20■□□□□ 0.79
SF3B2-202ENST00000524475 SLC15A2Q16348 729 aa20■□□□□ 0.79
SF3B2-202ENST00000524475 UBR2Q8IWV8 1755 aa20■□□□□ 0.79
SF3B2-202ENST00000524475 R3HDM1Q15032 1099 aaKnown RBP19.99■□□□□ 0.79
SF3B2-202ENST00000524475 RTF1Q92541 710 aaKnown RBP19.99■□□□□ 0.79
SF3B2-202ENST00000524475 AKT1S1Q96B36 256 aa19.99■□□□□ 0.79
SF3B2-202ENST00000524475 RUNDC1Q96C34 613 aa19.99■□□□□ 0.79
SF3B2-202ENST00000524475 STK32BQ9NY57 414 aa19.99■□□□□ 0.79
SF3B2-202ENST00000524475 SRCAPQ6ZRS2 3230 aa19.98■□□□□ 0.79
SF3B2-202ENST00000524475 CASZ1Q86V15 1759 aa19.98■□□□□ 0.79
SF3B2-202ENST00000524475 TEFQ10587 303 aa19.98■□□□□ 0.79
SF3B2-202ENST00000524475 C4BP0C0L5 1744 aa19.97■□□□□ 0.79
SF3B2-202ENST00000524475 COL5A3P25940 1745 aaPredicted RBP19.97■□□□□ 0.79
SF3B2-202ENST00000524475 CCDC184Q52MB2 194 aa19.97■□□□□ 0.79
SF3B2-202ENST00000524475 KCPQ6ZWJ8 1503 aa19.97■□□□□ 0.79
SF3B2-202ENST00000524475 ZNF827Q17R98 1081 aa19.96■□□□□ 0.79
SF3B2-202ENST00000524475 PNISRQ8TF01 805 aaKnown RBP19.96■□□□□ 0.79
SF3B2-202ENST00000524475 MRS2Q9HD23 443 aa19.96■□□□□ 0.79
SF3B2-202ENST00000524475 TUBGCP6Q96RT7 1819 aa19.95■□□□□ 0.78
SF3B2-202ENST00000524475 PSDA5PKW4 1024 aaPredicted RBP19.95■□□□□ 0.78
SF3B2-202ENST00000524475 TMPOP42166 694 aaKnown RBP19.95■□□□□ 0.78
SF3B2-202ENST00000524475 LMOD3Q0VAK6 560 aa19.94■□□□□ 0.78
SF3B2-202ENST00000524475 SLC4A9Q96Q91 983 aa19.94■□□□□ 0.78
SF3B2-202ENST00000524475 TJP1Q07157 1748 aa19.93■□□□□ 0.78
SF3B2-202ENST00000524475 ATP6V1AP38606 617 aa19.93■□□□□ 0.78
SF3B2-202ENST00000524475 KCNQ4P56696 695 aa19.93■□□□□ 0.78
SF3B2-202ENST00000524475 MCM10Q7L590 875 aa19.93■□□□□ 0.78
SF3B2-202ENST00000524475 VSIG10Q8N0Z9 540 aa19.93■□□□□ 0.78
SF3B2-202ENST00000524475 LRP5O75197 1615 aa19.93■□□□□ 0.78
SF3B2-202ENST00000524475 RIPK4P57078 832 aa19.92■□□□□ 0.78
SF3B2-202ENST00000524475 ITPK1Q13572 414 aa19.92■□□□□ 0.78
SF3B2-202ENST00000524475 CCDC146Q8IYE0 955 aa19.92■□□□□ 0.78
SF3B2-202ENST00000524475 UBR3Q6ZT12 1888 aa19.92■□□□□ 0.78
SF3B2-202ENST00000524475 ZNF790Q6PG37 636 aa19.91■□□□□ 0.78
SF3B2-202ENST00000524475 TTC5Q8N0Z6 440 aa19.91■□□□□ 0.78
SF3B2-202ENST00000524475 RBM42Q9BTD8 480 aaKnown RBP19.91■□□□□ 0.78
SF3B2-202ENST00000524475 BTBD11A6QL63 1104 aa19.9■□□□□ 0.78
SF3B2-202ENST00000524475 PTCD1O75127 700 aaKnown RBP19.9■□□□□ 0.78
SF3B2-202ENST00000524475 SLC39A6Q13433 755 aa19.9■□□□□ 0.78
SF3B2-202ENST00000524475 DCTN1Q14203 1278 aa19.9■□□□□ 0.78
SF3B2-202ENST00000524475 RC3H1Q5TC82 1133 aaKnown RBP19.9■□□□□ 0.78
SF3B2-202ENST00000524475 LINC00116Q8NCU8 138 aa19.9■□□□□ 0.78
SF3B2-202ENST00000524475 CNTNAP4Q9C0A0 1308 aa19.9■□□□□ 0.78
SF3B2-202ENST00000524475 KDM3BQ7LBC6 1761 aa19.9■□□□□ 0.78
SF3B2-202ENST00000524475 TAF7Q15545 349 aaPredicted RBP19.89■□□□□ 0.77
SF3B2-202ENST00000524475 FLAD1Q8NFF5 587 aa19.89■□□□□ 0.77
SF3B2-202ENST00000524475 PNPLA7Q6ZV29 1317 aa19.88■□□□□ 0.77
SF3B2-202ENST00000524475 NCBP3Q53F19 620 aaKnown RBP19.88■□□□□ 0.77
SF3B2-202ENST00000524475 BABAM1Q9NWV8 329 aa19.88■□□□□ 0.77
SF3B2-202ENST00000524475 TFCP2L1Q9NZI6 479 aa19.88■□□□□ 0.77
SF3B2-202ENST00000524475 MYH14Q7Z406 1995 aaKnown RBP19.88■□□□□ 0.77
SF3B2-202ENST00000524475 HEG1Q9ULI3 1381 aa19.87■□□□□ 0.77
SF3B2-202ENST00000524475 SLC16A10Q8TF71 515 aa19.87■□□□□ 0.77
SF3B2-202ENST00000524475 AK7Q96M32 723 aa19.87■□□□□ 0.77
SF3B2-202ENST00000524475 COL24A1Q17RW2 1714 aa19.87■□□□□ 0.77
SF3B2-202ENST00000524475 SSFA2P28290 1259 aa19.86■□□□□ 0.77
SF3B2-202ENST00000524475 FMNL2Q96PY5 1086 aa19.86■□□□□ 0.77
SF3B2-202ENST00000524475 TRIM35Q9UPQ4 493 aa19.86■□□□□ 0.77
SF3B2-202ENST00000524475 CCER2I3L3R5 266 aa19.85■□□□□ 0.77
SF3B2-202ENST00000524475 ZNF496Q96IT1 587 aaPredicted RBP19.85■□□□□ 0.77
SF3B2-202ENST00000524475 TEX13AQ9BXU3 409 aaPredicted RBP19.85■□□□□ 0.77
SF3B2-202ENST00000524475 APAF1O14727 1248 aa19.84■□□□□ 0.77
SF3B2-202ENST00000524475 ADRA2BP18089 450 aa19.84■□□□□ 0.77
SF3B2-202ENST00000524475 MTFR1LQ9H019 292 aa19.84■□□□□ 0.77
SF3B2-202ENST00000524475 RRP7AQ9Y3A4 280 aaKnown RBP19.84■□□□□ 0.77
SF3B2-202ENST00000524475 DIEXFQ68CQ4 756 aaKnown RBP19.83■□□□□ 0.77
SF3B2-202ENST00000524475 DNAJC10Q8IXB1 793 aa19.83■□□□□ 0.77
SF3B2-202ENST00000524475 THUMPD2Q9BTF0 503 aaKnown RBP19.83■□□□□ 0.77
SF3B2-202ENST00000524475 PDGFDQ9GZP0 370 aaPredicted RBP19.83■□□□□ 0.77
SF3B2-202ENST00000524475 GNPATO15228 680 aa19.82■□□□□ 0.76
SF3B2-202ENST00000524475 CYP19A1P11511 503 aaPredicted RBP19.82■□□□□ 0.76
SF3B2-202ENST00000524475 CRKLP46109 303 aaKnown RBP19.82■□□□□ 0.76
SF3B2-202ENST00000524475 CCDC27Q2M243 656 aa19.82■□□□□ 0.76
SF3B2-202ENST00000524475 KCNQ3O43525 872 aa19.81■□□□□ 0.76
SF3B2-202ENST00000524475 RPS6KA4O75676 772 aa19.81■□□□□ 0.76
SF3B2-202ENST00000524475 STARD3NLO95772 234 aa19.81■□□□□ 0.76
SF3B2-202ENST00000524475 NEUROD2Q15784 382 aa19.81■□□□□ 0.76
SF3B2-202ENST00000524475 COL23A1Q86Y22 540 aaPredicted RBP19.81■□□□□ 0.76
SF3B2-202ENST00000524475 SPON1Q9HCB6 807 aa19.81■□□□□ 0.76
SF3B2-202ENST00000524475 RTCBQ9Y3I0 505 aaKnown RBP19.81■□□□□ 0.76
SF3B2-202ENST00000524475 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.8■□□□□ 0.76
SF3B2-202ENST00000524475 AMIGO3Q86WK7 504 aa19.8■□□□□ 0.76
SF3B2-202ENST00000524475 LAMB4A4D0S4 1761 aa19.8■□□□□ 0.76
SF3B2-202ENST00000524475 SNRPA1P09661 255 aaKnown RBP19.79■□□□□ 0.76
SF3B2-202ENST00000524475 CALD1Q05682 793 aaKnown RBP19.79■□□□□ 0.76
SF3B2-202ENST00000524475 INTS5Q6P9B9 1019 aaKnown RBP19.79■□□□□ 0.76
SF3B2-202ENST00000524475 NGEFQ8N5V2 710 aa19.79■□□□□ 0.76
SF3B2-202ENST00000524475 CCDC87Q9NVE4 849 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms