RNA–Protein interactions for RNA: ENST00000524074.1

PFDN1-207, Transcript of prefoldin subunit 1, humanhuman

TSL 5 BASIC

Gene PFDN1, Length 395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-207ENST00000524074 KCTD15Q96SI1 283 aaPredicted RBP13.17□□□□□ -0.3
PFDN1-207ENST00000524074 SMARCA5O60264 1052 aaPredicted RBP13.16□□□□□ -0.3
PFDN1-207ENST00000524074 ST18O60284 1047 aa13.16□□□□□ -0.3
PFDN1-207ENST00000524074 PRPF40AO75400 957 aaKnown RBP13.16□□□□□ -0.3
PFDN1-207ENST00000524074 SCTRP47872 440 aa13.16□□□□□ -0.3
PFDN1-207ENST00000524074 PLCB3Q01970 1234 aa13.16□□□□□ -0.3
PFDN1-207ENST00000524074 ALKBH2Q6NS38 261 aa13.16□□□□□ -0.3
PFDN1-207ENST00000524074 TMEM87AQ8NBN3 555 aa13.16□□□□□ -0.3
PFDN1-207ENST00000524074 DMRTB1Q96MA1 342 aa13.16□□□□□ -0.3
PFDN1-207ENST00000524074 PRKD2Q9BZL6 878 aa13.16□□□□□ -0.3
PFDN1-207ENST00000524074 ATAD2Q6PL18 1390 aa13.16□□□□□ -0.3
PFDN1-207ENST00000524074 TNS4Q8IZW8 715 aa13.15□□□□□ -0.3
PFDN1-207ENST00000524074 PIK3R5Q8WYR1 880 aa13.15□□□□□ -0.3
PFDN1-207ENST00000524074 SPATA32Q96LK8 384 aa13.15□□□□□ -0.3
PFDN1-207ENST00000524074 GDF10P55107 478 aa13.14□□□□□ -0.31
PFDN1-207ENST00000524074 PARP2Q9UGN5 583 aa13.14□□□□□ -0.31
PFDN1-207ENST00000524074 HS3ST6Q96QI5 342 aa13.13□□□□□ -0.31
PFDN1-207ENST00000524074 EIF1AXP47813 144 aaKnown RBP13.12□□□□□ -0.31
PFDN1-207ENST00000524074 SCNN1DP51172 638 aa13.12□□□□□ -0.31
PFDN1-207ENST00000524074 ATP2B2Q01814 1243 aa13.12□□□□□ -0.31
PFDN1-207ENST00000524074 EHHADHQ08426 723 aa13.12□□□□□ -0.31
PFDN1-207ENST00000524074 CC2D2BQ6DHV5 1058 aa13.12□□□□□ -0.31
PFDN1-207ENST00000524074 TRIM52Q96A61 297 aa13.12□□□□□ -0.31
PFDN1-207ENST00000524074 FAM161BQ96MY7 647 aa13.12□□□□□ -0.31
PFDN1-207ENST00000524074 DUSP9Q99956 384 aaKnown RBP13.12□□□□□ -0.31
PFDN1-207ENST00000524074 SAP130Q9H0E3 1048 aa13.12□□□□□ -0.31
PFDN1-207ENST00000524074 TSPAN10Q9H1Z9 355 aaPredicted RBP13.12□□□□□ -0.31
PFDN1-207ENST00000524074 FCF1Q9Y324 198 aaKnown RBP13.12□□□□□ -0.31
PFDN1-207ENST00000524074 ERVH48-1M5A8F1 160 aa13.11□□□□□ -0.31
PFDN1-207ENST00000524074 WASLO00401 505 aaPredicted RBP13.11□□□□□ -0.31
PFDN1-207ENST00000524074 SORBS3O60504 671 aa13.11□□□□□ -0.31
PFDN1-207ENST00000524074 SH3BP2P78314 561 aa13.11□□□□□ -0.31
PFDN1-207ENST00000524074 PDE3BQ13370 1112 aa13.11□□□□□ -0.31
PFDN1-207ENST00000524074 DSC3Q14574 896 aa13.11□□□□□ -0.31
PFDN1-207ENST00000524074 INTS6LQ5JSJ4 861 aaKnown RBP13.11□□□□□ -0.31
PFDN1-207ENST00000524074 ANKRD13DQ6ZTN6 518 aa13.11□□□□□ -0.31
PFDN1-207ENST00000524074 MTRQ99707 1265 aa13.11□□□□□ -0.31
PFDN1-207ENST00000524074 NISCHQ9Y2I1 1504 aa13.11□□□□□ -0.31
PFDN1-207ENST00000524074 PPP1R12BO60237 982 aaPredicted RBP13.1□□□□□ -0.31
PFDN1-207ENST00000524074 ERVK-9P63128 1117 aa13.1□□□□□ -0.31
PFDN1-207ENST00000524074 PSMD2Q13200 908 aa13.1□□□□□ -0.31
PFDN1-207ENST00000524074 TMC4Q7Z404 712 aa13.1□□□□□ -0.31
PFDN1-207ENST00000524074 NT5DC4Q86YG4 428 aa13.1□□□□□ -0.31
PFDN1-207ENST00000524074 OTUD5Q96G74 571 aa13.1□□□□□ -0.31
PFDN1-207ENST00000524074 CCDC87Q9NVE4 849 aa13.1□□□□□ -0.31
PFDN1-207ENST00000524074 VTI1BQ9UEU0 232 aa13.1□□□□□ -0.31
PFDN1-207ENST00000524074 SERTAD1Q9UHV2 236 aa13.1□□□□□ -0.31
PFDN1-207ENST00000524074 RAD51AP2Q09MP3 1159 aa13.09□□□□□ -0.31
PFDN1-207ENST00000524074 LDLRAD1Q5T700 205 aa13.09□□□□□ -0.31
PFDN1-207ENST00000524074 NYAP1Q6ZVC0 841 aa13.09□□□□□ -0.31
PFDN1-207ENST00000524074 VASH1Q7L8A9 365 aaPredicted RBP13.09□□□□□ -0.31
PFDN1-207ENST00000524074 STIM2Q9P246 746 aa13.09□□□□□ -0.31
PFDN1-207ENST00000524074 FZD6O60353 706 aa13.08□□□□□ -0.32
PFDN1-207ENST00000524074 INHAP05111 366 aa13.08□□□□□ -0.32
PFDN1-207ENST00000524074 RNF34Q969K3 372 aa13.08□□□□□ -0.32
PFDN1-207ENST00000524074 TANGO6Q9C0B7 1094 aa13.08□□□□□ -0.32
PFDN1-207ENST00000524074 METTL5Q9NRN9 209 aaKnown RBP13.08□□□□□ -0.32
PFDN1-207ENST00000524074 EPHA4P54764 986 aa13.07□□□□□ -0.32
PFDN1-207ENST00000524074 DAB2P98082 770 aa13.07□□□□□ -0.32
PFDN1-207ENST00000524074 ABTB2Q8N961 1025 aa13.07□□□□□ -0.32
PFDN1-207ENST00000524074 FAM129BQ96TA1 746 aa13.07□□□□□ -0.32
PFDN1-207ENST00000524074 OSBPL3Q9H4L5 887 aa13.07□□□□□ -0.32
PFDN1-207ENST00000524074 CCSER2Q9H7U1 834 aa13.07□□□□□ -0.32
PFDN1-207ENST00000524074 MAP4K5Q9Y4K4 846 aa13.07□□□□□ -0.32
PFDN1-207ENST00000524074 A0A1W2PRU2 124 aa13.06□□□□□ -0.32
PFDN1-207ENST00000524074 STAU1O95793 577 aaKnown RBP13.06□□□□□ -0.32
PFDN1-207ENST00000524074 THSD4Q6ZMP0 1018 aa13.06□□□□□ -0.32
PFDN1-207ENST00000524074 METTL16Q86W50 562 aaKnown RBP13.06□□□□□ -0.32
PFDN1-207ENST00000524074 GPR182O15218 404 aa13.05□□□□□ -0.32
PFDN1-207ENST00000524074 ALKBH8Q96BT7 664 aaKnown RBP13.05□□□□□ -0.32
PFDN1-207ENST00000524074 IL21Q9HBE4 155 aa13.05□□□□□ -0.32
PFDN1-207ENST00000524074 TNFRSF10BO14763 440 aa13.04□□□□□ -0.32
PFDN1-207ENST00000524074 S1PR4O95977 384 aa13.04□□□□□ -0.32
PFDN1-207ENST00000524074 FANCCQ00597 558 aa13.04□□□□□ -0.32
PFDN1-207ENST00000524074 COX20Q5RI15 118 aa13.04□□□□□ -0.32
PFDN1-207ENST00000524074 TGIF2Q9GZN2 237 aa13.04□□□□□ -0.32
PFDN1-207ENST00000524074 ETNK1Q9HBU6 452 aa13.04□□□□□ -0.32
PFDN1-207ENST00000524074 CYLDQ9NQC7 956 aa13.04□□□□□ -0.32
PFDN1-207ENST00000524074 POTEB3A0JP26 581 aa13.03□□□□□ -0.32
PFDN1-207ENST00000524074 PPM1GO15355 546 aaPredicted RBP13.03□□□□□ -0.32
PFDN1-207ENST00000524074 POTEBQ6S5H4 581 aa13.03□□□□□ -0.32
PFDN1-207ENST00000524074 SLC9A9Q8IVB4 645 aa13.03□□□□□ -0.32
PFDN1-207ENST00000524074 STAG2Q8N3U4 1231 aa13.03□□□□□ -0.32
PFDN1-207ENST00000524074 TINF2Q9BSI4 451 aa13.03□□□□□ -0.32
PFDN1-207ENST00000524074 WWC3Q9ULE0 1092 aa13.03□□□□□ -0.32
PFDN1-207ENST00000524074 IGHA2P01877 340 aa13.02□□□□□ -0.33
PFDN1-207ENST00000524074 VARSP26640 1264 aaKnown RBP13.02□□□□□ -0.33
PFDN1-207ENST00000524074 ZNF76P36508 570 aa13.02□□□□□ -0.33
PFDN1-207ENST00000524074 TBCELQ5QJ74 424 aa13.02□□□□□ -0.33
PFDN1-207ENST00000524074 ZNF516Q92618 1163 aa13.02□□□□□ -0.33
PFDN1-207ENST00000524074 SLC4A9Q96Q91 983 aa13.02□□□□□ -0.33
PFDN1-207ENST00000524074 C2orf49Q9BVC5 232 aaPredicted RBP13.02□□□□□ -0.33
PFDN1-207ENST00000524074 RNF19AQ9NV58 838 aa13.02□□□□□ -0.33
PFDN1-207ENST00000524074 CHMP3Q9Y3E7 222 aa13.02□□□□□ -0.33
PFDN1-207ENST00000524074 DHX9Q08211 1270 aaKnown RBP13.01□□□□□ -0.33
PFDN1-207ENST00000524074 ESCO1Q5FWF5 840 aa13.01□□□□□ -0.33
PFDN1-207ENST00000524074 ALG1LQ6GMV1 187 aa13.01□□□□□ -0.33
PFDN1-207ENST00000524074 DPH6Q7L8W6 267 aa13.01□□□□□ -0.33
PFDN1-207ENST00000524074 CYP2U1Q7Z449 544 aa13.01□□□□□ -0.33
PFDN1-207ENST00000524074 CAPN10Q9HC96 672 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms