RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 TRERF1Q96PN7 1200 aa7.36□□□□□ -1.23
PCM1-220ENST00000523896 PPP1R12CQ9BZL4 782 aa7.36□□□□□ -1.23
PCM1-220ENST00000523896 CENPCQ03188 943 aa7.35□□□□□ -1.23
PCM1-220ENST00000523896 TRIM22Q8IYM9 498 aa7.35□□□□□ -1.23
PCM1-220ENST00000523896 PHTF2Q8N3S3 785 aa7.35□□□□□ -1.23
PCM1-220ENST00000523896 NFATC2IPQ8NCF5 419 aa7.35□□□□□ -1.23
PCM1-220ENST00000523896 PALM3A6NDB9 673 aaPredicted RBP7.34□□□□□ -1.23
PCM1-220ENST00000523896 IL2RAP01589 272 aa7.34□□□□□ -1.23
PCM1-220ENST00000523896 TLR1Q15399 786 aa7.34□□□□□ -1.23
PCM1-220ENST00000523896 CFAP70Q5T0N1 1121 aa7.34□□□□□ -1.23
PCM1-220ENST00000523896 SVOPQ8N4V2 548 aa7.34□□□□□ -1.23
PCM1-220ENST00000523896 XAGE2Q96GT9 111 aa7.34□□□□□ -1.23
PCM1-220ENST00000523896 ATP9BO43861 1147 aa7.33□□□□□ -1.24
PCM1-220ENST00000523896 F11P03951 625 aa7.33□□□□□ -1.24
PCM1-220ENST00000523896 CSB-PGBD3P0DP91 1061 aa7.33□□□□□ -1.24
PCM1-220ENST00000523896 EML3Q32P44 896 aa7.33□□□□□ -1.24
PCM1-220ENST00000523896 HOMEZQ8IX15 550 aa7.33□□□□□ -1.24
PCM1-220ENST00000523896 PGBD3Q8N328 593 aa7.33□□□□□ -1.24
PCM1-220ENST00000523896 ZNF837Q96EG3 531 aaPredicted RBP7.33□□□□□ -1.24
PCM1-220ENST00000523896 A0A1B0GTH6 734 aa7.32□□□□□ -1.24
PCM1-220ENST00000523896 PIK3CDO00329 1044 aa7.32□□□□□ -1.24
PCM1-220ENST00000523896 SKIP12755 728 aa7.32□□□□□ -1.24
PCM1-220ENST00000523896 PHKA2P46019 1235 aa7.32□□□□□ -1.24
PCM1-220ENST00000523896 KRT76Q01546 638 aa7.32□□□□□ -1.24
PCM1-220ENST00000523896 MAP3K10Q02779 954 aa7.32□□□□□ -1.24
PCM1-220ENST00000523896 TSGA10IPQ3SY00 556 aa7.32□□□□□ -1.24
PCM1-220ENST00000523896 TBC1D9Q6ZT07 1266 aa7.32□□□□□ -1.24
PCM1-220ENST00000523896 NUCKS1Q9H1E3 243 aaKnown RBP7.32□□□□□ -1.24
PCM1-220ENST00000523896 TFIP11Q9UBB9 837 aaKnown RBP7.32□□□□□ -1.24
PCM1-220ENST00000523896 CHIC2Q9UKJ5 165 aa7.32□□□□□ -1.24
PCM1-220ENST00000523896 NSFL1CQ9UNZ2 370 aaKnown RBP7.32□□□□□ -1.24
PCM1-220ENST00000523896 MAFBQ9Y5Q3 323 aaPredicted RBP7.32□□□□□ -1.24
PCM1-220ENST00000523896 LZTS3O60299 673 aaPredicted RBP7.31□□□□□ -1.24
PCM1-220ENST00000523896 PPP1R15AO75807 674 aaPredicted RBP7.31□□□□□ -1.24
PCM1-220ENST00000523896 LORP23490 312 aaPredicted RBP7.31□□□□□ -1.24
PCM1-220ENST00000523896 GDF10P55107 478 aa7.31□□□□□ -1.24
PCM1-220ENST00000523896 PSME1Q06323 249 aa7.31□□□□□ -1.24
PCM1-220ENST00000523896 RNFT1Q5M7Z0 435 aa7.31□□□□□ -1.24
PCM1-220ENST00000523896 RHBDD1Q8TEB9 315 aa7.31□□□□□ -1.24
PCM1-220ENST00000523896 GTPBP3Q969Y2 492 aaKnown RBP7.31□□□□□ -1.24
PCM1-220ENST00000523896 ETNK1Q9HBU6 452 aa7.31□□□□□ -1.24
PCM1-220ENST00000523896 GPAMQ9HCL2 828 aa7.31□□□□□ -1.24
PCM1-220ENST00000523896 CUEDC1Q9NWM3 386 aaPredicted RBP7.31□□□□□ -1.24
PCM1-220ENST00000523896 NOD1Q9Y239 953 aa7.31□□□□□ -1.24
PCM1-220ENST00000523896 LOC100996750A0A140TA64 210 aa7.3□□□□□ -1.24
PCM1-220ENST00000523896 RNF225M0QZC1 329 aaPredicted RBP7.3□□□□□ -1.24
PCM1-220ENST00000523896 ADAMTS2O95450 1211 aa7.3□□□□□ -1.24
PCM1-220ENST00000523896 SRSF11Q05519 484 aaKnown RBP7.3□□□□□ -1.24
PCM1-220ENST00000523896 PLEKHM2Q8IWE5 1019 aa7.3□□□□□ -1.24
PCM1-220ENST00000523896 PBXIP1Q96AQ6 731 aa7.3□□□□□ -1.24
PCM1-220ENST00000523896 KRTAP4-6Q9BYQ5 205 aa7.3□□□□□ -1.24
PCM1-220ENST00000523896 PHF24Q9UPV7 400 aa7.3□□□□□ -1.24
PCM1-220ENST00000523896 USP17L5A8MUK1 530 aa7.29□□□□□ -1.24
PCM1-220ENST00000523896 GPR25O00155 361 aa7.29□□□□□ -1.24
PCM1-220ENST00000523896 INHAP05111 366 aa7.29□□□□□ -1.24
PCM1-220ENST00000523896 LMOD1P29536 600 aaPredicted RBP7.29□□□□□ -1.24
PCM1-220ENST00000523896 DBN1Q16643 649 aa7.29□□□□□ -1.24
PCM1-220ENST00000523896 C4orf17Q53FE4 359 aa7.29□□□□□ -1.24
PCM1-220ENST00000523896 EFHC2Q5JST6 749 aa7.29□□□□□ -1.24
PCM1-220ENST00000523896 FHDC1Q9C0D6 1143 aaPredicted RBP7.29□□□□□ -1.24
PCM1-220ENST00000523896 MBIPQ9NS73 344 aa7.29□□□□□ -1.24
PCM1-220ENST00000523896 USP17L3A6NCW0 530 aa7.28□□□□□ -1.24
PCM1-220ENST00000523896 USP17L4A6NCW7 530 aa7.28□□□□□ -1.24
PCM1-220ENST00000523896 BACH1O14867 736 aa7.28□□□□□ -1.24
PCM1-220ENST00000523896 RFX1P22670 979 aa7.28□□□□□ -1.24
PCM1-220ENST00000523896 SRPK2P78362 688 aaKnown RBP7.28□□□□□ -1.24
PCM1-220ENST00000523896 USP17L2Q6R6M4 530 aa7.28□□□□□ -1.24
PCM1-220ENST00000523896 USP17L1Q7RTZ2 530 aa7.28□□□□□ -1.24
PCM1-220ENST00000523896 ENAMQ9NRM1 1142 aa7.28□□□□□ -1.24
PCM1-220ENST00000523896 HRH3Q9Y5N1 445 aa7.28□□□□□ -1.24
PCM1-220ENST00000523896 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.27□□□□□ -1.25
PCM1-220ENST00000523896 SLURP2P0DP57 97 aa7.27□□□□□ -1.25
PCM1-220ENST00000523896 MX2P20592 715 aa7.27□□□□□ -1.25
PCM1-220ENST00000523896 PLA2G4AP47712 749 aa7.27□□□□□ -1.25
PCM1-220ENST00000523896 MARSP56192 900 aaKnown RBP7.27□□□□□ -1.25
PCM1-220ENST00000523896 LBRQ14739 615 aaKnown RBP7.27□□□□□ -1.25
PCM1-220ENST00000523896 TRIM50Q86XT4 487 aa7.27□□□□□ -1.25
PCM1-220ENST00000523896 PPARGC1BQ86YN6 1023 aaKnown RBP7.27□□□□□ -1.25
PCM1-220ENST00000523896 NIFKQ9BYG3 293 aaKnown RBP7.27□□□□□ -1.25
PCM1-220ENST00000523896 SERTAD1Q9UHV2 236 aa7.27□□□□□ -1.25
PCM1-220ENST00000523896 STAU1O95793 577 aaKnown RBP7.26□□□□□ -1.25
PCM1-220ENST00000523896 SCNN1DP51172 638 aa7.26□□□□□ -1.25
PCM1-220ENST00000523896 GTF2IP78347 998 aa7.26□□□□□ -1.25
PCM1-220ENST00000523896 NBPF1Q3BBV0 1214 aa7.26□□□□□ -1.25
PCM1-220ENST00000523896 ZNF385CQ66K41 422 aaPredicted RBP7.26□□□□□ -1.25
PCM1-220ENST00000523896 IGF1RP08069 1367 aa7.25□□□□□ -1.25
PCM1-220ENST00000523896 MSX1P28360 303 aa7.25□□□□□ -1.25
PCM1-220ENST00000523896 SMTNP53814 917 aa7.25□□□□□ -1.25
PCM1-220ENST00000523896 NCOA4Q13772 614 aa7.25□□□□□ -1.25
PCM1-220ENST00000523896 GAS6Q14393 721 aa7.25□□□□□ -1.25
PCM1-220ENST00000523896 KANK4Q5T7N3 995 aaPredicted RBP7.25□□□□□ -1.25
PCM1-220ENST00000523896 AIDAQ96BJ3 306 aa7.25□□□□□ -1.25
PCM1-220ENST00000523896 RUBCNLQ9H714 662 aa7.25□□□□□ -1.25
PCM1-220ENST00000523896 ADAMTS8Q9UP79 889 aa7.25□□□□□ -1.25
PCM1-220ENST00000523896 RBM19Q9Y4C8 960 aaKnown RBP7.25□□□□□ -1.25
PCM1-220ENST00000523896 TATP17735 454 aaPredicted RBP7.24□□□□□ -1.25
PCM1-220ENST00000523896 MAP2K3P46734 347 aa7.24□□□□□ -1.25
PCM1-220ENST00000523896 ATP1A2P50993 1020 aa7.24□□□□□ -1.25
PCM1-220ENST00000523896 DEPDC4Q8N2C3 294 aa7.24□□□□□ -1.25
PCM1-220ENST00000523896 C1orf216Q8TAB5 229 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms