RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 SLC52A2Q9HAB3 445 aa12.03□□□□□ -0.48
SDCBP-212ENST00000523483 TMOD3Q9NYL9 352 aa12.03□□□□□ -0.48
SDCBP-212ENST00000523483 FAM208AQ9UK61 1670 aaKnown RBP12.02□□□□□ -0.48
SDCBP-212ENST00000523483 CDCA7Q9BWT1 371 aaPredicted RBP12.02□□□□□ -0.48
SDCBP-212ENST00000523483 EP400Q96L91 3159 aa12.02□□□□□ -0.49
SDCBP-212ENST00000523483 ZNF853P0CG23 659 aa12.02□□□□□ -0.49
SDCBP-212ENST00000523483 PRIM1P49642 420 aaKnown RBP12.02□□□□□ -0.49
SDCBP-212ENST00000523483 NCBP3Q53F19 620 aaKnown RBP12.02□□□□□ -0.49
SDCBP-212ENST00000523483 SEPT12Q8IYM1 358 aa12.02□□□□□ -0.49
SDCBP-212ENST00000523483 MARCH10Q8NA82 808 aaPredicted RBP12.01□□□□□ -0.49
SDCBP-212ENST00000523483 KDM6AO15550 1401 aaPredicted RBP12.01□□□□□ -0.49
SDCBP-212ENST00000523483 SSH1Q8WYL5 1049 aa12.01□□□□□ -0.49
SDCBP-212ENST00000523483 RBM42Q9BTD8 480 aaKnown RBP12.01□□□□□ -0.49
SDCBP-212ENST00000523483 RARSP54136 660 aaKnown RBP12□□□□□ -0.49
SDCBP-212ENST00000523483 BARGINQ6ZT62 677 aa12□□□□□ -0.49
SDCBP-212ENST00000523483 ZNF330Q9Y3S2 320 aaPredicted RBP12□□□□□ -0.49
SDCBP-212ENST00000523483 CEMIPQ8WUJ3 1361 aa12□□□□□ -0.49
SDCBP-212ENST00000523483 PRAMEF22A3QJZ6 481 aa12□□□□□ -0.49
SDCBP-212ENST00000523483 RRP1P56182 461 aaKnown RBP12□□□□□ -0.49
SDCBP-212ENST00000523483 ZNF772Q68DY9 489 aaPredicted RBP12□□□□□ -0.49
SDCBP-212ENST00000523483 ZNF790Q6PG37 636 aa12□□□□□ -0.49
SDCBP-212ENST00000523483 VAMP4O75379 141 aa11.99□□□□□ -0.49
SDCBP-212ENST00000523483 ANXA1P04083 346 aa11.99□□□□□ -0.49
SDCBP-212ENST00000523483 ARXQ96QS3 562 aa11.99□□□□□ -0.49
SDCBP-212ENST00000523483 PIP4K2AP48426 406 aaPredicted RBP11.99□□□□□ -0.49
SDCBP-212ENST00000523483 HDGFL1Q5TGJ6 251 aa11.99□□□□□ -0.49
SDCBP-212ENST00000523483 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.99□□□□□ -0.49
SDCBP-212ENST00000523483 KCNQ2O43526 872 aa11.98□□□□□ -0.49
SDCBP-212ENST00000523483 ZNF496Q96IT1 587 aaPredicted RBP11.98□□□□□ -0.49
SDCBP-212ENST00000523483 ASAP1Q9ULH1 1129 aa11.98□□□□□ -0.49
SDCBP-212ENST00000523483 PIGBQ92521 554 aa11.98□□□□□ -0.49
SDCBP-212ENST00000523483 STK31Q9BXU1 1019 aa11.98□□□□□ -0.49
SDCBP-212ENST00000523483 C20orf194Q5TEA3 1177 aa11.98□□□□□ -0.49
SDCBP-212ENST00000523483 DISP2A7MBM2 1401 aa11.97□□□□□ -0.49
SDCBP-212ENST00000523483 SLC4A2P04920 1241 aa11.97□□□□□ -0.49
SDCBP-212ENST00000523483 EIF4A1P60842 406 aaKnown RBP11.97□□□□□ -0.49
SDCBP-212ENST00000523483 FTSJ3Q8IY81 847 aaKnown RBP11.97□□□□□ -0.49
SDCBP-212ENST00000523483 ERVV-2B6SEH9 535 aa11.97□□□□□ -0.49
SDCBP-212ENST00000523483 ILDR1Q86SU0 546 aaPredicted RBP11.97□□□□□ -0.49
SDCBP-212ENST00000523483 TNNQ9UQP3 1299 aa11.97□□□□□ -0.49
SDCBP-212ENST00000523483 TNS2Q63HR2 1409 aa11.97□□□□□ -0.49
SDCBP-212ENST00000523483 RXRBP28702 533 aa11.97□□□□□ -0.49
SDCBP-212ENST00000523483 NRAPQ86VF7 1730 aa11.96□□□□□ -0.49
SDCBP-212ENST00000523483 PARP4Q9UKK3 1724 aaKnown RBP11.96□□□□□ -0.49
SDCBP-212ENST00000523483 PANK1Q8TE04 598 aa11.96□□□□□ -0.49
SDCBP-212ENST00000523483 NOB1Q9ULX3 412 aaKnown RBP11.96□□□□□ -0.49
SDCBP-212ENST00000523483 NWD2Q9ULI1 1742 aa11.96□□□□□ -0.49
SDCBP-212ENST00000523483 MYL6BP14649 208 aa11.95□□□□□ -0.5
SDCBP-212ENST00000523483 RBM6P78332 1123 aaKnown RBP11.95□□□□□ -0.5
SDCBP-212ENST00000523483 ZNF428Q96B54 188 aa11.95□□□□□ -0.5
SDCBP-212ENST00000523483 FMNL2Q96PY5 1086 aa11.95□□□□□ -0.5
SDCBP-212ENST00000523483 PTF1AQ7RTS3 328 aa11.95□□□□□ -0.5
SDCBP-212ENST00000523483 AIMP1Q12904 312 aaKnown RBP11.95□□□□□ -0.5
SDCBP-212ENST00000523483 NKX1-1Q15270 411 aaPredicted RBP11.95□□□□□ -0.5
SDCBP-212ENST00000523483 KCNQ4P56696 695 aa11.94□□□□□ -0.5
SDCBP-212ENST00000523483 CCDC30Q5VVM6 783 aa11.94□□□□□ -0.5
SDCBP-212ENST00000523483 POTEAQ6S8J7 498 aa11.94□□□□□ -0.5
SDCBP-212ENST00000523483 SLC4A10Q6U841 1118 aa11.94□□□□□ -0.5
SDCBP-212ENST00000523483 CHPF2Q9P2E5 772 aa11.94□□□□□ -0.5
SDCBP-212ENST00000523483 COG6Q9Y2V7 657 aa11.94□□□□□ -0.5
SDCBP-212ENST00000523483 KRT27Q7Z3Y8 459 aa11.94□□□□□ -0.5
SDCBP-212ENST00000523483 GIGYF1O75420 1035 aaPredicted RBP11.93□□□□□ -0.5
SDCBP-212ENST00000523483 CT47B1P0C2W7 299 aaPredicted RBP11.93□□□□□ -0.5
SDCBP-212ENST00000523483 FKBP5Q13451 457 aaPredicted RBP11.93□□□□□ -0.5
SDCBP-212ENST00000523483 ZKSCAN2Q63HK3 967 aa11.93□□□□□ -0.5
SDCBP-212ENST00000523483 USP16Q9Y5T5 823 aa11.93□□□□□ -0.5
SDCBP-212ENST00000523483 ATRNO75882 1429 aa11.93□□□□□ -0.5
SDCBP-212ENST00000523483 EXOC6Q8TAG9 804 aa11.93□□□□□ -0.5
SDCBP-212ENST00000523483 CRBNQ96SW2 442 aa11.93□□□□□ -0.5
SDCBP-212ENST00000523483 SNRPA1P09661 255 aaKnown RBP11.92□□□□□ -0.5
SDCBP-212ENST00000523483 G2E3Q7L622 706 aa11.92□□□□□ -0.5
SDCBP-212ENST00000523483 ATG3Q9NT62 314 aa11.92□□□□□ -0.5
SDCBP-212ENST00000523483 BABAM1Q9NWV8 329 aa11.92□□□□□ -0.5
SDCBP-212ENST00000523483 ITPRIPQ8IWB1 547 aa11.92□□□□□ -0.5
SDCBP-212ENST00000523483 F6X3S4 739 aa11.92□□□□□ -0.5
SDCBP-212ENST00000523483 IPO8O15397 1037 aaKnown RBP11.92□□□□□ -0.5
SDCBP-212ENST00000523483 RGS17Q9UGC6 210 aaPredicted RBP11.92□□□□□ -0.5
SDCBP-212ENST00000523483 KIF16BQ96L93 1317 aa11.92□□□□□ -0.5
SDCBP-212ENST00000523483 PKD1L3Q7Z443 1732 aa11.92□□□□□ -0.5
SDCBP-212ENST00000523483 GLI3P10071 1580 aa11.91□□□□□ -0.5
SDCBP-212ENST00000523483 TRIM37O94972 964 aa11.91□□□□□ -0.5
SDCBP-212ENST00000523483 TRIM27P14373 513 aa11.91□□□□□ -0.5
SDCBP-212ENST00000523483 MRPL50Q8N5N7 158 aaKnown RBP11.91□□□□□ -0.5
SDCBP-212ENST00000523483 PHAXQ9H814 394 aaKnown RBP11.91□□□□□ -0.5
SDCBP-212ENST00000523483 ALDH1L2Q3SY69 923 aa11.91□□□□□ -0.5
SDCBP-212ENST00000523483 NPM2Q86SE8 214 aaKnown RBP11.91□□□□□ -0.5
SDCBP-212ENST00000523483 DNAJC10Q8IXB1 793 aa11.91□□□□□ -0.5
SDCBP-212ENST00000523483 PROSER3Q2NL68 480 aa11.9□□□□□ -0.5
SDCBP-212ENST00000523483 RLBP1P12271 317 aa11.9□□□□□ -0.5
SDCBP-212ENST00000523483 ATP6V1AP38606 617 aa11.9□□□□□ -0.5
SDCBP-212ENST00000523483 ATF7IPQ6VMQ6 1270 aa11.9□□□□□ -0.5
SDCBP-212ENST00000523483 A1BGP04217 495 aa11.9□□□□□ -0.5
SDCBP-212ENST00000523483 DZIP1LQ8IYY4 767 aaKnown RBP11.9□□□□□ -0.5
SDCBP-212ENST00000523483 FLIIQ13045 1269 aa11.89□□□□□ -0.51
SDCBP-212ENST00000523483 LRRC37A3O60309 1634 aa11.89□□□□□ -0.51
SDCBP-212ENST00000523483 BCL11AQ9H165 835 aa11.89□□□□□ -0.51
SDCBP-212ENST00000523483 PLEKHG2Q9H7P9 1386 aa11.89□□□□□ -0.51
SDCBP-212ENST00000523483 B4GALNT3Q6L9W6 998 aa11.88□□□□□ -0.51
SDCBP-212ENST00000523483 DBF4Q9UBU7 674 aaPredicted RBP11.88□□□□□ -0.51
SDCBP-212ENST00000523483 BCL9O00512 1426 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms