RNA–Protein interactions for RNA: ENST00000523283.5

LINC00534-202, long intergenic non-protein coding RNA 534, humanhuman

TSL 2

Gene LINC00534, Length 772 nt, Biotype lincRNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-202ENST00000523283 POLR3AO14802 1390 aaPredicted RBP8.47□□□□□ -1.05
LINC00534-202ENST00000523283 ROBO2Q9HCK4 1378 aa8.47□□□□□ -1.05
LINC00534-202ENST00000523283 NRXN3Q9Y4C0 1643 aa8.47□□□□□ -1.05
LINC00534-202ENST00000523283 BLMP54132 1417 aaPredicted RBP8.46□□□□□ -1.05
LINC00534-202ENST00000523283 PDE4DQ08499 809 aa8.46□□□□□ -1.06
LINC00534-202ENST00000523283 ANKK1Q8NFD2 765 aa8.46□□□□□ -1.06
LINC00534-202ENST00000523283 SEPT9Q9UHD8 586 aaPredicted RBP8.46□□□□□ -1.06
LINC00534-202ENST00000523283 RIMS1Q86UR5 1692 aaKnown RBP8.46□□□□□ -1.06
LINC00534-202ENST00000523283 PPIP5K1Q6PFW1 1433 aa8.46□□□□□ -1.06
LINC00534-202ENST00000523283 FYB1O15117 783 aa8.45□□□□□ -1.06
LINC00534-202ENST00000523283 IRX6P78412 446 aaPredicted RBP8.45□□□□□ -1.06
LINC00534-202ENST00000523283 ERICH6BQ5W0A0 696 aa8.45□□□□□ -1.06
LINC00534-202ENST00000523283 CCDC146Q8IYE0 955 aa8.45□□□□□ -1.06
LINC00534-202ENST00000523283 KCTD12Q96CX2 325 aaKnown RBP8.45□□□□□ -1.06
LINC00534-202ENST00000523283 HCSTQ9UBK5 93 aa8.45□□□□□ -1.06
LINC00534-202ENST00000523283 SETD1AO15047 1707 aaKnown RBP8.45□□□□□ -1.06
LINC00534-202ENST00000523283 USP32Q8NFA0 1604 aa8.44□□□□□ -1.06
LINC00534-202ENST00000523283 SOWAHBA6NEL2 793 aa8.44□□□□□ -1.06
LINC00534-202ENST00000523283 C3orf80F5H4A9 247 aa8.44□□□□□ -1.06
LINC00534-202ENST00000523283 SMAPO00193 183 aa8.44□□□□□ -1.06
LINC00534-202ENST00000523283 FECHP22830 423 aa8.44□□□□□ -1.06
LINC00534-202ENST00000523283 MAP2K5Q13163 448 aa8.44□□□□□ -1.06
LINC00534-202ENST00000523283 NGEFQ8N5V2 710 aa8.44□□□□□ -1.06
LINC00534-202ENST00000523283 MED14O60244 1454 aa8.44□□□□□ -1.06
LINC00534-202ENST00000523283 ATP7BP35670 1465 aa8.44□□□□□ -1.06
LINC00534-202ENST00000523283 CPS1P31327 1500 aa8.44□□□□□ -1.06
LINC00534-202ENST00000523283 CEP170BQ9Y4F5 1589 aaPredicted RBP8.44□□□□□ -1.06
LINC00534-202ENST00000523283 APAF1O14727 1248 aa8.43□□□□□ -1.06
LINC00534-202ENST00000523283 IRF6O14896 467 aa8.43□□□□□ -1.06
LINC00534-202ENST00000523283 U2AF1L5P0DN76 240 aaPredicted RBP8.43□□□□□ -1.06
LINC00534-202ENST00000523283 DNAJB2P25686 324 aa8.43□□□□□ -1.06
LINC00534-202ENST00000523283 U2AF1Q01081 240 aaKnown RBP eCLIP8.43□□□□□ -1.062e-14■■■□□ 14.7
LINC00534-202ENST00000523283 THSD4Q6ZMP0 1018 aa8.43□□□□□ -1.06
LINC00534-202ENST00000523283 PXYLP1Q8TE99 480 aa8.43□□□□□ -1.06
LINC00534-202ENST00000523283 COG3Q96JB2 828 aa8.43□□□□□ -1.06
LINC00534-202ENST00000523283 PIK3R4Q99570 1358 aa8.43□□□□□ -1.06
LINC00534-202ENST00000523283 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.42□□□□□ -1.06
LINC00534-202ENST00000523283 U2SURPO15042 1029 aaKnown RBP8.42□□□□□ -1.06
LINC00534-202ENST00000523283 PPM1GO15355 546 aaPredicted RBP8.42□□□□□ -1.06
LINC00534-202ENST00000523283 NECTIN2Q92692 538 aa8.42□□□□□ -1.06
LINC00534-202ENST00000523283 RUNDC1Q96C34 613 aa8.42□□□□□ -1.06
LINC00534-202ENST00000523283 LRCH3Q96II8 777 aa8.42□□□□□ -1.06
LINC00534-202ENST00000523283 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.42□□□□□ -1.06
LINC00534-202ENST00000523283 EDC4Q6P2E9 1401 aaKnown RBP8.42□□□□□ -1.06
LINC00534-202ENST00000523283 PTPRUQ92729 1446 aa8.42□□□□□ -1.06
LINC00534-202ENST00000523283 CD163L1Q9NR16 1453 aa8.42□□□□□ -1.06
LINC00534-202ENST00000523283 DIP2AQ14689 1571 aa8.42□□□□□ -1.06
LINC00534-202ENST00000523283 KNDC1Q76NI1 1749 aa8.42□□□□□ -1.06
LINC00534-202ENST00000523283 SETD1BQ9UPS6 1966 aaKnown RBP8.41□□□□□ -1.06
LINC00534-202ENST00000523283 ADAMTSL3P82987 1691 aa8.41□□□□□ -1.06
LINC00534-202ENST00000523283 PTCH1Q13635 1447 aa8.41□□□□□ -1.06
LINC00534-202ENST00000523283 PLEKHG3A1L390 1219 aa8.41□□□□□ -1.06
LINC00534-202ENST00000523283 KCNA6P17658 529 aa8.41□□□□□ -1.06
LINC00534-202ENST00000523283 SLC4A3P48751 1232 aa8.41□□□□□ -1.06
LINC00534-202ENST00000523283 NYAP1Q6ZVC0 841 aa8.41□□□□□ -1.06
LINC00534-202ENST00000523283 METTL3Q86U44 580 aaKnown RBP8.41□□□□□ -1.06
LINC00534-202ENST00000523283 NME9Q86XW9 330 aa8.41□□□□□ -1.06
LINC00534-202ENST00000523283 NGDNQ8NEJ9 315 aaKnown RBP8.41□□□□□ -1.06
LINC00534-202ENST00000523283 PNNQ9H307 717 aaKnown RBP8.41□□□□□ -1.06
LINC00534-202ENST00000523283 RCAN3Q9UKA8 241 aa8.41□□□□□ -1.06
LINC00534-202ENST00000523283 ACEP12821 1306 aa8.4□□□□□ -1.06
LINC00534-202ENST00000523283 PRR36Q9H6K5 1346 aa8.4□□□□□ -1.06
LINC00534-202ENST00000523283 RCCD1A6NED2 376 aa8.4□□□□□ -1.06
LINC00534-202ENST00000523283 DIAPH1O60610 1272 aaKnown RBP8.4□□□□□ -1.06
LINC00534-202ENST00000523283 SAMD7Q7Z3H4 446 aa8.4□□□□□ -1.06
LINC00534-202ENST00000523283 PPP4R2Q9NY27 417 aa8.4□□□□□ -1.06
LINC00534-202ENST00000523283 CPSF1Q10570 1443 aaKnown RBP8.39□□□□□ -1.07
LINC00534-202ENST00000523283 NEFMP07197 916 aa8.39□□□□□ -1.07
LINC00534-202ENST00000523283 SLF2Q8IX21 1173 aa8.39□□□□□ -1.07
LINC00534-202ENST00000523283 TMEM134Q9H6X4 195 aa8.39□□□□□ -1.07
LINC00534-202ENST00000523283 TSR3Q9UJK0 312 aaKnown RBP8.39□□□□□ -1.07
LINC00534-202ENST00000523283 NPHP4O75161 1426 aaPredicted RBP8.38□□□□□ -1.07
LINC00534-202ENST00000523283 TTC21BQ7Z4L5 1316 aa8.38□□□□□ -1.07
LINC00534-202ENST00000523283 MAPK8IP3Q9UPT6 1336 aa8.38□□□□□ -1.07
LINC00534-202ENST00000523283 E9PSI1 815 aa8.38□□□□□ -1.07
LINC00534-202ENST00000523283 FAM161AQ3B820 660 aa8.38□□□□□ -1.07
LINC00534-202ENST00000523283 TCP11L2Q8N4U5 519 aa8.38□□□□□ -1.07
LINC00534-202ENST00000523283 PMFBP1Q8TBY8 1022 aa8.38□□□□□ -1.07
LINC00534-202ENST00000523283 POLKQ9UBT6 870 aa8.38□□□□□ -1.07
LINC00534-202ENST00000523283 CDC42BPGQ6DT37 1551 aa8.38□□□□□ -1.07
LINC00534-202ENST00000523283 RNF123Q5XPI4 1314 aa8.37□□□□□ -1.07
LINC00534-202ENST00000523283 ZNF521Q96K83 1311 aa8.37□□□□□ -1.07
LINC00534-202ENST00000523283 ADGRB2O60241 1585 aa8.37□□□□□ -1.07
LINC00534-202ENST00000523283 RRP1P56182 461 aaKnown RBP8.37□□□□□ -1.07
LINC00534-202ENST00000523283 PPP4CP60510 307 aa8.37□□□□□ -1.07
LINC00534-202ENST00000523283 SLFN5Q08AF3 891 aa8.37□□□□□ -1.07
LINC00534-202ENST00000523283 FAM117AQ9C073 453 aa8.37□□□□□ -1.07
LINC00534-202ENST00000523283 RRP7AQ9Y3A4 280 aaKnown RBP8.37□□□□□ -1.07
LINC00534-202ENST00000523283 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.37□□□□□ -1.07
LINC00534-202ENST00000523283 TTC21AQ8NDW8 1320 aa8.36□□□□□ -1.07
LINC00534-202ENST00000523283 PTPN5P54829 565 aa8.36□□□□□ -1.07
LINC00534-202ENST00000523283 SWT1Q5T5J6 900 aaKnown RBP8.36□□□□□ -1.07
LINC00534-202ENST00000523283 DDRGK1Q96HY6 314 aa8.36□□□□□ -1.07
LINC00534-202ENST00000523283 ZNF142P52746 1687 aaPredicted RBP8.36□□□□□ -1.07
LINC00534-202ENST00000523283 FBLN1P23142 703 aa8.35□□□□□ -1.07
LINC00534-202ENST00000523283 BCAMP50895 628 aa8.35□□□□□ -1.07
LINC00534-202ENST00000523283 DUSP27Q5VZP5 1158 aa8.35□□□□□ -1.07
LINC00534-202ENST00000523283 PROSER2Q86WR7 435 aaPredicted RBP8.35□□□□□ -1.07
LINC00534-202ENST00000523283 WDR63Q8IWG1 891 aa8.35□□□□□ -1.07
LINC00534-202ENST00000523283 WWC1Q8IX03 1113 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms