RNA–Protein interactions for RNA: ENST00000523215.1

ERGIC1-211, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 3,621 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-211ENST00000523215 LAMA4Q16363 1823 aa13.02□□□□□ -0.32
ERGIC1-211ENST00000523215 CALD1Q05682 793 aaKnown RBP13.02□□□□□ -0.33
ERGIC1-211ENST00000523215 TMEM2Q9UHN6 1383 aa13.02□□□□□ -0.33
ERGIC1-211ENST00000523215 MRE11P49959 708 aa13.02□□□□□ -0.33
ERGIC1-211ENST00000523215 CHL1O00533 1208 aa13.01□□□□□ -0.33
ERGIC1-211ENST00000523215 NOB1Q9ULX3 412 aaKnown RBP13.01□□□□□ -0.33
ERGIC1-211ENST00000523215 ARAP2Q8WZ64 1704 aa13□□□□□ -0.33
ERGIC1-211ENST00000523215 CEMIPQ8WUJ3 1361 aa13□□□□□ -0.33
ERGIC1-211ENST00000523215 PHACTR3Q96KR7 559 aa13□□□□□ -0.33
ERGIC1-211ENST00000523215 SNRKQ9NRH2 765 aa13□□□□□ -0.33
ERGIC1-211ENST00000523215 SKOR2Q2VWA4 1001 aaPredicted RBP13□□□□□ -0.33
ERGIC1-211ENST00000523215 ARFGEF2Q9Y6D5 1785 aa13□□□□□ -0.33
ERGIC1-211ENST00000523215 NHSL1Q5SYE7 1610 aa13□□□□□ -0.33
ERGIC1-211ENST00000523215 IPO8O15397 1037 aaKnown RBP13□□□□□ -0.33
ERGIC1-211ENST00000523215 GSPT1P15170 499 aaKnown RBP13□□□□□ -0.33
ERGIC1-211ENST00000523215 ARID3AQ99856 593 aa13□□□□□ -0.33
ERGIC1-211ENST00000523215 HSP90AB1P08238 724 aaKnown RBP12.99□□□□□ -0.33
ERGIC1-211ENST00000523215 NCKAP5LQ9HCH0 1330 aa12.99□□□□□ -0.33
ERGIC1-211ENST00000523215 ZRANB1Q9UGI0 708 aa12.99□□□□□ -0.33
ERGIC1-211ENST00000523215 COL15A1P39059 1388 aa12.99□□□□□ -0.33
ERGIC1-211ENST00000523215 DIAPH1O60610 1272 aaKnown RBP12.99□□□□□ -0.33
ERGIC1-211ENST00000523215 KCNB2Q92953 911 aa12.99□□□□□ -0.33
ERGIC1-211ENST00000523215 PRR36Q9H6K5 1346 aa12.98□□□□□ -0.33
ERGIC1-211ENST00000523215 HTATSF1O43719 755 aaKnown RBP12.98□□□□□ -0.33
ERGIC1-211ENST00000523215 CUL4AQ13619 759 aa12.98□□□□□ -0.33
ERGIC1-211ENST00000523215 ANKRD44Q8N8A2 993 aa12.98□□□□□ -0.33
ERGIC1-211ENST00000523215 TMEM87AQ8NBN3 555 aa12.98□□□□□ -0.33
ERGIC1-211ENST00000523215 TTC21BQ7Z4L5 1316 aa12.98□□□□□ -0.33
ERGIC1-211ENST00000523215 U2SURPO15042 1029 aaKnown RBP12.98□□□□□ -0.33
ERGIC1-211ENST00000523215 ABCA3Q99758 1704 aa12.98□□□□□ -0.33
ERGIC1-211ENST00000523215 CANXP27824 592 aaKnown RBP12.98□□□□□ -0.33
ERGIC1-211ENST00000523215 RIPK4P57078 832 aa12.98□□□□□ -0.33
ERGIC1-211ENST00000523215 STAP2Q9UGK3 403 aa12.97□□□□□ -0.33
ERGIC1-211ENST00000523215 KLHL40Q2TBA0 621 aa12.97□□□□□ -0.33
ERGIC1-211ENST00000523215 PLEKHM2Q8IWE5 1019 aa12.97□□□□□ -0.33
ERGIC1-211ENST00000523215 EMILIN1Q9Y6C2 1016 aa12.97□□□□□ -0.33
ERGIC1-211ENST00000523215 ROBO2Q9HCK4 1378 aa12.96□□□□□ -0.33
ERGIC1-211ENST00000523215 IGSF1Q8N6C5 1336 aa12.96□□□□□ -0.33
ERGIC1-211ENST00000523215 GNAI1P63096 354 aa12.96□□□□□ -0.33
ERGIC1-211ENST00000523215 WASLO00401 505 aaPredicted RBP12.96□□□□□ -0.34
ERGIC1-211ENST00000523215 RREB1Q92766 1687 aa12.96□□□□□ -0.34
ERGIC1-211ENST00000523215 CC2D2BQ6DHV5 1058 aa12.95□□□□□ -0.34
ERGIC1-211ENST00000523215 ECM29Q5VYK3 1845 aa12.95□□□□□ -0.34
ERGIC1-211ENST00000523215 WNK3Q9BYP7 1800 aa12.95□□□□□ -0.34
ERGIC1-211ENST00000523215 MSH6P52701 1360 aa12.95□□□□□ -0.34
ERGIC1-211ENST00000523215 HDGFL2Q7Z4V5 671 aaPredicted RBP12.95□□□□□ -0.34
ERGIC1-211ENST00000523215 NME9Q86XW9 330 aa12.95□□□□□ -0.34
ERGIC1-211ENST00000523215 SMC4Q9NTJ3 1288 aa12.95□□□□□ -0.34
ERGIC1-211ENST00000523215 RPAP1Q9BWH6 1393 aaPredicted RBP12.95□□□□□ -0.34
ERGIC1-211ENST00000523215 PRKAR2BP31323 418 aa12.95□□□□□ -0.34
ERGIC1-211ENST00000523215 TTC22Q5TAA0 569 aa12.95□□□□□ -0.34
ERGIC1-211ENST00000523215 USP26Q9BXU7 913 aa12.95□□□□□ -0.34
ERGIC1-211ENST00000523215 TTC21AQ8NDW8 1320 aa12.95□□□□□ -0.34
ERGIC1-211ENST00000523215 MBIPQ9NS73 344 aa12.94□□□□□ -0.34
ERGIC1-211ENST00000523215 CD2BP2O95400 341 aaKnown RBP12.94□□□□□ -0.34
ERGIC1-211ENST00000523215 LMOD3Q0VAK6 560 aa12.94□□□□□ -0.34
ERGIC1-211ENST00000523215 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.94□□□□□ -0.34
ERGIC1-211ENST00000523215 TSPYL6Q8N831 410 aa12.94□□□□□ -0.34
ERGIC1-211ENST00000523215 ERBB4Q15303 1308 aa12.94□□□□□ -0.34
ERGIC1-211ENST00000523215 ZNF500O60304 480 aaPredicted RBP12.94□□□□□ -0.34
ERGIC1-211ENST00000523215 TBC1D9Q6ZT07 1266 aa12.94□□□□□ -0.34
ERGIC1-211ENST00000523215 TNPO1Q92973 898 aaKnown RBP12.93□□□□□ -0.34
ERGIC1-211ENST00000523215 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.93□□□□□ -0.34
ERGIC1-211ENST00000523215 RPAP2Q8IXW5 612 aaPredicted RBP12.93□□□□□ -0.34
ERGIC1-211ENST00000523215 K7ELQ4 463 aaPredicted RBP12.93□□□□□ -0.34
ERGIC1-211ENST00000523215 THUMPD2Q9BTF0 503 aaKnown RBP12.93□□□□□ -0.34
ERGIC1-211ENST00000523215 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.92□□□□□ -0.34
ERGIC1-211ENST00000523215 TRAK2O60296 914 aa12.92□□□□□ -0.34
ERGIC1-211ENST00000523215 ANAPC15P60006 121 aa12.92□□□□□ -0.34
ERGIC1-211ENST00000523215 CWC22Q9HCG8 908 aaKnown RBP12.92□□□□□ -0.34
ERGIC1-211ENST00000523215 MMP14P50281 582 aa12.91□□□□□ -0.34
ERGIC1-211ENST00000523215 API5Q9BZZ5 524 aaKnown RBP12.91□□□□□ -0.34
ERGIC1-211ENST00000523215 ZDHHC9Q9Y397 364 aa12.91□□□□□ -0.34
ERGIC1-211ENST00000523215 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.91□□□□□ -0.34
ERGIC1-211ENST00000523215 HMOX1P09601 288 aa12.9□□□□□ -0.34
ERGIC1-211ENST00000523215 RGS22Q8NE09 1264 aa12.9□□□□□ -0.34
ERGIC1-211ENST00000523215 GRPEL1Q9HAV7 217 aa12.9□□□□□ -0.34
ERGIC1-211ENST00000523215 PLCH1Q4KWH8 1693 aa12.9□□□□□ -0.34
ERGIC1-211ENST00000523215 RABEP1Q15276 862 aa12.9□□□□□ -0.34
ERGIC1-211ENST00000523215 GAS2L3Q86XJ1 694 aa12.9□□□□□ -0.34
ERGIC1-211ENST00000523215 INTS4Q96HW7 963 aaKnown RBP12.9□□□□□ -0.34
ERGIC1-211ENST00000523215 CEP85Q6P2H3 762 aa12.9□□□□□ -0.34
ERGIC1-211ENST00000523215 RGPD5Q99666 1765 aa12.9□□□□□ -0.35
ERGIC1-211ENST00000523215 C4AP0C0L4 1744 aa12.89□□□□□ -0.35
ERGIC1-211ENST00000523215 C4BP0C0L5 1744 aa12.89□□□□□ -0.35
ERGIC1-211ENST00000523215 TXNDC2Q86VQ3 553 aa12.89□□□□□ -0.35
ERGIC1-211ENST00000523215 NUDT16Q96DE0 195 aaKnown RBP12.89□□□□□ -0.35
ERGIC1-211ENST00000523215 ZNF830Q96NB3 372 aaPredicted RBP12.89□□□□□ -0.35
ERGIC1-211ENST00000523215 PSMD1Q99460 953 aa12.89□□□□□ -0.35
ERGIC1-211ENST00000523215 UPF2Q9HAU5 1272 aaKnown RBP12.89□□□□□ -0.35
ERGIC1-211ENST00000523215 MCM5P33992 734 aa12.89□□□□□ -0.35
ERGIC1-211ENST00000523215 ITPRIPQ8IWB1 547 aa12.89□□□□□ -0.35
ERGIC1-211ENST00000523215 PLCD4Q9BRC7 762 aa12.89□□□□□ -0.35
ERGIC1-211ENST00000523215 LMBRD1Q9NUN5 540 aa12.89□□□□□ -0.35
ERGIC1-211ENST00000523215 LRP5O75197 1615 aa12.89□□□□□ -0.35
ERGIC1-211ENST00000523215 A0A1B0GUL6 1792 aa12.89□□□□□ -0.35
ERGIC1-211ENST00000523215 XIRP1Q702N8 1843 aaKnown RBP12.89□□□□□ -0.35
ERGIC1-211ENST00000523215 CDC45O75419 566 aa12.88□□□□□ -0.35
ERGIC1-211ENST00000523215 LAMB2P55268 1798 aa12.88□□□□□ -0.35
ERGIC1-211ENST00000523215 AFDNP55196 1824 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms