RNA–Protein interactions for RNA: ENST00000523190.5

PVT1-217, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 443 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-217ENST00000523190 TWISTNBQ3B726 338 aaPredicted RBP8.66□□□□□ -1.02
PVT1-217ENST00000523190 C20orf194Q5TEA3 1177 aa8.66□□□□□ -1.02
PVT1-217ENST00000523190 IFNL2Q8IZJ0 200 aa8.66□□□□□ -1.02
PVT1-217ENST00000523190 SSH1Q8WYL5 1049 aa8.66□□□□□ -1.02
PVT1-217ENST00000523190 SMC4Q9NTJ3 1288 aa8.66□□□□□ -1.02
PVT1-217ENST00000523190 SCN11AQ9UI33 1791 aa8.66□□□□□ -1.02
PVT1-217ENST00000523190 PCDH11XQ9BZA7 1347 aa8.65□□□□□ -1.02
PVT1-217ENST00000523190 PCDH11YQ9BZA8 1340 aa8.65□□□□□ -1.02
PVT1-217ENST00000523190 VAMP4O75379 141 aa8.65□□□□□ -1.02
PVT1-217ENST00000523190 EXOC6Q8TAG9 804 aa8.65□□□□□ -1.02
PVT1-217ENST00000523190 ZCRB1Q8TBF4 217 aaKnown RBP8.65□□□□□ -1.02
PVT1-217ENST00000523190 FRAT1Q92837 279 aaPredicted RBP8.65□□□□□ -1.02
PVT1-217ENST00000523190 C8orf37Q96NL8 207 aa8.65□□□□□ -1.02
PVT1-217ENST00000523190 CRBNQ96SW2 442 aa8.65□□□□□ -1.02
PVT1-217ENST00000523190 SIPA1L3O60292 1781 aaPredicted RBP8.65□□□□□ -1.02
PVT1-217ENST00000523190 KDM3BQ7LBC6 1761 aa8.65□□□□□ -1.02
PVT1-217ENST00000523190 TCERG1O14776 1098 aaKnown RBP8.64□□□□□ -1.03
PVT1-217ENST00000523190 VASPP50552 380 aaPredicted RBP8.64□□□□□ -1.03
PVT1-217ENST00000523190 ALDH1L2Q3SY69 923 aa8.64□□□□□ -1.03
PVT1-217ENST00000523190 ERICH6BQ5W0A0 696 aa8.64□□□□□ -1.03
PVT1-217ENST00000523190 BABAM1Q9NWV8 329 aa8.64□□□□□ -1.03
PVT1-217ENST00000523190 TNNQ9UQP3 1299 aa8.64□□□□□ -1.03
PVT1-217ENST00000523190 MRC1P22897 1456 aa8.64□□□□□ -1.03
PVT1-217ENST00000523190 SPATA31A1Q5TZJ5 1347 aa8.63□□□□□ -1.03
PVT1-217ENST00000523190 BTBD11A6QL63 1104 aa8.63□□□□□ -1.03
PVT1-217ENST00000523190 KCNQ3O43525 872 aa8.63□□□□□ -1.03
PVT1-217ENST00000523190 HSP90AB1P08238 724 aaKnown RBP8.63□□□□□ -1.03
PVT1-217ENST00000523190 ZNF428Q96B54 188 aa8.63□□□□□ -1.03
PVT1-217ENST00000523190 NGLY1Q96IV0 654 aa8.63□□□□□ -1.03
PVT1-217ENST00000523190 DCAF5Q96JK2 942 aa8.63□□□□□ -1.03
PVT1-217ENST00000523190 CCDC9Q9Y3X0 531 aaKnown RBP8.63□□□□□ -1.03
PVT1-217ENST00000523190 BCL9LQ86UU0 1499 aa8.63□□□□□ -1.03
PVT1-217ENST00000523190 TNS2Q63HR2 1409 aa8.63□□□□□ -1.03
PVT1-217ENST00000523190 SPATA31A5Q5VU36 1347 aa8.62□□□□□ -1.03
PVT1-217ENST00000523190 SPATA31A7Q8IWB4 1347 aa8.62□□□□□ -1.03
PVT1-217ENST00000523190 KIF16BQ96L93 1317 aa8.62□□□□□ -1.03
PVT1-217ENST00000523190 MEX3CQ5U5Q3 659 aaKnown RBP8.62□□□□□ -1.03
PVT1-217ENST00000523190 ZKSCAN2Q63HK3 967 aa8.62□□□□□ -1.03
PVT1-217ENST00000523190 UNC5CLQ8IV45 518 aa8.62□□□□□ -1.03
PVT1-217ENST00000523190 PROM2Q8N271 834 aa8.62□□□□□ -1.03
PVT1-217ENST00000523190 MRPL50Q8N5N7 158 aaKnown RBP8.62□□□□□ -1.03
PVT1-217ENST00000523190 DDX54Q8TDD1 881 aaKnown RBP8.62□□□□□ -1.03
PVT1-217ENST00000523190 SLC52A2Q9HAB3 445 aa8.62□□□□□ -1.03
PVT1-217ENST00000523190 PPP4R2Q9NY27 417 aa8.62□□□□□ -1.03
PVT1-217ENST00000523190 TOGARAM1Q9Y4F4 1720 aa8.62□□□□□ -1.03
PVT1-217ENST00000523190 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.61□□□□□ -1.03
PVT1-217ENST00000523190 CABP4P57796 275 aa8.61□□□□□ -1.03
PVT1-217ENST00000523190 EIF4A1P60842 406 aaKnown RBP8.61□□□□□ -1.03
PVT1-217ENST00000523190 PDE3AQ14432 1141 aa8.61□□□□□ -1.03
PVT1-217ENST00000523190 PANK1Q8TE04 598 aa8.61□□□□□ -1.03
PVT1-217ENST00000523190 CLUAP1Q96AJ1 413 aa8.61□□□□□ -1.03
PVT1-217ENST00000523190 NOB1Q9ULX3 412 aaKnown RBP8.61□□□□□ -1.03
PVT1-217ENST00000523190 THRAP3Q9Y2W1 955 aaKnown RBP8.61□□□□□ -1.03
PVT1-217ENST00000523190 RLBP1P12271 317 aa8.6□□□□□ -1.03
PVT1-217ENST00000523190 TRIM27P14373 513 aa8.6□□□□□ -1.03
PVT1-217ENST00000523190 BRPF1P55201 1214 aaPredicted RBP8.6□□□□□ -1.03
PVT1-217ENST00000523190 SLC39A6Q13433 755 aa8.6□□□□□ -1.03
PVT1-217ENST00000523190 NKX1-1Q15270 411 aaPredicted RBP8.6□□□□□ -1.03
PVT1-217ENST00000523190 VPS72Q15906 364 aa8.6□□□□□ -1.03
PVT1-217ENST00000523190 B4GALNT3Q6L9W6 998 aa8.6□□□□□ -1.03
PVT1-217ENST00000523190 FNBP4Q8N3X1 1017 aaPredicted RBP8.6□□□□□ -1.03
PVT1-217ENST00000523190 NFATC2IPQ8NCF5 419 aa8.6□□□□□ -1.03
PVT1-217ENST00000523190 NECTIN2Q92692 538 aa8.6□□□□□ -1.03
PVT1-217ENST00000523190 USP21Q9UK80 565 aa8.6□□□□□ -1.03
PVT1-217ENST00000523190 COG6Q9Y2V7 657 aa8.6□□□□□ -1.03
PVT1-217ENST00000523190 AFF2P51816 1311 aa8.59□□□□□ -1.03
PVT1-217ENST00000523190 PAPPAQ13219 1627 aa8.59□□□□□ -1.03
PVT1-217ENST00000523190 EXOC5O00471 708 aa8.59□□□□□ -1.03
PVT1-217ENST00000523190 ATF7IPQ6VMQ6 1270 aa8.59□□□□□ -1.03
PVT1-217ENST00000523190 BARGINQ6ZT62 677 aa8.59□□□□□ -1.03
PVT1-217ENST00000523190 DZIP1LQ8IYY4 767 aaKnown RBP8.59□□□□□ -1.03
PVT1-217ENST00000523190 CDCA7Q9BWT1 371 aaPredicted RBP8.59□□□□□ -1.03
PVT1-217ENST00000523190 ZBTB12Q9Y330 459 aaPredicted RBP8.59□□□□□ -1.03
PVT1-217ENST00000523190 SOS1Q07889 1333 aaPredicted RBP8.58□□□□□ -1.04
PVT1-217ENST00000523190 GLI3P10071 1580 aa8.58□□□□□ -1.04
PVT1-217ENST00000523190 PRAMEF22A3QJZ6 481 aa8.58□□□□□ -1.04
PVT1-217ENST00000523190 ERVV-2B6SEH9 535 aa8.58□□□□□ -1.04
PVT1-217ENST00000523190 IPO8O15397 1037 aaKnown RBP8.58□□□□□ -1.04
PVT1-217ENST00000523190 HOXB7P09629 217 aa8.58□□□□□ -1.04
PVT1-217ENST00000523190 DDB1Q16531 1140 aa8.58□□□□□ -1.04
PVT1-217ENST00000523190 FAM98CQ17RN3 349 aaKnown RBP8.58□□□□□ -1.04
PVT1-217ENST00000523190 HDGFL1Q5TGJ6 251 aa8.58□□□□□ -1.04
PVT1-217ENST00000523190 CCDC30Q5VVM6 783 aa8.58□□□□□ -1.04
PVT1-217ENST00000523190 ZNF790Q6PG37 636 aa8.58□□□□□ -1.04
PVT1-217ENST00000523190 FTSJ3Q8IY81 847 aaKnown RBP8.58□□□□□ -1.04
PVT1-217ENST00000523190 C5P01031 1676 aa8.58□□□□□ -1.04
PVT1-217ENST00000523190 HEG1Q9ULI3 1381 aa8.58□□□□□ -1.04
PVT1-217ENST00000523190 DOT1LQ8TEK3 1739 aa8.57□□□□□ -1.04
PVT1-217ENST00000523190 MS4A1P11836 297 aa8.57□□□□□ -1.04
PVT1-217ENST00000523190 EIF2S2P20042 333 aaKnown RBP8.57□□□□□ -1.04
PVT1-217ENST00000523190 MVPQ14764 893 aaKnown RBP8.57□□□□□ -1.04
PVT1-217ENST00000523190 G2E3Q7L622 706 aa8.57□□□□□ -1.04
PVT1-217ENST00000523190 TTC5Q8N0Z6 440 aa8.57□□□□□ -1.04
PVT1-217ENST00000523190 TMEM57Q8N5G2 664 aa8.57□□□□□ -1.04
PVT1-217ENST00000523190 CCDC136Q96JN2 1154 aa8.57□□□□□ -1.04
PVT1-217ENST00000523190 STK31Q9BXU1 1019 aa8.57□□□□□ -1.04
PVT1-217ENST00000523190 THSD7AQ9UPZ6 1657 aa8.56□□□□□ -1.04
PVT1-217ENST00000523190 RGS12O14924 1447 aa8.56□□□□□ -1.04
PVT1-217ENST00000523190 ATRNO75882 1429 aa8.56□□□□□ -1.04
PVT1-217ENST00000523190 KCPQ6ZWJ8 1503 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms